RNA–Protein interactions for RNA: ENST00000571558.5

RPAIN-209, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-209ENST00000571558 HDGFP51858 240 aaKnown RBP20.81■□□□□ 0.92
RPAIN-209ENST00000571558 CROCC2H7BZ55 1655 aa20.81■□□□□ 0.92
RPAIN-209ENST00000571558 NCOA3Q9Y6Q9 1424 aa20.81■□□□□ 0.92
RPAIN-209ENST00000571558 ANKRD30AQ9BXX3 1397 aa20.8■□□□□ 0.92
RPAIN-209ENST00000571558 ADGRB3O60242 1522 aa20.8■□□□□ 0.92
RPAIN-209ENST00000571558 DAPK1P53355 1430 aa20.79■□□□□ 0.92
RPAIN-209ENST00000571558 RBM33Q96EV2 1170 aaKnown RBP20.78■□□□□ 0.92
RPAIN-209ENST00000571558 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
RPAIN-209ENST00000571558 FAM50AQ14320 339 aaKnown RBP20.78■□□□□ 0.92
RPAIN-209ENST00000571558 BCANQ96GW7 911 aa20.78■□□□□ 0.92
RPAIN-209ENST00000571558 PHLPP1O60346 1717 aa20.77■□□□□ 0.91
RPAIN-209ENST00000571558 RPRD2Q5VT52 1461 aaKnown RBP20.76■□□□□ 0.91
RPAIN-209ENST00000571558 PLEKHG1Q9ULL1 1385 aa20.76■□□□□ 0.91
RPAIN-209ENST00000571558 ZNF772Q68DY9 489 aaPredicted RBP20.76■□□□□ 0.91
RPAIN-209ENST00000571558 TBX22Q9Y458 520 aa20.74■□□□□ 0.91
RPAIN-209ENST00000571558 ZFYVE9O95405 1425 aa20.73■□□□□ 0.91
RPAIN-209ENST00000571558 CADPS2Q86UW7 1296 aa20.71■□□□□ 0.91
RPAIN-209ENST00000571558 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
RPAIN-209ENST00000571558 PPP1R15AO75807 674 aaPredicted RBP20.7■□□□□ 0.9
RPAIN-209ENST00000571558 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.7■□□□□ 0.9
RPAIN-209ENST00000571558 CHD2O14647 1828 aaKnown RBP20.7■□□□□ 0.9
RPAIN-209ENST00000571558 UPF1Q92900 1129 aaKnown RBP eCLIP20.7■□□□□ 0.9
RPAIN-209ENST00000571558 PCGF6Q9BYE7 350 aa20.69■□□□□ 0.9
RPAIN-209ENST00000571558 C19orf44Q9H6X5 657 aa20.69■□□□□ 0.9
RPAIN-209ENST00000571558 CHIC2Q9UKJ5 165 aa20.69■□□□□ 0.9
RPAIN-209ENST00000571558 PIK3R4Q99570 1358 aa20.68■□□□□ 0.9
RPAIN-209ENST00000571558 RIMS2Q9UQ26 1411 aa20.68■□□□□ 0.9
RPAIN-209ENST00000571558 MEX3CQ5U5Q3 659 aaKnown RBP20.68■□□□□ 0.9
RPAIN-209ENST00000571558 SETD1AO15047 1707 aaKnown RBP20.67■□□□□ 0.9
RPAIN-209ENST00000571558 ADGRL2O95490 1459 aa20.67■□□□□ 0.9
RPAIN-209ENST00000571558 ATF3P18847 181 aa20.66■□□□□ 0.9
RPAIN-209ENST00000571558 C14orf37Q86TY3 774 aa20.66■□□□□ 0.9
RPAIN-209ENST00000571558 AHDC1Q5TGY3 1603 aaPredicted RBP20.65■□□□□ 0.9
RPAIN-209ENST00000571558 LRP6O75581 1613 aa20.65■□□□□ 0.9
RPAIN-209ENST00000571558 ITGAEP38570 1179 aa20.64■□□□□ 0.89
RPAIN-209ENST00000571558 RXRBP28702 533 aa20.63■□□□□ 0.89
RPAIN-209ENST00000571558 CDK12Q9NYV4 1490 aaPredicted RBP20.63■□□□□ 0.89
RPAIN-209ENST00000571558 TMEM131LA2VDJ0 1609 aa20.63■□□□□ 0.89
RPAIN-209ENST00000571558 ANKRD50Q9ULJ7 1429 aa20.62■□□□□ 0.89
RPAIN-209ENST00000571558 DIP2AQ14689 1571 aa20.62■□□□□ 0.89
RPAIN-209ENST00000571558 SHPRHQ149N8 1683 aa20.62■□□□□ 0.89
RPAIN-209ENST00000571558 TRIM52Q96A61 297 aa20.61■□□□□ 0.89
RPAIN-209ENST00000571558 ADAMTS13Q76LX8 1427 aa20.6■□□□□ 0.89
RPAIN-209ENST00000571558 DCCP43146 1447 aa20.58■□□□□ 0.89
RPAIN-209ENST00000571558 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.58■□□□□ 0.89
RPAIN-209ENST00000571558 ROCK1Q13464 1354 aa20.58■□□□□ 0.88
RPAIN-209ENST00000571558 GCC2Q8IWJ2 1684 aa20.58■□□□□ 0.88
RPAIN-209ENST00000571558 BRINP3Q76B58 766 aa20.56■□□□□ 0.88
RPAIN-209ENST00000571558 MYO5BQ9ULV0 1848 aa20.55■□□□□ 0.88
RPAIN-209ENST00000571558 CHGAP10645 457 aaKnown RBP20.54■□□□□ 0.88
RPAIN-209ENST00000571558 HFM1A2PYH4 1435 aa20.53■□□□□ 0.88
RPAIN-209ENST00000571558 TRPM2O94759 1503 aa20.53■□□□□ 0.88
RPAIN-209ENST00000571558 SETD5Q9C0A6 1442 aa20.53■□□□□ 0.88
RPAIN-209ENST00000571558 AMOTL2Q9Y2J4 779 aa20.53■□□□□ 0.88
RPAIN-209ENST00000571558 LRRC59Q96AG4 307 aaKnown RBP20.53■□□□□ 0.88
RPAIN-209ENST00000571558 NAIPQ13075 1403 aa20.5■□□□□ 0.87
RPAIN-209ENST00000571558 AFF2P51816 1311 aa20.5■□□□□ 0.87
RPAIN-209ENST00000571558 NUTM2BA6NNL0 878 aaPredicted RBP20.5■□□□□ 0.87
RPAIN-209ENST00000571558 NUTM2EB1AL46 878 aaPredicted RBP20.5■□□□□ 0.87
RPAIN-209ENST00000571558 NUTM2AQ8IVF1 878 aaPredicted RBP20.5■□□□□ 0.87
RPAIN-209ENST00000571558 UNC13BO14795 1591 aa20.48■□□□□ 0.87
RPAIN-209ENST00000571558 NUTM2DQ5VT03 806 aaPredicted RBP20.48■□□□□ 0.87
RPAIN-209ENST00000571558 ASXL1Q8IXJ9 1541 aa20.47■□□□□ 0.87
RPAIN-209ENST00000571558 RBM6P78332 1123 aaKnown RBP20.47■□□□□ 0.87
RPAIN-209ENST00000571558 PTPRUQ92729 1446 aa20.46■□□□□ 0.87
RPAIN-209ENST00000571558 MST1RQ04912 1400 aa20.45■□□□□ 0.86
RPAIN-209ENST00000571558 QTRT2Q9H974 415 aaKnown RBP20.44■□□□□ 0.86
RPAIN-209ENST00000571558 E9PCH4 1651 aa20.44■□□□□ 0.86
RPAIN-209ENST00000571558 NHSL1Q5SYE7 1610 aa20.43■□□□□ 0.86
RPAIN-209ENST00000571558 NGLY1Q96IV0 654 aa20.43■□□□□ 0.86
RPAIN-209ENST00000571558 FOXD1Q16676 465 aa20.42■□□□□ 0.86
RPAIN-209ENST00000571558 XRN1Q8IZH2 1706 aaKnown RBP20.42■□□□□ 0.86
RPAIN-209ENST00000571558 SRCAPQ6ZRS2 3230 aa20.41■□□□□ 0.86
RPAIN-209ENST00000571558 SETBP1Q9Y6X0 1596 aa20.41■□□□□ 0.86
RPAIN-209ENST00000571558 RAB3GAP2Q9H2M9 1393 aa20.41■□□□□ 0.86
RPAIN-209ENST00000571558 C8orf37Q96NL8 207 aa20.41■□□□□ 0.86
RPAIN-209ENST00000571558 IQGAP3Q86VI3 1631 aa20.41■□□□□ 0.86
RPAIN-209ENST00000571558 PNPLA6Q8IY17 1366 aa20.4■□□□□ 0.86
RPAIN-209ENST00000571558 RGS12O14924 1447 aa20.4■□□□□ 0.86
RPAIN-209ENST00000571558 HRCP23327 699 aa20.39■□□□□ 0.85
RPAIN-209ENST00000571558 ADGRL3Q9HAR2 1447 aa20.38■□□□□ 0.85
RPAIN-209ENST00000571558 NUP155O75694 1391 aa20.38■□□□□ 0.85
RPAIN-209ENST00000571558 ATAD2Q6PL18 1390 aa20.36■□□□□ 0.85
RPAIN-209ENST00000571558 NRXN3Q9Y4C0 1643 aa20.36■□□□□ 0.85
RPAIN-209ENST00000571558 METP08581 1390 aa20.35■□□□□ 0.85
RPAIN-209ENST00000571558 ZNF326Q5BKZ1 582 aaKnown RBP20.32■□□□□ 0.84
RPAIN-209ENST00000571558 TRPC5Q9UL62 973 aaPredicted RBP20.31■□□□□ 0.84
RPAIN-209ENST00000571558 SOS2Q07890 1332 aaPredicted RBP20.31■□□□□ 0.84
RPAIN-209ENST00000571558 LAMC1P11047 1609 aa20.3■□□□□ 0.84
RPAIN-209ENST00000571558 C1orf167Q5SNV9 1468 aa20.3■□□□□ 0.84
RPAIN-209ENST00000571558 ADAMTS2O95450 1211 aa20.3■□□□□ 0.84
RPAIN-209ENST00000571558 CCDC125Q86Z20 511 aa20.3■□□□□ 0.84
RPAIN-209ENST00000571558 FNBP4Q8N3X1 1017 aaPredicted RBP20.3■□□□□ 0.84
RPAIN-209ENST00000571558 PTCH1Q13635 1447 aa20.29■□□□□ 0.84
RPAIN-209ENST00000571558 DDX17Q92841 729 aaKnown RBP20.29■□□□□ 0.84
RPAIN-209ENST00000571558 USP21Q9UK80 565 aa20.29■□□□□ 0.84
RPAIN-209ENST00000571558 ZRANB1Q9UGI0 708 aa20.28■□□□□ 0.84
RPAIN-209ENST00000571558 ACIN1Q9UKV3 1341 aaKnown RBP20.26■□□□□ 0.83
RPAIN-209ENST00000571558 NALCNQ8IZF0 1738 aa20.26■□□□□ 0.83
RPAIN-209ENST00000571558 SPHKAPQ2M3C7 1700 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms