RNA–Protein interactions for RNA: ENST00000569506.1

NEIL1-223, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 593 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-223ENST00000569506 TNRQ92752 1358 aa23.37■■□□□ 1.33
NEIL1-223ENST00000569506 PPP1R15AO75807 674 aaPredicted RBP23.36■■□□□ 1.33
NEIL1-223ENST00000569506 HSPA1LP34931 641 aa23.36■■□□□ 1.33
NEIL1-223ENST00000569506 IDI1Q13907 227 aa23.36■■□□□ 1.33
NEIL1-223ENST00000569506 KIF1BO60333 1816 aa23.36■■□□□ 1.33
NEIL1-223ENST00000569506 TOM1O60784 492 aa23.35■■□□□ 1.33
NEIL1-223ENST00000569506 SCAF1Q9H7N4 1312 aaKnown RBP23.34■■□□□ 1.33
NEIL1-223ENST00000569506 RGL3Q3MIN7 710 aa23.33■■□□□ 1.33
NEIL1-223ENST00000569506 PIP4K2BP78356 416 aa23.32■■□□□ 1.32
NEIL1-223ENST00000569506 ADGRB3O60242 1522 aa23.32■■□□□ 1.32
NEIL1-223ENST00000569506 CHGAP10645 457 aaKnown RBP23.31■■□□□ 1.32
NEIL1-223ENST00000569506 STAC3Q96MF2 364 aa23.31■■□□□ 1.32
NEIL1-223ENST00000569506 DCAF11Q8TEB1 546 aa23.29■■□□□ 1.32
NEIL1-223ENST00000569506 NLRP1Q9C000 1473 aa23.28■■□□□ 1.32
NEIL1-223ENST00000569506 RPGRIP1LQ68CZ1 1315 aa23.28■■□□□ 1.32
NEIL1-223ENST00000569506 ZNF326Q5BKZ1 582 aaKnown RBP23.26■■□□□ 1.31
NEIL1-223ENST00000569506 STAG3Q9UJ98 1225 aa23.26■■□□□ 1.31
NEIL1-223ENST00000569506 MED14O60244 1454 aa23.25■■□□□ 1.31
NEIL1-223ENST00000569506 ANKLE2Q86XL3 938 aa23.25■■□□□ 1.31
NEIL1-223ENST00000569506 TMEM131LA2VDJ0 1609 aa23.25■■□□□ 1.31
NEIL1-223ENST00000569506 ALKQ9UM73 1620 aa23.25■■□□□ 1.31
NEIL1-223ENST00000569506 KDM2AQ9Y2K7 1162 aa23.24■■□□□ 1.31
NEIL1-223ENST00000569506 THEMISQ8N1K5 641 aaPredicted RBP23.23■■□□□ 1.31
NEIL1-223ENST00000569506 NPHP4O75161 1426 aaPredicted RBP23.22■■□□□ 1.31
NEIL1-223ENST00000569506 KDM5AP29375 1690 aaKnown RBP23.21■■□□□ 1.31
NEIL1-223ENST00000569506 IQGAP1P46940 1657 aa23.21■■□□□ 1.31
NEIL1-223ENST00000569506 PHF23Q9BUL5 403 aaPredicted RBP23.19■■□□□ 1.3
NEIL1-223ENST00000569506 MYOM2P54296 1465 aa23.18■■□□□ 1.3
NEIL1-223ENST00000569506 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
NEIL1-223ENST00000569506 IFT172Q9UG01 1749 aa23.17■■□□□ 1.3
NEIL1-223ENST00000569506 MYO5BQ9ULV0 1848 aa23.17■■□□□ 1.3
NEIL1-223ENST00000569506 PRAG1Q86YV5 1406 aa23.16■■□□□ 1.3
NEIL1-223ENST00000569506 NEXMIFQ5QGS0 1516 aa23.16■■□□□ 1.3
NEIL1-223ENST00000569506 STRCP1A6NGW2 1772 aa23.15■■□□□ 1.3
NEIL1-223ENST00000569506 PPLO60437 1756 aa23.15■■□□□ 1.3
NEIL1-223ENST00000569506 VGFO15240 615 aaPredicted RBP23.15■■□□□ 1.3
NEIL1-223ENST00000569506 UBR1Q8IWV7 1749 aa23.15■■□□□ 1.3
NEIL1-223ENST00000569506 HDGFP51858 240 aaKnown RBP23.14■■□□□ 1.29
NEIL1-223ENST00000569506 ZFYVE9O95405 1425 aa23.14■■□□□ 1.29
NEIL1-223ENST00000569506 LRRC7Q96NW7 1537 aa23.13■■□□□ 1.29
NEIL1-223ENST00000569506 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.12■■□□□ 1.29
NEIL1-223ENST00000569506 NRXN1Q9ULB1 1477 aa23.11■■□□□ 1.29
NEIL1-223ENST00000569506 RIMS2Q9UQ26 1411 aa23.11■■□□□ 1.29
NEIL1-223ENST00000569506 ADGRF5Q8IZF2 1346 aa23.1■■□□□ 1.29
NEIL1-223ENST00000569506 TMEM2Q9UHN6 1383 aa23.1■■□□□ 1.29
NEIL1-223ENST00000569506 RALGAPBQ86X10 1494 aa23.1■■□□□ 1.29
NEIL1-223ENST00000569506 TRPM1Q7Z4N2 1603 aa23.05■■□□□ 1.28
NEIL1-223ENST00000569506 SLIT1O75093 1534 aa23.05■■□□□ 1.28
NEIL1-223ENST00000569506 NUTM2DQ5VT03 806 aaPredicted RBP23.05■■□□□ 1.28
NEIL1-223ENST00000569506 PIK3C2GO75747 1445 aa23.05■■□□□ 1.28
NEIL1-223ENST00000569506 ARHGAP23Q9P227 1491 aa23.05■■□□□ 1.28
NEIL1-223ENST00000569506 KIAA1210Q9ULL0 1709 aa23.04■■□□□ 1.28
NEIL1-223ENST00000569506 EID1Q9Y6B2 187 aa23.03■■□□□ 1.28
NEIL1-223ENST00000569506 ROCK2O75116 1388 aaKnown RBP23.02■■□□□ 1.28
NEIL1-223ENST00000569506 GPRASP1Q5JY77 1395 aa23.01■■□□□ 1.27
NEIL1-223ENST00000569506 C14orf93Q9H972 538 aaKnown RBP23.01■■□□□ 1.27
NEIL1-223ENST00000569506 SCAF11Q99590 1463 aaKnown RBP23■■□□□ 1.27
NEIL1-223ENST00000569506 CFAP70Q5T0N1 1121 aa23■■□□□ 1.27
NEIL1-223ENST00000569506 TXNDC2Q86VQ3 553 aa23■■□□□ 1.27
NEIL1-223ENST00000569506 CARD11Q9BXL7 1154 aa23■■□□□ 1.27
NEIL1-223ENST00000569506 NBPF1Q3BBV0 1214 aa22.99■■□□□ 1.27
NEIL1-223ENST00000569506 SENP3Q9H4L4 574 aaPredicted RBP22.99■■□□□ 1.27
NEIL1-223ENST00000569506 XIRP1Q702N8 1843 aaKnown RBP22.98■■□□□ 1.27
NEIL1-223ENST00000569506 LAMC1P11047 1609 aa22.97■■□□□ 1.27
NEIL1-223ENST00000569506 LTKP29376 864 aa22.96■■□□□ 1.27
NEIL1-223ENST00000569506 EIF4G2P78344 907 aaKnown RBP eCLIP22.96■■□□□ 1.27
NEIL1-223ENST00000569506 PLEKHG1Q9ULL1 1385 aa22.96■■□□□ 1.27
NEIL1-223ENST00000569506 SETBP1Q9Y6X0 1596 aa22.94■■□□□ 1.26
NEIL1-223ENST00000569506 RGS17Q9UGC6 210 aaPredicted RBP22.94■■□□□ 1.26
NEIL1-223ENST00000569506 USP47Q96K76 1375 aa22.91■■□□□ 1.26
NEIL1-223ENST00000569506 ZNF316A6NFI3 1004 aaPredicted RBP22.91■■□□□ 1.26
NEIL1-223ENST00000569506 BCANQ96GW7 911 aa22.91■■□□□ 1.26
NEIL1-223ENST00000569506 HSPA5P11021 654 aaKnown RBP22.9■■□□□ 1.26
NEIL1-223ENST00000569506 FAM135BQ49AJ0 1406 aa22.89■■□□□ 1.25
NEIL1-223ENST00000569506 ADGRB1O14514 1584 aa22.89■■□□□ 1.25
NEIL1-223ENST00000569506 NRXN3Q9Y4C0 1643 aa22.88■■□□□ 1.25
NEIL1-223ENST00000569506 TMEM132EQ6IEE7 984 aa22.86■■□□□ 1.25
NEIL1-223ENST00000569506 ADAMTS13Q76LX8 1427 aa22.85■■□□□ 1.25
NEIL1-223ENST00000569506 TBX22Q9Y458 520 aa22.84■■□□□ 1.25
NEIL1-223ENST00000569506 EIF3AQ14152 1382 aaKnown RBP22.84■■□□□ 1.25
NEIL1-223ENST00000569506 SETD1AO15047 1707 aaKnown RBP22.83■■□□□ 1.25
NEIL1-223ENST00000569506 DIP2AQ14689 1571 aa22.83■■□□□ 1.25
NEIL1-223ENST00000569506 ASXL1Q8IXJ9 1541 aa22.82■■□□□ 1.24
NEIL1-223ENST00000569506 ROBO1Q9Y6N7 1651 aa22.81■■□□□ 1.24
NEIL1-223ENST00000569506 ST20-MTHFSA0A0A6YYL1 179 aa22.81■■□□□ 1.24
NEIL1-223ENST00000569506 HIRIP3Q9BW71 556 aaPredicted RBP22.8■■□□□ 1.24
NEIL1-223ENST00000569506 YTHDC2Q9H6S0 1430 aaKnown RBP22.8■■□□□ 1.24
NEIL1-223ENST00000569506 METP08581 1390 aa22.79■■□□□ 1.24
NEIL1-223ENST00000569506 LRPPRCP42704 1394 aaKnown RBP22.79■■□□□ 1.24
NEIL1-223ENST00000569506 TMEM94Q12767 1356 aa22.79■■□□□ 1.24
NEIL1-223ENST00000569506 SLC26A8Q96RN1 970 aa22.79■■□□□ 1.24
NEIL1-223ENST00000569506 TRAK1Q9UPV9 953 aa22.79■■□□□ 1.24
NEIL1-223ENST00000569506 POTEAQ6S8J7 498 aa22.78■■□□□ 1.24
NEIL1-223ENST00000569506 ABCC11Q96J66 1382 aa22.76■■□□□ 1.23
NEIL1-223ENST00000569506 STK26Q9P289 416 aa22.76■■□□□ 1.23
NEIL1-223ENST00000569506 PIK3R4Q99570 1358 aa22.76■■□□□ 1.23
NEIL1-223ENST00000569506 SLC24A1O60721 1099 aa22.75■■□□□ 1.23
NEIL1-223ENST00000569506 KCNA6P17658 529 aa22.75■■□□□ 1.23
NEIL1-223ENST00000569506 NKTRP30414 1462 aaKnown RBP22.74■■□□□ 1.23
NEIL1-223ENST00000569506 DLC1Q96QB1 1528 aa22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms