RNA–Protein interactions for RNA: ENST00000571562.1

NPLOC4-205, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 301 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-205ENST00000571562 MYSM1Q5VVJ2 828 aa8.46□□□□□ -1.06
NPLOC4-205ENST00000571562 C14orf37Q86TY3 774 aa8.46□□□□□ -1.06
NPLOC4-205ENST00000571562 FAM98CQ17RN3 349 aaKnown RBP8.45□□□□□ -1.06
NPLOC4-205ENST00000571562 SULF1Q8IWU6 871 aa8.45□□□□□ -1.06
NPLOC4-205ENST00000571562 RDH13Q8NBN7 331 aa8.45□□□□□ -1.06
NPLOC4-205ENST00000571562 GOPCQ9HD26 462 aa8.45□□□□□ -1.06
NPLOC4-205ENST00000571562 LSM11P83369 360 aaKnown RBP eCLIP8.44□□□□□ -1.06
NPLOC4-205ENST00000571562 TBC1D2Q9BYX2 928 aa8.44□□□□□ -1.06
NPLOC4-205ENST00000571562 POLR3EQ9NVU0 708 aa8.44□□□□□ -1.06
NPLOC4-205ENST00000571562 PCMTD1Q96MG8 357 aaPredicted RBP8.43□□□□□ -1.06
NPLOC4-205ENST00000571562 NBPF3Q9H094 633 aa8.43□□□□□ -1.06
NPLOC4-205ENST00000571562 CLK2P49760 499 aaKnown RBP8.42□□□□□ -1.06
NPLOC4-205ENST00000571562 ADGRD1Q6QNK2 874 aa8.42□□□□□ -1.06
NPLOC4-205ENST00000571562 SAMD7Q7Z3H4 446 aa8.42□□□□□ -1.06
NPLOC4-205ENST00000571562 PROCA1Q8NCQ7 364 aaPredicted RBP8.42□□□□□ -1.06
NPLOC4-205ENST00000571562 SPIRE2Q8WWL2 714 aa8.42□□□□□ -1.06
NPLOC4-205ENST00000571562 LIMD1Q9UGP4 676 aa8.42□□□□□ -1.06
NPLOC4-205ENST00000571562 BHMG1C9JSJ3 638 aaPredicted RBP8.41□□□□□ -1.06
NPLOC4-205ENST00000571562 TK2O00142 265 aa8.41□□□□□ -1.06
NPLOC4-205ENST00000571562 RNF40O75150 1001 aa8.41□□□□□ -1.06
NPLOC4-205ENST00000571562 SLC10A3P09131 477 aa8.41□□□□□ -1.06
NPLOC4-205ENST00000571562 SKIV2LQ15477 1246 aaKnown RBP8.41□□□□□ -1.06
NPLOC4-205ENST00000571562 RSPH6AQ9H0K4 717 aa8.41□□□□□ -1.06
NPLOC4-205ENST00000571562 ATP1B4Q9UN42 357 aaPredicted RBP8.39□□□□□ -1.07
NPLOC4-205ENST00000571562 MOXD2PA6NHM9 499 aa8.38□□□□□ -1.07
NPLOC4-205ENST00000571562 FBXO31Q5XUX0 539 aaPredicted RBP8.38□□□□□ -1.07
NPLOC4-205ENST00000571562 LAPTM4BQ86VI4 370 aa8.38□□□□□ -1.07
NPLOC4-205ENST00000571562 NUTM1Q86Y26 1132 aa8.38□□□□□ -1.07
NPLOC4-205ENST00000571562 MRPL50Q8N5N7 158 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-205ENST00000571562 ZFRQ96KR1 1074 aaKnown RBP8.38□□□□□ -1.07
NPLOC4-205ENST00000571562 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.38□□□□□ -1.07
NPLOC4-205ENST00000571562 HRO43593 1189 aa8.37□□□□□ -1.07
NPLOC4-205ENST00000571562 CFHP08603 1231 aa8.37□□□□□ -1.07
NPLOC4-205ENST00000571562 ANKRD13DQ6ZTN6 518 aa8.37□□□□□ -1.07
NPLOC4-205ENST00000571562 HLA-CQ95604 372 aa8.37□□□□□ -1.07
NPLOC4-205ENST00000571562 NDUFV2P19404 249 aa8.36□□□□□ -1.07
NPLOC4-205ENST00000571562 CSPP1Q1MSJ5 1256 aa8.36□□□□□ -1.07
NPLOC4-205ENST00000571562 RSBN1LQ6PCB5 846 aaPredicted RBP8.36□□□□□ -1.07
NPLOC4-205ENST00000571562 HOXA2O43364 376 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 KDM4AO75164 1064 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 GCGRP47871 477 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 GUCA2AQ02747 115 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 DIXDC1Q155Q3 683 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 RIC3Q7Z5B4 369 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 SLF2Q8IX21 1173 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 KRTAP3-3Q9BYR6 98 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 KRTAP3-2Q9BYR7 98 aa8.35□□□□□ -1.07
NPLOC4-205ENST00000571562 QPCTQ16769 361 aa8.34□□□□□ -1.07
NPLOC4-205ENST00000571562 SPTLC1O15269 473 aa8.33□□□□□ -1.08
NPLOC4-205ENST00000571562 ERICH6Q7L0X2 663 aa8.33□□□□□ -1.08
NPLOC4-205ENST00000571562 LRCH3Q96II8 777 aa8.33□□□□□ -1.08
NPLOC4-205ENST00000571562 SLC4A3P48751 1232 aa8.32□□□□□ -1.08
NPLOC4-205ENST00000571562 BCAMP50895 628 aa8.32□□□□□ -1.08
NPLOC4-205ENST00000571562 HDGFP51858 240 aaKnown RBP8.32□□□□□ -1.08
NPLOC4-205ENST00000571562 FUT2Q10981 343 aa8.32□□□□□ -1.08
NPLOC4-205ENST00000571562 MCM6Q14566 821 aa8.32□□□□□ -1.08
NPLOC4-205ENST00000571562 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.32□□□□□ -1.08
NPLOC4-205ENST00000571562 PCDHB15Q9Y5E8 787 aa8.32□□□□□ -1.08
NPLOC4-205ENST00000571562 RFC5P40937 340 aa8.31□□□□□ -1.08
NPLOC4-205ENST00000571562 RSPH4AQ5TD94 716 aa8.31□□□□□ -1.08
NPLOC4-205ENST00000571562 CABLES1Q8TDN4 633 aa8.31□□□□□ -1.08
NPLOC4-205ENST00000571562 USP46P62068 366 aa8.3□□□□□ -1.08
NPLOC4-205ENST00000571562 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
NPLOC4-205ENST00000571562 PCDHGC3Q9UN70 934 aa8.3□□□□□ -1.08
NPLOC4-205ENST00000571562 FDX1P10109 184 aa8.29□□□□□ -1.08
NPLOC4-205ENST00000571562 GOLGA8CPA6NN73 597 aa8.28□□□□□ -1.08
NPLOC4-205ENST00000571562 WNT2BQ93097 391 aa8.28□□□□□ -1.08
NPLOC4-205ENST00000571562 HPS5Q9UPZ3 1129 aa8.28□□□□□ -1.08
NPLOC4-205ENST00000571562 SOWAHBA6NEL2 793 aa8.27□□□□□ -1.09
NPLOC4-205ENST00000571562 LILRB3O75022 631 aa8.27□□□□□ -1.09
NPLOC4-205ENST00000571562 GJA5P36382 358 aa8.27□□□□□ -1.09
NPLOC4-205ENST00000571562 FLIIQ13045 1269 aa8.27□□□□□ -1.09
NPLOC4-205ENST00000571562 TUSC1Q2TAM9 212 aa8.27□□□□□ -1.09
NPLOC4-205ENST00000571562 RTL5Q5HYW3 569 aaPredicted RBP8.27□□□□□ -1.09
NPLOC4-205ENST00000571562 PPP2R2DQ66LE6 453 aa8.27□□□□□ -1.09
NPLOC4-205ENST00000571562 STAC3Q96MF2 364 aa8.27□□□□□ -1.09
NPLOC4-205ENST00000571562 HRCP23327 699 aa8.26□□□□□ -1.09
NPLOC4-205ENST00000571562 PUS10Q3MIT2 529 aaKnown RBP8.26□□□□□ -1.09
NPLOC4-205ENST00000571562 KMT5BQ4FZB7 885 aa8.26□□□□□ -1.09
NPLOC4-205ENST00000571562 POTEGQ6S5H5 508 aa8.26□□□□□ -1.09
NPLOC4-205ENST00000571562 POTEMA6NI47 508 aa8.25□□□□□ -1.09
NPLOC4-205ENST00000571562 APLP1P51693 650 aa8.25□□□□□ -1.09
NPLOC4-205ENST00000571562 ZBTB3Q9H5J0 574 aa8.25□□□□□ -1.09
NPLOC4-205ENST00000571562 NUTM2BA6NNL0 878 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-205ENST00000571562 NUTM2EB1AL46 878 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-205ENST00000571562 SUPT5HO00267 1087 aaKnown RBP8.24□□□□□ -1.09
NPLOC4-205ENST00000571562 NUTM2DQ5VT03 806 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-205ENST00000571562 NUTM2AQ8IVF1 878 aaPredicted RBP8.24□□□□□ -1.09
NPLOC4-205ENST00000571562 CLUAP1Q96AJ1 413 aa8.24□□□□□ -1.09
NPLOC4-205ENST00000571562 SNRKQ9NRH2 765 aa8.24□□□□□ -1.09
NPLOC4-205ENST00000571562 ACTN4O43707 911 aaKnown RBP8.23□□□□□ -1.09
NPLOC4-205ENST00000571562 UBTFP17480 764 aaKnown RBP8.23□□□□□ -1.09
NPLOC4-205ENST00000571562 ATP6V1AP38606 617 aa8.23□□□□□ -1.09
NPLOC4-205ENST00000571562 MORN1Q5T089 497 aa8.23□□□□□ -1.09
NPLOC4-205ENST00000571562 PRPF38BQ5VTL8 546 aaKnown RBP8.23□□□□□ -1.09
NPLOC4-205ENST00000571562 SYMPKQ92797 1274 aaKnown RBP8.23□□□□□ -1.09
NPLOC4-205ENST00000571562 SPDYE5A6NIY4 337 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 C6orf229H3BNL8 230 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 AP1G2O75843 785 aa8.22□□□□□ -1.09
NPLOC4-205ENST00000571562 USP17L8P0C7I0 530 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms