RNA–Protein interactions for RNA: ENST00000571028.1

CCDC40-205, Transcript of coiled-coil domain containing 40, humanhuman

TSL 5

Gene CCDC40, Length 593 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-205ENST00000571028 NWD1Q149M9 1564 aa20.31■□□□□ 0.84
CCDC40-205ENST00000571028 C14orf37Q86TY3 774 aa20.31■□□□□ 0.84
CCDC40-205ENST00000571028 SPATA31A6Q5VVP1 1343 aa20.3■□□□□ 0.84
CCDC40-205ENST00000571028 PPP1R15AO75807 674 aaPredicted RBP20.3■□□□□ 0.84
CCDC40-205ENST00000571028 ADGRB3O60242 1522 aa20.29■□□□□ 0.84
CCDC40-205ENST00000571028 UPF1Q92900 1129 aaKnown RBP eCLIP20.29■□□□□ 0.84
CCDC40-205ENST00000571028 ABCC5O15440 1437 aa20.27■□□□□ 0.84
CCDC40-205ENST00000571028 SLC52A1Q9NWF4 448 aa20.27■□□□□ 0.84
CCDC40-205ENST00000571028 PTPN23Q9H3S7 1636 aa20.27■□□□□ 0.83
CCDC40-205ENST00000571028 LMTK2Q8IWU2 1503 aa20.27■□□□□ 0.83
CCDC40-205ENST00000571028 HDGFP51858 240 aaKnown RBP20.26■□□□□ 0.83
CCDC40-205ENST00000571028 COL16A1Q07092 1604 aaPredicted RBP20.24■□□□□ 0.83
CCDC40-205ENST00000571028 CROCC2H7BZ55 1655 aa20.24■□□□□ 0.83
CCDC40-205ENST00000571028 ITGAEP38570 1179 aa20.24■□□□□ 0.83
CCDC40-205ENST00000571028 LRP6O75581 1613 aa20.24■□□□□ 0.83
CCDC40-205ENST00000571028 ANKRD30AQ9BXX3 1397 aa20.23■□□□□ 0.83
CCDC40-205ENST00000571028 RXRBP28702 533 aa20.23■□□□□ 0.83
CCDC40-205ENST00000571028 NOS1P29475 1434 aa20.23■□□□□ 0.83
CCDC40-205ENST00000571028 DAPK1P53355 1430 aa20.23■□□□□ 0.83
CCDC40-205ENST00000571028 PLEKHG1Q9ULL1 1385 aa20.22■□□□□ 0.83
CCDC40-205ENST00000571028 ATF3P18847 181 aa20.22■□□□□ 0.83
CCDC40-205ENST00000571028 CADPS2Q86UW7 1296 aa20.22■□□□□ 0.83
CCDC40-205ENST00000571028 CHIC2Q9UKJ5 165 aa20.21■□□□□ 0.83
CCDC40-205ENST00000571028 NCOA3Q9Y6Q9 1424 aa20.2■□□□□ 0.82
CCDC40-205ENST00000571028 RIMS2Q9UQ26 1411 aa20.19■□□□□ 0.82
CCDC40-205ENST00000571028 NUTM2BA6NNL0 878 aaPredicted RBP20.18■□□□□ 0.82
CCDC40-205ENST00000571028 NUTM2EB1AL46 878 aaPredicted RBP20.18■□□□□ 0.82
CCDC40-205ENST00000571028 NUTM2AQ8IVF1 878 aaPredicted RBP20.18■□□□□ 0.82
CCDC40-205ENST00000571028 C19orf44Q9H6X5 657 aa20.17■□□□□ 0.82
CCDC40-205ENST00000571028 ZFYVE9O95405 1425 aa20.17■□□□□ 0.82
CCDC40-205ENST00000571028 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
CCDC40-205ENST00000571028 TBX22Q9Y458 520 aa20.16■□□□□ 0.82
CCDC40-205ENST00000571028 AHDC1Q5TGY3 1603 aaPredicted RBP20.16■□□□□ 0.82
CCDC40-205ENST00000571028 CHGAP10645 457 aaKnown RBP20.15■□□□□ 0.82
CCDC40-205ENST00000571028 RPRD2Q5VT52 1461 aaKnown RBP20.15■□□□□ 0.82
CCDC40-205ENST00000571028 CHD2O14647 1828 aaKnown RBP20.13■□□□□ 0.81
CCDC40-205ENST00000571028 SHPRHQ149N8 1683 aa20.13■□□□□ 0.81
CCDC40-205ENST00000571028 CDK12Q9NYV4 1490 aaPredicted RBP20.13■□□□□ 0.81
CCDC40-205ENST00000571028 RRBP1Q9P2E9 1410 aaKnown RBP20.11■□□□□ 0.81
CCDC40-205ENST00000571028 AFF2P51816 1311 aa20.11■□□□□ 0.81
CCDC40-205ENST00000571028 PIK3R4Q99570 1358 aa20.09■□□□□ 0.81
CCDC40-205ENST00000571028 NUTM2DQ5VT03 806 aaPredicted RBP20.09■□□□□ 0.81
CCDC40-205ENST00000571028 BRINP3Q76B58 766 aa20.09■□□□□ 0.81
CCDC40-205ENST00000571028 DIP2AQ14689 1571 aa20.08■□□□□ 0.81
CCDC40-205ENST00000571028 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.08■□□□□ 0.81
CCDC40-205ENST00000571028 GCC2Q8IWJ2 1684 aa20.08■□□□□ 0.81
CCDC40-205ENST00000571028 TMEM131LA2VDJ0 1609 aa20.06■□□□□ 0.8
CCDC40-205ENST00000571028 ADAMTS13Q76LX8 1427 aa20.05■□□□□ 0.8
CCDC40-205ENST00000571028 ANKRD50Q9ULJ7 1429 aa20.05■□□□□ 0.8
CCDC40-205ENST00000571028 C8orf37Q96NL8 207 aa20.05■□□□□ 0.8
CCDC40-205ENST00000571028 AMOTL2Q9Y2J4 779 aa20.05■□□□□ 0.8
CCDC40-205ENST00000571028 TRPM2O94759 1503 aa20.04■□□□□ 0.8
CCDC40-205ENST00000571028 RBM6P78332 1123 aaKnown RBP20.04■□□□□ 0.8
CCDC40-205ENST00000571028 DCCP43146 1447 aa20.03■□□□□ 0.8
CCDC40-205ENST00000571028 LRRC59Q96AG4 307 aaKnown RBP20.03■□□□□ 0.8
CCDC40-205ENST00000571028 QTRT2Q9H974 415 aaKnown RBP20.03■□□□□ 0.8
CCDC40-205ENST00000571028 ADGRL2O95490 1459 aa20.03■□□□□ 0.8
CCDC40-205ENST00000571028 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
CCDC40-205ENST00000571028 MYO5BQ9ULV0 1848 aa20.02■□□□□ 0.8
CCDC40-205ENST00000571028 FOXD1Q16676 465 aa20.02■□□□□ 0.8
CCDC40-205ENST00000571028 RGS12O14924 1447 aa20.02■□□□□ 0.79
CCDC40-205ENST00000571028 SETD5Q9C0A6 1442 aa20.02■□□□□ 0.79
CCDC40-205ENST00000571028 NGLY1Q96IV0 654 aa19.99■□□□□ 0.79
CCDC40-205ENST00000571028 ATAD2Q6PL18 1390 aa19.96■□□□□ 0.79
CCDC40-205ENST00000571028 MST1RQ04912 1400 aa19.95■□□□□ 0.78
CCDC40-205ENST00000571028 PTPRUQ92729 1446 aa19.95■□□□□ 0.78
CCDC40-205ENST00000571028 ADAMTS2O95450 1211 aa19.95■□□□□ 0.78
CCDC40-205ENST00000571028 SRCAPQ6ZRS2 3230 aa19.94■□□□□ 0.78
CCDC40-205ENST00000571028 PNPLA6Q8IY17 1366 aa19.94■□□□□ 0.78
CCDC40-205ENST00000571028 ZRANB1Q9UGI0 708 aa19.93■□□□□ 0.78
CCDC40-205ENST00000571028 NHSL1Q5SYE7 1610 aa19.92■□□□□ 0.78
CCDC40-205ENST00000571028 DDX17Q92841 729 aaKnown RBP19.92■□□□□ 0.78
CCDC40-205ENST00000571028 ROCK1Q13464 1354 aa19.92■□□□□ 0.78
CCDC40-205ENST00000571028 UNC13BO14795 1591 aa19.91■□□□□ 0.78
CCDC40-205ENST00000571028 ZNF326Q5BKZ1 582 aaKnown RBP19.9■□□□□ 0.78
CCDC40-205ENST00000571028 E9PCH4 1651 aa19.89■□□□□ 0.77
CCDC40-205ENST00000571028 USP21Q9UK80 565 aa19.89■□□□□ 0.77
CCDC40-205ENST00000571028 ADGRL3Q9HAR2 1447 aa19.88■□□□□ 0.77
CCDC40-205ENST00000571028 TRPC5Q9UL62 973 aaPredicted RBP19.88■□□□□ 0.77
CCDC40-205ENST00000571028 XRN1Q8IZH2 1706 aaKnown RBP19.88■□□□□ 0.77
CCDC40-205ENST00000571028 SETBP1Q9Y6X0 1596 aa19.86■□□□□ 0.77
CCDC40-205ENST00000571028 NUP155O75694 1391 aa19.85■□□□□ 0.77
CCDC40-205ENST00000571028 METP08581 1390 aa19.84■□□□□ 0.77
CCDC40-205ENST00000571028 IQGAP3Q86VI3 1631 aa19.83■□□□□ 0.76
CCDC40-205ENST00000571028 NAIPQ13075 1403 aa19.82■□□□□ 0.76
CCDC40-205ENST00000571028 C1orf167Q5SNV9 1468 aa19.81■□□□□ 0.76
CCDC40-205ENST00000571028 NRXN3Q9Y4C0 1643 aa19.81■□□□□ 0.76
CCDC40-205ENST00000571028 PTCH1Q13635 1447 aa19.8■□□□□ 0.76
CCDC40-205ENST00000571028 CCDC125Q86Z20 511 aa19.8■□□□□ 0.76
CCDC40-205ENST00000571028 HFM1A2PYH4 1435 aa19.79■□□□□ 0.76
CCDC40-205ENST00000571028 TRIM26Q12899 539 aaPredicted RBP19.79■□□□□ 0.76
CCDC40-205ENST00000571028 FNBP4Q8N3X1 1017 aaPredicted RBP19.78■□□□□ 0.76
CCDC40-205ENST00000571028 SOS2Q07890 1332 aaPredicted RBP19.77■□□□□ 0.76
CCDC40-205ENST00000571028 NALCNQ8IZF0 1738 aa19.77■□□□□ 0.76
CCDC40-205ENST00000571028 ATRNO75882 1429 aa19.76■□□□□ 0.75
CCDC40-205ENST00000571028 ORAI2Q96SN7 254 aa19.76■□□□□ 0.75
CCDC40-205ENST00000571028 LAMC1P11047 1609 aa19.71■□□□□ 0.75
CCDC40-205ENST00000571028 NPHP3Q7Z494 1330 aa19.71■□□□□ 0.75
CCDC40-205ENST00000571028 SPHKAPQ2M3C7 1700 aa19.7■□□□□ 0.74
CCDC40-205ENST00000571028 GJD4Q96KN9 370 aaPredicted RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms