RNA–Protein interactions for RNA: ENST00000570756.5

SMG6-207, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 2,426 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-207ENST00000570756 EIF2AK4Q9P2K8 1649 aaKnown RBP19.91■□□□□ 0.78
SMG6-207ENST00000570756 NBPF1Q3BBV0 1214 aa19.91■□□□□ 0.78
SMG6-207ENST00000570756 FAM135AQ9P2D6 1515 aa19.9■□□□□ 0.78
SMG6-207ENST00000570756 NPM1P06748 294 aaKnown RBP eCLIP19.9■□□□□ 0.78
SMG6-207ENST00000570756 SLFN5Q08AF3 891 aa19.86■□□□□ 0.77
SMG6-207ENST00000570756 MAPK8IP3Q9UPT6 1336 aa19.86■□□□□ 0.77
SMG6-207ENST00000570756 ARHGEF5Q12774 1597 aa19.86■□□□□ 0.77
SMG6-207ENST00000570756 ASXL2Q76L83 1435 aa19.86■□□□□ 0.77
SMG6-207ENST00000570756 A2MP01023 1474 aa19.86■□□□□ 0.77
SMG6-207ENST00000570756 POGKQ9P215 609 aa19.85■□□□□ 0.77
SMG6-207ENST00000570756 PPP2R1AP30153 589 aa19.85■□□□□ 0.77
SMG6-207ENST00000570756 ABCC10Q5T3U5 1492 aa19.84■□□□□ 0.77
SMG6-207ENST00000570756 KNSTRNQ9Y448 316 aa19.84■□□□□ 0.77
SMG6-207ENST00000570756 NKTRP30414 1462 aaKnown RBP19.84■□□□□ 0.77
SMG6-207ENST00000570756 RGL3Q3MIN7 710 aa19.84■□□□□ 0.77
SMG6-207ENST00000570756 USP19O94966 1318 aa19.83■□□□□ 0.77
SMG6-207ENST00000570756 TRMT2AQ8IZ69 625 aaKnown RBP19.82■□□□□ 0.76
SMG6-207ENST00000570756 CCDC141Q6ZP82 1450 aa19.82■□□□□ 0.76
SMG6-207ENST00000570756 CGNL1Q0VF96 1302 aa19.81■□□□□ 0.76
SMG6-207ENST00000570756 MYO5CQ9NQX4 1742 aa19.81■□□□□ 0.76
SMG6-207ENST00000570756 NINLQ9Y2I6 1382 aa19.8■□□□□ 0.76
SMG6-207ENST00000570756 PIK3C2GO75747 1445 aa19.8■□□□□ 0.76
SMG6-207ENST00000570756 WDR7Q9Y4E6 1490 aa19.8■□□□□ 0.76
SMG6-207ENST00000570756 UPF2Q9HAU5 1272 aaKnown RBP19.78■□□□□ 0.76
SMG6-207ENST00000570756 MAGI2Q86UL8 1455 aa19.77■□□□□ 0.76
SMG6-207ENST00000570756 PDE3AQ14432 1141 aa19.77■□□□□ 0.76
SMG6-207ENST00000570756 GLIPR1L2Q4G1C9 344 aa19.77■□□□□ 0.76
SMG6-207ENST00000570756 RRAGDQ9NQL2 400 aaPredicted RBP19.77■□□□□ 0.76
SMG6-207ENST00000570756 E9PSI1 815 aa19.77■□□□□ 0.76
SMG6-207ENST00000570756 SLKQ9H2G2 1235 aaPredicted RBP19.77■□□□□ 0.76
SMG6-207ENST00000570756 RNF17Q9BXT8 1623 aaKnown RBP19.77■□□□□ 0.76
SMG6-207ENST00000570756 TTC37Q6PGP7 1564 aa19.77■□□□□ 0.75
SMG6-207ENST00000570756 PLA2R1Q13018 1463 aa19.76■□□□□ 0.75
SMG6-207ENST00000570756 IGHDP01880 384 aa19.76■□□□□ 0.75
SMG6-207ENST00000570756 CDCA8Q53HL2 280 aa19.76■□□□□ 0.75
SMG6-207ENST00000570756 NGEFQ8N5V2 710 aa19.76■□□□□ 0.75
SMG6-207ENST00000570756 UNC13BO14795 1591 aa19.75■□□□□ 0.75
SMG6-207ENST00000570756 SYNMO15061 1565 aa19.75■□□□□ 0.75
SMG6-207ENST00000570756 HNRNPMP52272 730 aaKnown RBP eCLIP19.75■□□□□ 0.75
SMG6-207ENST00000570756 AMER1Q5JTC6 1135 aaPredicted RBP19.75■□□□□ 0.75
SMG6-207ENST00000570756 ANTXR1Q9H6X2 564 aa19.75■□□□□ 0.75
SMG6-207ENST00000570756 ZMYM3Q14202 1370 aa19.75■□□□□ 0.75
SMG6-207ENST00000570756 RSPH4AQ5TD94 716 aa19.74■□□□□ 0.75
SMG6-207ENST00000570756 NLRP1Q9C000 1473 aa19.74■□□□□ 0.75
SMG6-207ENST00000570756 ASXL1Q8IXJ9 1541 aa19.74■□□□□ 0.75
SMG6-207ENST00000570756 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.74■□□□□ 0.75
SMG6-207ENST00000570756 BCAR3O75815 825 aa19.74■□□□□ 0.75
SMG6-207ENST00000570756 CLUAP1Q96AJ1 413 aa19.74■□□□□ 0.75
SMG6-207ENST00000570756 GOLGA6L3A6NEY3 463 aa19.72■□□□□ 0.75
SMG6-207ENST00000570756 SEC24BO95487 1268 aa19.72■□□□□ 0.75
SMG6-207ENST00000570756 NPC1L1Q9UHC9 1359 aa19.72■□□□□ 0.75
SMG6-207ENST00000570756 PLXNC1O60486 1568 aa19.72■□□□□ 0.75
SMG6-207ENST00000570756 AAMPQ13685 434 aa19.71■□□□□ 0.75
SMG6-207ENST00000570756 CANXP27824 592 aaKnown RBP19.7■□□□□ 0.74
SMG6-207ENST00000570756 CCDC146Q8IYE0 955 aa19.7■□□□□ 0.74
SMG6-207ENST00000570756 ATP10AO60312 1499 aa19.69■□□□□ 0.74
SMG6-207ENST00000570756 APAF1O14727 1248 aa19.69■□□□□ 0.74
SMG6-207ENST00000570756 SPINK5Q9NQ38 1064 aaPredicted RBP19.69■□□□□ 0.74
SMG6-207ENST00000570756 IQGAP3Q86VI3 1631 aa19.69■□□□□ 0.74
SMG6-207ENST00000570756 CENPJQ9HC77 1338 aaPredicted RBP19.69■□□□□ 0.74
SMG6-207ENST00000570756 PMFBP1Q8TBY8 1022 aa19.68■□□□□ 0.74
SMG6-207ENST00000570756 TBC1D32Q96NH3 1257 aa19.68■□□□□ 0.74
SMG6-207ENST00000570756 PNNQ9H307 717 aaKnown RBP19.68■□□□□ 0.74
SMG6-207ENST00000570756 FAM69CQ0P6D2 419 aa19.68■□□□□ 0.74
SMG6-207ENST00000570756 FSD2A1L4K1 749 aa19.67■□□□□ 0.74
SMG6-207ENST00000570756 IQGAP1P46940 1657 aa19.67■□□□□ 0.74
SMG6-207ENST00000570756 CLCN1P35523 988 aa19.67■□□□□ 0.74
SMG6-207ENST00000570756 XRCC6P12956 609 aaKnown RBP eCLIP19.66■□□□□ 0.74
SMG6-207ENST00000570756 SAMD9LQ8IVG5 1584 aa19.66■□□□□ 0.74
SMG6-207ENST00000570756 TBC1D2Q9BYX2 928 aa19.65■□□□□ 0.74
SMG6-207ENST00000570756 MAST1Q9Y2H9 1570 aa19.65■□□□□ 0.74
SMG6-207ENST00000570756 NAP1L5Q96NT1 182 aaPredicted RBP19.65■□□□□ 0.74
SMG6-207ENST00000570756 COG6Q9Y2V7 657 aa19.64■□□□□ 0.74
SMG6-207ENST00000570756 CDC42BPBQ9Y5S2 1711 aa19.64■□□□□ 0.73
SMG6-207ENST00000570756 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.64■□□□□ 0.73
SMG6-207ENST00000570756 PREX2Q70Z35 1606 aa19.64■□□□□ 0.73
SMG6-207ENST00000570756 MCM4P33991 863 aa19.63■□□□□ 0.73
SMG6-207ENST00000570756 PANK1Q8TE04 598 aa19.62■□□□□ 0.73
SMG6-207ENST00000570756 ARHGAP5Q13017 1502 aa19.61■□□□□ 0.73
SMG6-207ENST00000570756 TSPOAP1O95153 1857 aa19.61■□□□□ 0.73
SMG6-207ENST00000570756 DIP2BQ9P265 1576 aa19.61■□□□□ 0.73
SMG6-207ENST00000570756 ABCA9Q8IUA7 1624 aa19.61■□□□□ 0.73
SMG6-207ENST00000570756 MADDQ8WXG6 1647 aa19.61■□□□□ 0.73
SMG6-207ENST00000570756 SCAF11Q99590 1463 aaKnown RBP19.61■□□□□ 0.73
SMG6-207ENST00000570756 MRE11P49959 708 aa19.6■□□□□ 0.73
SMG6-207ENST00000570756 MYOM1P52179 1685 aa19.6■□□□□ 0.73
SMG6-207ENST00000570756 HSP90AA1P07900 732 aaKnown RBP19.6■□□□□ 0.73
SMG6-207ENST00000570756 RRP9O43818 475 aaKnown RBP19.59■□□□□ 0.73
SMG6-207ENST00000570756 TRHP20396 242 aaPredicted RBP19.59■□□□□ 0.73
SMG6-207ENST00000570756 ARXQ96QS3 562 aa19.59■□□□□ 0.73
SMG6-207ENST00000570756 CHMP5Q9NZZ3 219 aa19.59■□□□□ 0.73
SMG6-207ENST00000570756 CD109Q6YHK3 1445 aa19.59■□□□□ 0.73
SMG6-207ENST00000570756 PKNOX2Q96KN3 472 aa19.59■□□□□ 0.73
SMG6-207ENST00000570756 ISY1Q9ULR0 285 aaKnown RBP19.59■□□□□ 0.73
SMG6-207ENST00000570756 SCAPERQ9BY12 1400 aa19.58■□□□□ 0.72
SMG6-207ENST00000570756 KIF13AQ9H1H9 1805 aa19.57■□□□□ 0.72
SMG6-207ENST00000570756 KDM5AP29375 1690 aaKnown RBP19.57■□□□□ 0.72
SMG6-207ENST00000570756 PLCH2O75038 1416 aa19.57■□□□□ 0.72
SMG6-207ENST00000570756 HSP90AA2PQ14568 343 aaPredicted RBP19.57■□□□□ 0.72
SMG6-207ENST00000570756 STAC3Q96MF2 364 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 83.4 ms