RNA–Protein interactions for RNA: ENST00000569045.1

CDR2-207, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 826 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-207ENST00000569045 RRBP1Q9P2E9 1410 aaKnown RBP25.19■■□□□ 1.62
CDR2-207ENST00000569045 KCNA6P17658 529 aa25.18■■□□□ 1.62
CDR2-207ENST00000569045 RIMS2Q9UQ26 1411 aa25.17■■□□□ 1.62
CDR2-207ENST00000569045 TMEM131LA2VDJ0 1609 aa25.16■■□□□ 1.62
CDR2-207ENST00000569045 PLEKHG1Q9ULL1 1385 aa25.15■■□□□ 1.62
CDR2-207ENST00000569045 MYO5BQ9ULV0 1848 aa25.14■■□□□ 1.62
CDR2-207ENST00000569045 ZFYVE9O95405 1425 aa25.14■■□□□ 1.62
CDR2-207ENST00000569045 PROSER2Q86WR7 435 aaPredicted RBP25.14■■□□□ 1.62
CDR2-207ENST00000569045 ALKQ9UM73 1620 aa25.11■■□□□ 1.61
CDR2-207ENST00000569045 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
CDR2-207ENST00000569045 SENP3Q9H4L4 574 aaPredicted RBP25.1■■□□□ 1.61
CDR2-207ENST00000569045 NKTRP30414 1462 aaKnown RBP25.09■■□□□ 1.61
CDR2-207ENST00000569045 XIRP1Q702N8 1843 aaKnown RBP25.07■■□□□ 1.6
CDR2-207ENST00000569045 TBX22Q9Y458 520 aa25.06■■□□□ 1.6
CDR2-207ENST00000569045 NWD1Q149M9 1564 aa25.05■■□□□ 1.6
CDR2-207ENST00000569045 NAIPQ13075 1403 aa25.05■■□□□ 1.6
CDR2-207ENST00000569045 ILDR2Q71H61 639 aa25.05■■□□□ 1.6
CDR2-207ENST00000569045 NUTM2DQ5VT03 806 aaPredicted RBP25.04■■□□□ 1.6
CDR2-207ENST00000569045 SPHKAPQ2M3C7 1700 aa25.03■■□□□ 1.6
CDR2-207ENST00000569045 ZNF326Q5BKZ1 582 aaKnown RBP25.02■■□□□ 1.6
CDR2-207ENST00000569045 TRIM52Q96A61 297 aa25.02■■□□□ 1.6
CDR2-207ENST00000569045 MSH6P52701 1360 aa25.02■■□□□ 1.6
CDR2-207ENST00000569045 RBM33Q96EV2 1170 aaKnown RBP25■■□□□ 1.59
CDR2-207ENST00000569045 HFM1A2PYH4 1435 aa25■■□□□ 1.59
CDR2-207ENST00000569045 DIP2AQ14689 1571 aa25■■□□□ 1.59
CDR2-207ENST00000569045 CHD2O14647 1828 aaKnown RBP25■■□□□ 1.59
CDR2-207ENST00000569045 MED1Q15648 1581 aaPredicted RBP24.98■■□□□ 1.59
CDR2-207ENST00000569045 FAM135BQ49AJ0 1406 aa24.98■■□□□ 1.59
CDR2-207ENST00000569045 PIK3R4Q99570 1358 aa24.98■■□□□ 1.59
CDR2-207ENST00000569045 SOCS7O14512 581 aa24.97■■□□□ 1.59
CDR2-207ENST00000569045 C14orf37Q86TY3 774 aa24.97■■□□□ 1.59
CDR2-207ENST00000569045 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
CDR2-207ENST00000569045 ADAMTS13Q76LX8 1427 aa24.95■■□□□ 1.59
CDR2-207ENST00000569045 TRPM2O94759 1503 aa24.94■■□□□ 1.58
CDR2-207ENST00000569045 SLC4A1APQ9BWU0 796 aaKnown RBP24.93■■□□□ 1.58
CDR2-207ENST00000569045 NCOA3Q9Y6Q9 1424 aa24.93■■□□□ 1.58
CDR2-207ENST00000569045 SLAIN2Q9P270 581 aa24.91■■□□□ 1.58
CDR2-207ENST00000569045 CLTCL1P53675 1640 aa24.89■■□□□ 1.57
CDR2-207ENST00000569045 KIF1BO60333 1816 aa24.89■■□□□ 1.57
CDR2-207ENST00000569045 ROBO1Q9Y6N7 1651 aa24.88■■□□□ 1.57
CDR2-207ENST00000569045 AMOTL2Q9Y2J4 779 aa24.88■■□□□ 1.57
CDR2-207ENST00000569045 SETBP1Q9Y6X0 1596 aa24.86■■□□□ 1.57
CDR2-207ENST00000569045 ATF3P18847 181 aa24.86■■□□□ 1.57
CDR2-207ENST00000569045 C19orf44Q9H6X5 657 aa24.86■■□□□ 1.57
CDR2-207ENST00000569045 CADPS2Q86UW7 1296 aa24.85■■□□□ 1.57
CDR2-207ENST00000569045 VGFO15240 615 aaPredicted RBP24.82■■□□□ 1.56
CDR2-207ENST00000569045 NEXMIFQ5QGS0 1516 aa24.81■■□□□ 1.56
CDR2-207ENST00000569045 ACIN1Q9UKV3 1341 aaKnown RBP24.81■■□□□ 1.56
CDR2-207ENST00000569045 PTPRUQ92729 1446 aa24.8■■□□□ 1.56
CDR2-207ENST00000569045 NRXN3Q9Y4C0 1643 aa24.8■■□□□ 1.56
CDR2-207ENST00000569045 RPGRIP1LQ68CZ1 1315 aa24.8■■□□□ 1.56
CDR2-207ENST00000569045 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.77■■□□□ 1.56
CDR2-207ENST00000569045 METP08581 1390 aa24.76■■□□□ 1.55
CDR2-207ENST00000569045 PHLPP1O60346 1717 aa24.75■■□□□ 1.55
CDR2-207ENST00000569045 XRN1Q8IZH2 1706 aaKnown RBP24.75■■□□□ 1.55
CDR2-207ENST00000569045 DCCP43146 1447 aa24.73■■□□□ 1.55
CDR2-207ENST00000569045 MPHOSPH9Q99550 1183 aa24.73■■□□□ 1.55
CDR2-207ENST00000569045 CCDC144AA2RUR9 1427 aa24.72■■□□□ 1.55
CDR2-207ENST00000569045 FOXD1Q16676 465 aa24.72■■□□□ 1.55
CDR2-207ENST00000569045 JCADQ9P266 1359 aa24.71■■□□□ 1.55
CDR2-207ENST00000569045 SETD5Q9C0A6 1442 aa24.67■■□□□ 1.54
CDR2-207ENST00000569045 PPLO60437 1756 aa24.65■■□□□ 1.54
CDR2-207ENST00000569045 ADGRL3Q9HAR2 1447 aa24.65■■□□□ 1.54
CDR2-207ENST00000569045 RGL3Q3MIN7 710 aa24.64■■□□□ 1.54
CDR2-207ENST00000569045 BRINP3Q76B58 766 aa24.64■■□□□ 1.54
CDR2-207ENST00000569045 COL16A1Q07092 1604 aaPredicted RBP24.64■■□□□ 1.53
CDR2-207ENST00000569045 AHDC1Q5TGY3 1603 aaPredicted RBP24.64■■□□□ 1.53
CDR2-207ENST00000569045 PTCH1Q13635 1447 aa24.62■■□□□ 1.53
CDR2-207ENST00000569045 ANKRD30BQ9BXX2 1392 aa24.61■■□□□ 1.53
CDR2-207ENST00000569045 SPATA31A6Q5VVP1 1343 aa24.61■■□□□ 1.53
CDR2-207ENST00000569045 RGS17Q9UGC6 210 aaPredicted RBP24.6■■□□□ 1.53
CDR2-207ENST00000569045 MST1RQ04912 1400 aa24.6■■□□□ 1.53
CDR2-207ENST00000569045 SETD1AO15047 1707 aaKnown RBP24.58■■□□□ 1.53
CDR2-207ENST00000569045 ASXL1Q8IXJ9 1541 aa24.58■■□□□ 1.53
CDR2-207ENST00000569045 MEX3CQ5U5Q3 659 aaKnown RBP24.58■■□□□ 1.53
CDR2-207ENST00000569045 SPATA31E1Q6ZUB1 1445 aa24.58■■□□□ 1.53
CDR2-207ENST00000569045 NALCNQ8IZF0 1738 aa24.57■■□□□ 1.52
CDR2-207ENST00000569045 ROBO2Q9HCK4 1378 aa24.56■■□□□ 1.52
CDR2-207ENST00000569045 PRAG1Q86YV5 1406 aa24.55■■□□□ 1.52
CDR2-207ENST00000569045 ADGRF5Q8IZF2 1346 aa24.55■■□□□ 1.52
CDR2-207ENST00000569045 RAB3GAP2Q9H2M9 1393 aa24.54■■□□□ 1.52
CDR2-207ENST00000569045 SHPRHQ149N8 1683 aa24.53■■□□□ 1.52
CDR2-207ENST00000569045 LRRC59Q96AG4 307 aaKnown RBP24.53■■□□□ 1.52
CDR2-207ENST00000569045 POTEAQ6S8J7 498 aa24.5■■□□□ 1.51
CDR2-207ENST00000569045 C1orf167Q5SNV9 1468 aa24.5■■□□□ 1.51
CDR2-207ENST00000569045 NHSL1Q5SYE7 1610 aa24.5■■□□□ 1.51
CDR2-207ENST00000569045 IFT172Q9UG01 1749 aa24.49■■□□□ 1.51
CDR2-207ENST00000569045 STK26Q9P289 416 aa24.49■■□□□ 1.51
CDR2-207ENST00000569045 NUTM2BA6NNL0 878 aaPredicted RBP24.47■■□□□ 1.51
CDR2-207ENST00000569045 NUTM2EB1AL46 878 aaPredicted RBP24.47■■□□□ 1.51
CDR2-207ENST00000569045 ZNF772Q68DY9 489 aaPredicted RBP24.47■■□□□ 1.51
CDR2-207ENST00000569045 NUTM2AQ8IVF1 878 aaPredicted RBP24.47■■□□□ 1.51
CDR2-207ENST00000569045 PIK3C2GO75747 1445 aa24.46■■□□□ 1.51
CDR2-207ENST00000569045 LRPPRCP42704 1394 aaKnown RBP24.46■■□□□ 1.51
CDR2-207ENST00000569045 LRP6O75581 1613 aa24.46■■□□□ 1.51
CDR2-207ENST00000569045 ABCC11Q96J66 1382 aa24.43■■□□□ 1.5
CDR2-207ENST00000569045 TMEM132EQ6IEE7 984 aa24.43■■□□□ 1.5
CDR2-207ENST00000569045 DDX17Q92841 729 aaKnown RBP24.43■■□□□ 1.5
CDR2-207ENST00000569045 TECPR2O15040 1411 aa24.43■■□□□ 1.5
CDR2-207ENST00000569045 ORAI2Q96SN7 254 aa24.42■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms