RNA–Protein interactions for RNA: ENST00000571272.5

SCARF1-205, Transcript of scavenger receptor class F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCARF1, Length 2,871 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-205ENST00000571272 SLFN5Q08AF3 891 aa22.79■■□□□ 1.24
SCARF1-205ENST00000571272 SPINK5Q9NQ38 1064 aaPredicted RBP22.79■■□□□ 1.24
SCARF1-205ENST00000571272 DAXXQ9UER7 740 aaPredicted RBP22.78■■□□□ 1.24
SCARF1-205ENST00000571272 RNF17Q9BXT8 1623 aaKnown RBP22.78■■□□□ 1.24
SCARF1-205ENST00000571272 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
SCARF1-205ENST00000571272 CDCA8Q53HL2 280 aa22.77■■□□□ 1.24
SCARF1-205ENST00000571272 APAF1O14727 1248 aa22.77■■□□□ 1.24
SCARF1-205ENST00000571272 C8orf34Q49A92 452 aa22.76■■□□□ 1.23
SCARF1-205ENST00000571272 NFKBIBQ15653 356 aa22.75■■□□□ 1.23
SCARF1-205ENST00000571272 BCAR3O75815 825 aa22.74■■□□□ 1.23
SCARF1-205ENST00000571272 EFCAB2Q5VUJ9 269 aa22.74■■□□□ 1.23
SCARF1-205ENST00000571272 MADDQ8WXG6 1647 aa22.73■■□□□ 1.23
SCARF1-205ENST00000571272 ASXL1Q8IXJ9 1541 aa22.72■■□□□ 1.23
SCARF1-205ENST00000571272 SCAF11Q99590 1463 aaKnown RBP22.72■■□□□ 1.23
SCARF1-205ENST00000571272 TRAPPC8Q9Y2L5 1435 aa22.72■■□□□ 1.23
SCARF1-205ENST00000571272 AFAP1Q8N556 730 aa22.71■■□□□ 1.23
SCARF1-205ENST00000571272 IQGAP1P46940 1657 aa22.7■■□□□ 1.22
SCARF1-205ENST00000571272 PIK3C2GO75747 1445 aa22.69■■□□□ 1.22
SCARF1-205ENST00000571272 TRMT2AQ8IZ69 625 aaKnown RBP22.69■■□□□ 1.22
SCARF1-205ENST00000571272 DMRT2Q9Y5R5 561 aa22.69■■□□□ 1.22
SCARF1-205ENST00000571272 PLCH2O75038 1416 aa22.68■■□□□ 1.22
SCARF1-205ENST00000571272 SYNMO15061 1565 aa22.68■■□□□ 1.22
SCARF1-205ENST00000571272 SPAG9O60271 1321 aaKnown RBP22.68■■□□□ 1.22
SCARF1-205ENST00000571272 ERCC6L2Q5T890 1561 aa22.67■■□□□ 1.22
SCARF1-205ENST00000571272 GSE1Q14687 1217 aa22.67■■□□□ 1.22
SCARF1-205ENST00000571272 ABCC2Q92887 1545 aa22.65■■□□□ 1.22
SCARF1-205ENST00000571272 CFAP70Q5T0N1 1121 aa22.65■■□□□ 1.22
SCARF1-205ENST00000571272 NKTRP30414 1462 aaKnown RBP22.65■■□□□ 1.22
SCARF1-205ENST00000571272 E9PSI1 815 aa22.64■■□□□ 1.21
SCARF1-205ENST00000571272 IGHDP01880 384 aa22.64■■□□□ 1.21
SCARF1-205ENST00000571272 SCAPERQ9BY12 1400 aa22.63■■□□□ 1.21
SCARF1-205ENST00000571272 CARD14Q9BXL6 1004 aa22.63■■□□□ 1.21
SCARF1-205ENST00000571272 EIF3AQ14152 1382 aaKnown RBP22.63■■□□□ 1.21
SCARF1-205ENST00000571272 CLASP1Q7Z460 1538 aa22.62■■□□□ 1.21
SCARF1-205ENST00000571272 TRPM2O94759 1503 aa22.62■■□□□ 1.21
SCARF1-205ENST00000571272 NPC1L1Q9UHC9 1359 aa22.62■■□□□ 1.21
SCARF1-205ENST00000571272 CHD1O14646 1710 aa22.61■■□□□ 1.21
SCARF1-205ENST00000571272 ANO8Q9HCE9 1232 aaPredicted RBP22.61■■□□□ 1.21
SCARF1-205ENST00000571272 BRPF3Q9ULD4 1205 aa22.61■■□□□ 1.21
SCARF1-205ENST00000571272 SPHKAPQ2M3C7 1700 aa22.61■■□□□ 1.21
SCARF1-205ENST00000571272 MYOM1P52179 1685 aa22.61■■□□□ 1.21
SCARF1-205ENST00000571272 FRAT1Q92837 279 aaPredicted RBP22.6■■□□□ 1.21
SCARF1-205ENST00000571272 CLTCL1P53675 1640 aa22.6■■□□□ 1.21
SCARF1-205ENST00000571272 ABCC1P33527 1531 aa22.6■■□□□ 1.21
SCARF1-205ENST00000571272 STAC3Q96MF2 364 aa22.6■■□□□ 1.21
SCARF1-205ENST00000571272 CANXP27824 592 aaKnown RBP22.59■■□□□ 1.21
SCARF1-205ENST00000571272 NEUROD2Q15784 382 aa22.59■■□□□ 1.21
SCARF1-205ENST00000571272 PANK1Q8TE04 598 aa22.59■■□□□ 1.21
SCARF1-205ENST00000571272 PTPRTO14522 1441 aa22.59■■□□□ 1.21
SCARF1-205ENST00000571272 FRAT2O75474 233 aaPredicted RBP22.58■■□□□ 1.21
SCARF1-205ENST00000571272 COG6Q9Y2V7 657 aa22.58■■□□□ 1.21
SCARF1-205ENST00000571272 ADGRF5Q8IZF2 1346 aa22.57■■□□□ 1.2
SCARF1-205ENST00000571272 KIF3BO15066 747 aa22.57■■□□□ 1.2
SCARF1-205ENST00000571272 TNNT2P45379 298 aaPredicted RBP22.56■■□□□ 1.2
SCARF1-205ENST00000571272 CEP152O94986 1710 aa22.56■■□□□ 1.2
SCARF1-205ENST00000571272 CENPJQ9HC77 1338 aaPredicted RBP22.55■■□□□ 1.2
SCARF1-205ENST00000571272 KDM5AP29375 1690 aaKnown RBP22.55■■□□□ 1.2
SCARF1-205ENST00000571272 WWC1Q8IX03 1113 aa22.55■■□□□ 1.2
SCARF1-205ENST00000571272 RRP7AQ9Y3A4 280 aaKnown RBP22.54■■□□□ 1.2
SCARF1-205ENST00000571272 SHROOM2Q13796 1616 aa22.54■■□□□ 1.2
SCARF1-205ENST00000571272 ERVK-7P63135 1459 aa22.54■■□□□ 1.2
SCARF1-205ENST00000571272 CLUAP1Q96AJ1 413 aa22.53■■□□□ 1.2
SCARF1-205ENST00000571272 CGNL1Q0VF96 1302 aa22.53■■□□□ 1.2
SCARF1-205ENST00000571272 SEC24BO95487 1268 aa22.52■■□□□ 1.2
SCARF1-205ENST00000571272 KANK1Q14678 1352 aa22.52■■□□□ 1.2
SCARF1-205ENST00000571272 PDE3AQ14432 1141 aa22.52■■□□□ 1.19
SCARF1-205ENST00000571272 UGGT1Q9NYU2 1555 aa22.51■■□□□ 1.19
SCARF1-205ENST00000571272 ZCCHC11Q5TAX3 1644 aaKnown RBP22.51■■□□□ 1.19
SCARF1-205ENST00000571272 USP19O94966 1318 aa22.5■■□□□ 1.19
SCARF1-205ENST00000571272 ZFYVE16Q7Z3T8 1539 aa22.5■■□□□ 1.19
SCARF1-205ENST00000571272 RTEL1-TNFRSF6BF6WH68 1400 aa22.49■■□□□ 1.19
SCARF1-205ENST00000571272 MORC1Q86VD1 984 aa22.47■■□□□ 1.19
SCARF1-205ENST00000571272 NGEFQ8N5V2 710 aa22.47■■□□□ 1.19
SCARF1-205ENST00000571272 BCL2L13Q9BXK5 485 aa22.47■■□□□ 1.19
SCARF1-205ENST00000571272 SLC24A1O60721 1099 aa22.46■■□□□ 1.19
SCARF1-205ENST00000571272 CHGAP10645 457 aaKnown RBP22.46■■□□□ 1.19
SCARF1-205ENST00000571272 TNNQ9UQP3 1299 aa22.46■■□□□ 1.19
SCARF1-205ENST00000571272 TET3O43151 1660 aa22.46■■□□□ 1.19
SCARF1-205ENST00000571272 SLC12A5Q9H2X9 1139 aa22.45■■□□□ 1.18
SCARF1-205ENST00000571272 POLR3AO14802 1390 aaPredicted RBP22.44■■□□□ 1.18
SCARF1-205ENST00000571272 TRAK1Q9UPV9 953 aa22.44■■□□□ 1.18
SCARF1-205ENST00000571272 MAPK8IP3Q9UPT6 1336 aa22.44■■□□□ 1.18
SCARF1-205ENST00000571272 TCP11L2Q8N4U5 519 aa22.44■■□□□ 1.18
SCARF1-205ENST00000571272 ABCA6Q8N139 1617 aa22.43■■□□□ 1.18
SCARF1-205ENST00000571272 RARSP54136 660 aaKnown RBP22.43■■□□□ 1.18
SCARF1-205ENST00000571272 NSD3Q9BZ95 1437 aa22.42■■□□□ 1.18
SCARF1-205ENST00000571272 MAP3K4Q9Y6R4 1608 aa22.42■■□□□ 1.18
SCARF1-205ENST00000571272 RLBP1P12271 317 aa22.42■■□□□ 1.18
SCARF1-205ENST00000571272 DEPDC5O75140 1603 aa22.42■■□□□ 1.18
SCARF1-205ENST00000571272 SLKQ9H2G2 1235 aaPredicted RBP22.42■■□□□ 1.18
SCARF1-205ENST00000571272 KIAA1210Q9ULL0 1709 aa22.42■■□□□ 1.18
SCARF1-205ENST00000571272 RUNDC1Q96C34 613 aa22.41■■□□□ 1.18
SCARF1-205ENST00000571272 PCDHB15Q9Y5E8 787 aa22.41■■□□□ 1.18
SCARF1-205ENST00000571272 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.41■■□□□ 1.18
SCARF1-205ENST00000571272 ATP7AQ04656 1500 aa22.39■■□□□ 1.18
SCARF1-205ENST00000571272 NINLQ9Y2I6 1382 aa22.39■■□□□ 1.18
SCARF1-205ENST00000571272 MYOM2P54296 1465 aa22.38■■□□□ 1.17
SCARF1-205ENST00000571272 MTHFSP49914 203 aa22.38■■□□□ 1.17
SCARF1-205ENST00000571272 TMEM132EQ6IEE7 984 aa22.37■■□□□ 1.17
SCARF1-205ENST00000571272 BECN1Q14457 450 aa22.37■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms