RNA–Protein interactions for RNA: ENST00000570177.6

TCF4-245, Transcript of transcription factor 4, humanhuman

TSL 2 BASIC

Gene TCF4, Length 1,872 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-245ENST00000570177 CCDC7Q96M83 1385 aa13.78□□□□□ -0.2
TCF4-245ENST00000570177 STAC3Q96MF2 364 aa13.78□□□□□ -0.2
TCF4-245ENST00000570177 PIK3C2BO00750 1634 aa13.78□□□□□ -0.2
TCF4-245ENST00000570177 MROH2AA6NES4 1674 aa13.78□□□□□ -0.2
TCF4-245ENST00000570177 ROCK2O75116 1388 aaKnown RBP13.77□□□□□ -0.2
TCF4-245ENST00000570177 UBE2Q2Q8WVN8 375 aa13.77□□□□□ -0.21
TCF4-245ENST00000570177 KIF7Q2M1P5 1343 aa13.77□□□□□ -0.21
TCF4-245ENST00000570177 FBXO31Q5XUX0 539 aaPredicted RBP13.76□□□□□ -0.21
TCF4-245ENST00000570177 LAMC1P11047 1609 aa13.75□□□□□ -0.21
TCF4-245ENST00000570177 NRXN1Q9ULB1 1477 aa13.75□□□□□ -0.21
TCF4-245ENST00000570177 ADGRF5Q8IZF2 1346 aa13.75□□□□□ -0.21
TCF4-245ENST00000570177 ST20-MTHFSA0A0A6YYL1 179 aa13.75□□□□□ -0.21
TCF4-245ENST00000570177 IDI1Q13907 227 aa13.75□□□□□ -0.21
TCF4-245ENST00000570177 MYOM2P54296 1465 aa13.75□□□□□ -0.21
TCF4-245ENST00000570177 KIF1BO60333 1816 aa13.75□□□□□ -0.21
TCF4-245ENST00000570177 IFT172Q9UG01 1749 aa13.75□□□□□ -0.21
TCF4-245ENST00000570177 TRHP20396 242 aaPredicted RBP13.74□□□□□ -0.21
TCF4-245ENST00000570177 PREX1Q8TCU6 1659 aa13.73□□□□□ -0.21
TCF4-245ENST00000570177 ERVK-7P63135 1459 aa13.73□□□□□ -0.21
TCF4-245ENST00000570177 MLECQ14165 292 aa13.72□□□□□ -0.21
TCF4-245ENST00000570177 TESK2Q96S53 571 aa13.72□□□□□ -0.21
TCF4-245ENST00000570177 SLC52A1Q9NWF4 448 aa13.72□□□□□ -0.21
TCF4-245ENST00000570177 CLTCQ00610 1675 aaKnown RBP13.71□□□□□ -0.22
TCF4-245ENST00000570177 RPGRIP1LQ68CZ1 1315 aa13.7□□□□□ -0.22
TCF4-245ENST00000570177 POLR1AO95602 1720 aaPredicted RBP13.7□□□□□ -0.22
TCF4-245ENST00000570177 PPLO60437 1756 aa13.69□□□□□ -0.22
TCF4-245ENST00000570177 CHGAP10645 457 aaKnown RBP13.69□□□□□ -0.22
TCF4-245ENST00000570177 CFAP70Q5T0N1 1121 aa13.69□□□□□ -0.22
TCF4-245ENST00000570177 SPATA31D1Q6ZQQ2 1576 aa13.68□□□□□ -0.22
TCF4-245ENST00000570177 ARID4BQ4LE39 1312 aaPredicted RBP13.68□□□□□ -0.22
TCF4-245ENST00000570177 KIAA1210Q9ULL0 1709 aa13.68□□□□□ -0.22
TCF4-245ENST00000570177 TMEM131LA2VDJ0 1609 aa13.68□□□□□ -0.22
TCF4-245ENST00000570177 NEXMIFQ5QGS0 1516 aa13.68□□□□□ -0.22
TCF4-245ENST00000570177 ZMYM3Q14202 1370 aa13.68□□□□□ -0.22
TCF4-245ENST00000570177 PIK3C2GO75747 1445 aa13.67□□□□□ -0.22
TCF4-245ENST00000570177 IQGAP1P46940 1657 aa13.67□□□□□ -0.22
TCF4-245ENST00000570177 C14orf93Q9H972 538 aaKnown RBP13.65□□□□□ -0.22
TCF4-245ENST00000570177 SCAF11Q99590 1463 aaKnown RBP13.65□□□□□ -0.22
TCF4-245ENST00000570177 ZFYVE9O95405 1425 aa13.65□□□□□ -0.22
TCF4-245ENST00000570177 MYO5BQ9ULV0 1848 aa13.63□□□□□ -0.23
TCF4-245ENST00000570177 DISP3Q9P2K9 1392 aa13.63□□□□□ -0.23
TCF4-245ENST00000570177 ADGRB1O14514 1584 aa13.63□□□□□ -0.23
TCF4-245ENST00000570177 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
TCF4-245ENST00000570177 ANP32CO43423 234 aa13.61□□□□□ -0.23
TCF4-245ENST00000570177 A2ML1A8K2U0 1454 aa13.61□□□□□ -0.23
TCF4-245ENST00000570177 SETBP1Q9Y6X0 1596 aa13.61□□□□□ -0.23
TCF4-245ENST00000570177 VGFO15240 615 aaPredicted RBP13.61□□□□□ -0.23
TCF4-245ENST00000570177 PIAS4Q8N2W9 510 aaPredicted RBP13.61□□□□□ -0.23
TCF4-245ENST00000570177 CCER2I3L3R5 266 aa13.6□□□□□ -0.23
TCF4-245ENST00000570177 TMEM132EQ6IEE7 984 aa13.57□□□□□ -0.24
TCF4-245ENST00000570177 PRKRIP1Q9H875 184 aaPredicted RBP13.57□□□□□ -0.24
TCF4-245ENST00000570177 TNRQ92752 1358 aa13.57□□□□□ -0.24
TCF4-245ENST00000570177 POLR3GLQ9BT43 218 aa13.57□□□□□ -0.24
TCF4-245ENST00000570177 ESF1Q9H501 851 aaKnown RBP13.57□□□□□ -0.24
TCF4-245ENST00000570177 ASXL1Q8IXJ9 1541 aa13.57□□□□□ -0.24
TCF4-245ENST00000570177 CEBPAP49715 358 aaPredicted RBP13.56□□□□□ -0.24
TCF4-245ENST00000570177 YTHDC1Q96MU7 727 aaKnown RBP13.56□□□□□ -0.24
TCF4-245ENST00000570177 PER1O15534 1290 aaPredicted RBP13.55□□□□□ -0.24
TCF4-245ENST00000570177 TMF1P82094 1093 aa13.55□□□□□ -0.24
TCF4-245ENST00000570177 MYO3AQ8NEV4 1616 aa13.55□□□□□ -0.24
TCF4-245ENST00000570177 CCDC184Q52MB2 194 aa13.55□□□□□ -0.24
TCF4-245ENST00000570177 RIMS2Q9UQ26 1411 aa13.54□□□□□ -0.24
TCF4-245ENST00000570177 TRAK1Q9UPV9 953 aa13.53□□□□□ -0.24
TCF4-245ENST00000570177 SBNO2Q9Y2G9 1366 aa13.53□□□□□ -0.24
TCF4-245ENST00000570177 EIF3AQ14152 1382 aaKnown RBP13.53□□□□□ -0.24
TCF4-245ENST00000570177 PTPRMP28827 1452 aa13.52□□□□□ -0.25
TCF4-245ENST00000570177 C3P01024 1663 aa13.51□□□□□ -0.25
TCF4-245ENST00000570177 STAG3Q9UJ98 1225 aa13.51□□□□□ -0.25
TCF4-245ENST00000570177 ALKQ9UM73 1620 aa13.51□□□□□ -0.25
TCF4-245ENST00000570177 KDM5AP29375 1690 aaKnown RBP13.5□□□□□ -0.25
TCF4-245ENST00000570177 CENPJQ9HC77 1338 aaPredicted RBP13.5□□□□□ -0.25
TCF4-245ENST00000570177 FER1L4A9Z1Z3 1794 aa13.49□□□□□ -0.25
TCF4-245ENST00000570177 UBR1Q8IWV7 1749 aa13.49□□□□□ -0.25
TCF4-245ENST00000570177 NLRP1Q9C000 1473 aa13.49□□□□□ -0.25
TCF4-245ENST00000570177 TMEM2Q9UHN6 1383 aa13.49□□□□□ -0.25
TCF4-245ENST00000570177 PANK3Q9H999 370 aa13.48□□□□□ -0.25
TCF4-245ENST00000570177 NRXN3Q9Y4C0 1643 aa13.48□□□□□ -0.25
TCF4-245ENST00000570177 SETD1AO15047 1707 aaKnown RBP13.48□□□□□ -0.25
TCF4-245ENST00000570177 ARXQ96QS3 562 aa13.48□□□□□ -0.25
TCF4-245ENST00000570177 ARHGEF28Q8N1W1 1705 aaKnown RBP13.47□□□□□ -0.25
TCF4-245ENST00000570177 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.25
TCF4-245ENST00000570177 MYOM1P52179 1685 aa13.46□□□□□ -0.26
TCF4-245ENST00000570177 LTKP29376 864 aa13.46□□□□□ -0.26
TCF4-245ENST00000570177 CDCA8Q53HL2 280 aa13.46□□□□□ -0.26
TCF4-245ENST00000570177 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.46□□□□□ -0.26
TCF4-245ENST00000570177 ADAMTSL3P82987 1691 aa13.45□□□□□ -0.26
TCF4-245ENST00000570177 QRICH2Q9H0J4 1663 aa13.45□□□□□ -0.26
TCF4-245ENST00000570177 ERICH6BQ5W0A0 696 aa13.44□□□□□ -0.26
TCF4-245ENST00000570177 ARHGAP23Q9P227 1491 aa13.44□□□□□ -0.26
TCF4-245ENST00000570177 METP08581 1390 aa13.44□□□□□ -0.26
TCF4-245ENST00000570177 PARD3Q8TEW0 1356 aa13.44□□□□□ -0.26
TCF4-245ENST00000570177 STK26Q9P289 416 aa13.44□□□□□ -0.26
TCF4-245ENST00000570177 TULP4Q9NRJ4 1543 aa13.43□□□□□ -0.26
TCF4-245ENST00000570177 ADAMTS13Q76LX8 1427 aa13.43□□□□□ -0.26
TCF4-245ENST00000570177 LRPPRCP42704 1394 aaKnown RBP13.42□□□□□ -0.26
TCF4-245ENST00000570177 SLIT1O75093 1534 aa13.42□□□□□ -0.26
TCF4-245ENST00000570177 PUS7Q96PZ0 661 aaKnown RBP13.42□□□□□ -0.26
TCF4-245ENST00000570177 CARD14Q9BXL6 1004 aa13.42□□□□□ -0.26
TCF4-245ENST00000570177 MED14O60244 1454 aa13.41□□□□□ -0.26
TCF4-245ENST00000570177 ABCC11Q96J66 1382 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms