RNA–Protein interactions for RNA: ENST00000572405.5

TOM1L1-213, Transcript of target of myb1 like 1 membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene TOM1L1, Length 2,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOM1L1-213ENST00000572405 ERVK-7P63135 1459 aa16.75■□□□□ 0.27
TOM1L1-213ENST00000572405 PPLO60437 1756 aa16.75■□□□□ 0.27
TOM1L1-213ENST00000572405 PPP6R1Q9UPN7 881 aa16.74■□□□□ 0.27
TOM1L1-213ENST00000572405 IDI1Q13907 227 aa16.73■□□□□ 0.27
TOM1L1-213ENST00000572405 NRXN1Q9ULB1 1477 aa16.73■□□□□ 0.27
TOM1L1-213ENST00000572405 IQGAP1P46940 1657 aa16.73■□□□□ 0.27
TOM1L1-213ENST00000572405 KIAA1210Q9ULL0 1709 aa16.72■□□□□ 0.27
TOM1L1-213ENST00000572405 ARID4BQ4LE39 1312 aaPredicted RBP16.72■□□□□ 0.27
TOM1L1-213ENST00000572405 CFAP70Q5T0N1 1121 aa16.7■□□□□ 0.26
TOM1L1-213ENST00000572405 SLC52A1Q9NWF4 448 aa16.7■□□□□ 0.26
TOM1L1-213ENST00000572405 MYO5BQ9ULV0 1848 aa16.7■□□□□ 0.26
TOM1L1-213ENST00000572405 NEXMIFQ5QGS0 1516 aa16.7■□□□□ 0.26
TOM1L1-213ENST00000572405 PIK3C2GO75747 1445 aa16.69■□□□□ 0.26
TOM1L1-213ENST00000572405 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
TOM1L1-213ENST00000572405 SCAF11Q99590 1463 aaKnown RBP16.69■□□□□ 0.26
TOM1L1-213ENST00000572405 NUTM2DQ5VT03 806 aaPredicted RBP16.68■□□□□ 0.26
TOM1L1-213ENST00000572405 TESK2Q96S53 571 aa16.68■□□□□ 0.26
TOM1L1-213ENST00000572405 SPATA31D1Q6ZQQ2 1576 aa16.68■□□□□ 0.26
TOM1L1-213ENST00000572405 RPGRIP1LQ68CZ1 1315 aa16.68■□□□□ 0.26
TOM1L1-213ENST00000572405 ESF1Q9H501 851 aaKnown RBP16.67■□□□□ 0.26
TOM1L1-213ENST00000572405 DISP3Q9P2K9 1392 aa16.66■□□□□ 0.26
TOM1L1-213ENST00000572405 ZMYM3Q14202 1370 aa16.65■□□□□ 0.26
TOM1L1-213ENST00000572405 CENPBP07199 599 aaPredicted RBP16.64■□□□□ 0.25
TOM1L1-213ENST00000572405 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
TOM1L1-213ENST00000572405 SETBP1Q9Y6X0 1596 aa16.62■□□□□ 0.25
TOM1L1-213ENST00000572405 EIF3AQ14152 1382 aaKnown RBP16.62■□□□□ 0.25
TOM1L1-213ENST00000572405 ADGRB1O14514 1584 aa16.61■□□□□ 0.25
TOM1L1-213ENST00000572405 VGFO15240 615 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-213ENST00000572405 SENP3Q9H4L4 574 aaPredicted RBP16.61■□□□□ 0.25
TOM1L1-213ENST00000572405 C14orf93Q9H972 538 aaKnown RBP16.61■□□□□ 0.25
TOM1L1-213ENST00000572405 STAG3Q9UJ98 1225 aa16.61■□□□□ 0.25
TOM1L1-213ENST00000572405 TMF1P82094 1093 aa16.6■□□□□ 0.25
TOM1L1-213ENST00000572405 PRKRIP1Q9H875 184 aaPredicted RBP16.59■□□□□ 0.25
TOM1L1-213ENST00000572405 A2ML1A8K2U0 1454 aa16.59■□□□□ 0.25
TOM1L1-213ENST00000572405 ZFYVE9O95405 1425 aa16.58■□□□□ 0.25
TOM1L1-213ENST00000572405 TMEM132EQ6IEE7 984 aa16.58■□□□□ 0.24
TOM1L1-213ENST00000572405 CNGB1Q14028 1251 aaPredicted RBP16.57■□□□□ 0.24
TOM1L1-213ENST00000572405 TNRQ92752 1358 aa16.56■□□□□ 0.24
TOM1L1-213ENST00000572405 MYO3AQ8NEV4 1616 aa16.56■□□□□ 0.24
TOM1L1-213ENST00000572405 TRAK1Q9UPV9 953 aa16.55■□□□□ 0.24
TOM1L1-213ENST00000572405 FER1L4A9Z1Z3 1794 aa16.54■□□□□ 0.24
TOM1L1-213ENST00000572405 ASXL1Q8IXJ9 1541 aa16.54■□□□□ 0.24
TOM1L1-213ENST00000572405 CEBPAP49715 358 aaPredicted RBP16.53■□□□□ 0.24
TOM1L1-213ENST00000572405 RIMS2Q9UQ26 1411 aa16.53■□□□□ 0.24
TOM1L1-213ENST00000572405 CCDC184Q52MB2 194 aa16.52■□□□□ 0.23
TOM1L1-213ENST00000572405 CENPJQ9HC77 1338 aaPredicted RBP16.52■□□□□ 0.23
TOM1L1-213ENST00000572405 C3P01024 1663 aa16.51■□□□□ 0.23
TOM1L1-213ENST00000572405 QRICH2Q9H0J4 1663 aa16.51■□□□□ 0.23
TOM1L1-213ENST00000572405 ARHGEF28Q8N1W1 1705 aaKnown RBP16.51■□□□□ 0.23
TOM1L1-213ENST00000572405 PLPPR3Q6T4P5 718 aa16.5■□□□□ 0.23
TOM1L1-213ENST00000572405 KDM5AP29375 1690 aaKnown RBP16.5■□□□□ 0.23
TOM1L1-213ENST00000572405 ALKQ9UM73 1620 aa16.49■□□□□ 0.23
TOM1L1-213ENST00000572405 SBNO2Q9Y2G9 1366 aa16.49■□□□□ 0.23
TOM1L1-213ENST00000572405 MYOM1P52179 1685 aa16.49■□□□□ 0.23
TOM1L1-213ENST00000572405 UBR1Q8IWV7 1749 aa16.48■□□□□ 0.23
TOM1L1-213ENST00000572405 CDCA8Q53HL2 280 aa16.48■□□□□ 0.23
TOM1L1-213ENST00000572405 PANK3Q9H999 370 aa16.48■□□□□ 0.23
TOM1L1-213ENST00000572405 STK26Q9P289 416 aa16.47■□□□□ 0.23
TOM1L1-213ENST00000572405 PER1O15534 1290 aaPredicted RBP16.46■□□□□ 0.23
TOM1L1-213ENST00000572405 MRS2Q9HD23 443 aa16.46■□□□□ 0.23
TOM1L1-213ENST00000572405 PTPRMP28827 1452 aa16.45■□□□□ 0.22
TOM1L1-213ENST00000572405 NLRP1Q9C000 1473 aa16.45■□□□□ 0.22
TOM1L1-213ENST00000572405 YTHDC2Q9H6S0 1430 aaKnown RBP16.44■□□□□ 0.22
TOM1L1-213ENST00000572405 NRXN3Q9Y4C0 1643 aa16.44■□□□□ 0.22
TOM1L1-213ENST00000572405 SETD1AO15047 1707 aaKnown RBP16.44■□□□□ 0.22
TOM1L1-213ENST00000572405 TMEM2Q9UHN6 1383 aa16.43■□□□□ 0.22
TOM1L1-213ENST00000572405 SLC24A1O60721 1099 aa16.43■□□□□ 0.22
TOM1L1-213ENST00000572405 SAFB2Q14151 953 aaKnown RBP eCLIP16.43■□□□□ 0.22
TOM1L1-213ENST00000572405 KTN1Q86UP2 1357 aaKnown RBP16.42■□□□□ 0.22
TOM1L1-213ENST00000572405 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.42■□□□□ 0.22
TOM1L1-213ENST00000572405 RIMS1Q86UR5 1692 aaKnown RBP16.42■□□□□ 0.22
TOM1L1-213ENST00000572405 TULP4Q9NRJ4 1543 aa16.41■□□□□ 0.22
TOM1L1-213ENST00000572405 CC2D1BQ5T0F9 858 aaKnown RBP16.41■□□□□ 0.22
TOM1L1-213ENST00000572405 PARD3Q8TEW0 1356 aa16.4■□□□□ 0.22
TOM1L1-213ENST00000572405 RALBP1Q15311 655 aa16.4■□□□□ 0.22
TOM1L1-213ENST00000572405 FAM9BQ8IZU0 186 aa16.39■□□□□ 0.21
TOM1L1-213ENST00000572405 PRAM1Q96QH2 718 aa16.39■□□□□ 0.21
TOM1L1-213ENST00000572405 MYBBP1AQ9BQG0 1328 aaKnown RBP16.38■□□□□ 0.21
TOM1L1-213ENST00000572405 SCAF1Q9H7N4 1312 aaKnown RBP16.38■□□□□ 0.21
TOM1L1-213ENST00000572405 METP08581 1390 aa16.37■□□□□ 0.21
TOM1L1-213ENST00000572405 KNSTRNQ9Y448 316 aa16.37■□□□□ 0.21
TOM1L1-213ENST00000572405 HDGFP51858 240 aaKnown RBP16.36■□□□□ 0.21
TOM1L1-213ENST00000572405 EVC2Q86UK5 1308 aa16.36■□□□□ 0.21
TOM1L1-213ENST00000572405 ADAMTSL3P82987 1691 aa16.36■□□□□ 0.21
TOM1L1-213ENST00000572405 LRPPRCP42704 1394 aaKnown RBP16.36■□□□□ 0.21
TOM1L1-213ENST00000572405 LTKP29376 864 aa16.36■□□□□ 0.21
TOM1L1-213ENST00000572405 BCANQ96GW7 911 aa16.36■□□□□ 0.21
TOM1L1-213ENST00000572405 POGKQ9P215 609 aa16.36■□□□□ 0.21
TOM1L1-213ENST00000572405 MINK1Q8N4C8 1332 aaPredicted RBP16.35■□□□□ 0.21
TOM1L1-213ENST00000572405 HNRNPUQ00839 825 aaKnown RBP eCLIP16.35■□□□□ 0.21
TOM1L1-213ENST00000572405 AMER1Q5JTC6 1135 aaPredicted RBP16.35■□□□□ 0.21
TOM1L1-213ENST00000572405 DLC1Q96QB1 1528 aa16.34■□□□□ 0.21
TOM1L1-213ENST00000572405 TMC1Q8TDI8 760 aa16.34■□□□□ 0.21
TOM1L1-213ENST00000572405 SLIT1O75093 1534 aa16.34■□□□□ 0.21
TOM1L1-213ENST00000572405 BRD4O60885 1362 aaPredicted RBP16.33■□□□□ 0.21
TOM1L1-213ENST00000572405 CABP2Q9NPB3 220 aa16.33■□□□□ 0.2
TOM1L1-213ENST00000572405 ARHGAP23Q9P227 1491 aa16.33■□□□□ 0.2
TOM1L1-213ENST00000572405 ADAMTS13Q76LX8 1427 aa16.33■□□□□ 0.2
TOM1L1-213ENST00000572405 PLEKHG1Q9ULL1 1385 aa16.33■□□□□ 0.2
TOM1L1-213ENST00000572405 PLEKHH1Q9ULM0 1364 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms