RNA–Protein interactions for RNA: ENST00000568900.5

SPNS1-212, Transcript of sphingolipid transporter 1 (putative), humanhuman

TSL 2

Gene SPNS1, Length 2,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS1-212ENST00000568900 PPLO60437 1756 aa28.99■■■□□ 2.23
SPNS1-212ENST00000568900 CENPBP07199 599 aaPredicted RBP28.99■■■□□ 2.23
SPNS1-212ENST00000568900 IQGAP1P46940 1657 aa28.97■■■□□ 2.23
SPNS1-212ENST00000568900 IDI1Q13907 227 aa28.96■■■□□ 2.23
SPNS1-212ENST00000568900 FBXO31Q5XUX0 539 aaPredicted RBP28.95■■■□□ 2.23
SPNS1-212ENST00000568900 SLC52A1Q9NWF4 448 aa28.95■■■□□ 2.22
SPNS1-212ENST00000568900 NRXN1Q9ULB1 1477 aa28.95■■■□□ 2.22
SPNS1-212ENST00000568900 ERVK-7P63135 1459 aa28.94■■■□□ 2.22
SPNS1-212ENST00000568900 CFAP70Q5T0N1 1121 aa28.92■■■□□ 2.22
SPNS1-212ENST00000568900 RPGRIP1LQ68CZ1 1315 aa28.92■■■□□ 2.22
SPNS1-212ENST00000568900 CCER2I3L3R5 266 aa28.92■■■□□ 2.22
SPNS1-212ENST00000568900 SCAF11Q99590 1463 aaKnown RBP28.9■■■□□ 2.22
SPNS1-212ENST00000568900 TESK2Q96S53 571 aa28.9■■■□□ 2.22
SPNS1-212ENST00000568900 MYO5BQ9ULV0 1848 aa28.9■■■□□ 2.22
SPNS1-212ENST00000568900 ESF1Q9H501 851 aaKnown RBP28.87■■■□□ 2.21
SPNS1-212ENST00000568900 NEXMIFQ5QGS0 1516 aa28.87■■■□□ 2.21
SPNS1-212ENST00000568900 DNAJC5Q9H3Z4 198 aa28.87■■■□□ 2.21
SPNS1-212ENST00000568900 TMEM131LA2VDJ0 1609 aa28.86■■■□□ 2.21
SPNS1-212ENST00000568900 PIK3C2GO75747 1445 aa28.86■■■□□ 2.21
SPNS1-212ENST00000568900 DISP3Q9P2K9 1392 aa28.84■■■□□ 2.21
SPNS1-212ENST00000568900 SPATA31D1Q6ZQQ2 1576 aa28.84■■■□□ 2.21
SPNS1-212ENST00000568900 NUTM2DQ5VT03 806 aaPredicted RBP28.83■■■□□ 2.21
SPNS1-212ENST00000568900 TMF1P82094 1093 aa28.81■■■□□ 2.2
SPNS1-212ENST00000568900 EIF3AQ14152 1382 aaKnown RBP28.81■■■□□ 2.2
SPNS1-212ENST00000568900 VGFO15240 615 aaPredicted RBP28.8■■■□□ 2.2
SPNS1-212ENST00000568900 PRKRIP1Q9H875 184 aaPredicted RBP28.8■■■□□ 2.2
SPNS1-212ENST00000568900 SETBP1Q9Y6X0 1596 aa28.79■■■□□ 2.2
SPNS1-212ENST00000568900 ZMYM3Q14202 1370 aa28.79■■■□□ 2.2
SPNS1-212ENST00000568900 C14orf93Q9H972 538 aaKnown RBP28.78■■■□□ 2.2
SPNS1-212ENST00000568900 STAG3Q9UJ98 1225 aa28.76■■■□□ 2.19
SPNS1-212ENST00000568900 ADGRB1O14514 1584 aa28.72■■■□□ 2.19
SPNS1-212ENST00000568900 ZFYVE9O95405 1425 aa28.72■■■□□ 2.19
SPNS1-212ENST00000568900 CNGB1Q14028 1251 aaPredicted RBP28.7■■■□□ 2.18
SPNS1-212ENST00000568900 TMEM132EQ6IEE7 984 aa28.7■■■□□ 2.18
SPNS1-212ENST00000568900 A2ML1A8K2U0 1454 aa28.67■■■□□ 2.18
SPNS1-212ENST00000568900 MYO3AQ8NEV4 1616 aa28.67■■■□□ 2.18
SPNS1-212ENST00000568900 SENP3Q9H4L4 574 aaPredicted RBP28.67■■■□□ 2.18
SPNS1-212ENST00000568900 TRAK1Q9UPV9 953 aa28.66■■■□□ 2.18
SPNS1-212ENST00000568900 CDCA8Q53HL2 280 aa28.63■■■□□ 2.17
SPNS1-212ENST00000568900 TNRQ92752 1358 aa28.63■■■□□ 2.17
SPNS1-212ENST00000568900 CCDC184Q52MB2 194 aa28.62■■■□□ 2.17
SPNS1-212ENST00000568900 CENPJQ9HC77 1338 aaPredicted RBP28.61■■■□□ 2.17
SPNS1-212ENST00000568900 KDM5AP29375 1690 aaKnown RBP28.6■■■□□ 2.17
SPNS1-212ENST00000568900 FER1L4A9Z1Z3 1794 aa28.59■■■□□ 2.17
SPNS1-212ENST00000568900 SLC24A1O60721 1099 aa28.59■■■□□ 2.17
SPNS1-212ENST00000568900 PANK3Q9H999 370 aa28.59■■■□□ 2.17
SPNS1-212ENST00000568900 RIMS2Q9UQ26 1411 aa28.59■■■□□ 2.17
SPNS1-212ENST00000568900 QRICH2Q9H0J4 1663 aa28.59■■■□□ 2.17
SPNS1-212ENST00000568900 MRS2Q9HD23 443 aa28.57■■■□□ 2.16
SPNS1-212ENST00000568900 ASXL1Q8IXJ9 1541 aa28.57■■■□□ 2.16
SPNS1-212ENST00000568900 SBNO2Q9Y2G9 1366 aa28.57■■■□□ 2.16
SPNS1-212ENST00000568900 ARHGEF28Q8N1W1 1705 aaKnown RBP28.56■■■□□ 2.16
SPNS1-212ENST00000568900 PER1O15534 1290 aaPredicted RBP28.55■■■□□ 2.16
SPNS1-212ENST00000568900 CEBPAP49715 358 aaPredicted RBP28.55■■■□□ 2.16
SPNS1-212ENST00000568900 C3P01024 1663 aa28.54■■■□□ 2.16
SPNS1-212ENST00000568900 MYOM1P52179 1685 aa28.54■■■□□ 2.16
SPNS1-212ENST00000568900 ALKQ9UM73 1620 aa28.53■■■□□ 2.16
SPNS1-212ENST00000568900 UBR1Q8IWV7 1749 aa28.51■■■□□ 2.15
SPNS1-212ENST00000568900 STK26Q9P289 416 aa28.5■■■□□ 2.15
SPNS1-212ENST00000568900 SCAF1Q9H7N4 1312 aaKnown RBP28.5■■■□□ 2.15
SPNS1-212ENST00000568900 KTN1Q86UP2 1357 aaKnown RBP28.49■■■□□ 2.15
SPNS1-212ENST00000568900 PLPPR3Q6T4P5 718 aa28.49■■■□□ 2.15
SPNS1-212ENST00000568900 RALBP1Q15311 655 aa28.48■■■□□ 2.15
SPNS1-212ENST00000568900 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.46■■■□□ 2.15
SPNS1-212ENST00000568900 YTHDC2Q9H6S0 1430 aaKnown RBP28.46■■■□□ 2.15
SPNS1-212ENST00000568900 NLRP1Q9C000 1473 aa28.45■■■□□ 2.15
SPNS1-212ENST00000568900 FAM9BQ8IZU0 186 aa28.45■■■□□ 2.14
SPNS1-212ENST00000568900 PARD3Q8TEW0 1356 aa28.44■■■□□ 2.14
SPNS1-212ENST00000568900 MYBBP1AQ9BQG0 1328 aaKnown RBP28.44■■■□□ 2.14
SPNS1-212ENST00000568900 CC2D1BQ5T0F9 858 aaKnown RBP28.43■■■□□ 2.14
SPNS1-212ENST00000568900 SETD1AO15047 1707 aaKnown RBP28.43■■■□□ 2.14
SPNS1-212ENST00000568900 PTPRMP28827 1452 aa28.42■■■□□ 2.14
SPNS1-212ENST00000568900 SAFB2Q14151 953 aaKnown RBP eCLIP28.41■■■□□ 2.14
SPNS1-212ENST00000568900 TMEM2Q9UHN6 1383 aa28.41■■■□□ 2.14
SPNS1-212ENST00000568900 NRXN3Q9Y4C0 1643 aa28.41■■■□□ 2.14
SPNS1-212ENST00000568900 HDGFP51858 240 aaKnown RBP28.41■■■□□ 2.14
SPNS1-212ENST00000568900 KNSTRNQ9Y448 316 aa28.4■■■□□ 2.14
SPNS1-212ENST00000568900 GTF3C3Q9Y5Q9 886 aa28.4■■■□□ 2.14
SPNS1-212ENST00000568900 HNRNPUQ00839 825 aaKnown RBP eCLIP28.39■■■□□ 2.14
SPNS1-212ENST00000568900 TULP4Q9NRJ4 1543 aa28.38■■■□□ 2.13
SPNS1-212ENST00000568900 TMC1Q8TDI8 760 aa28.38■■■□□ 2.13
SPNS1-212ENST00000568900 EVC2Q86UK5 1308 aa28.37■■■□□ 2.13
SPNS1-212ENST00000568900 PRAM1Q96QH2 718 aa28.36■■■□□ 2.13
SPNS1-212ENST00000568900 POGKQ9P215 609 aa28.35■■■□□ 2.13
SPNS1-212ENST00000568900 RIMS1Q86UR5 1692 aaKnown RBP28.35■■■□□ 2.13
SPNS1-212ENST00000568900 BRD4O60885 1362 aaPredicted RBP28.34■■■□□ 2.13
SPNS1-212ENST00000568900 BCANQ96GW7 911 aa28.33■■■□□ 2.13
SPNS1-212ENST00000568900 AMER1Q5JTC6 1135 aaPredicted RBP28.32■■■□□ 2.12
SPNS1-212ENST00000568900 NLRP13Q86W25 1043 aa28.32■■■□□ 2.12
SPNS1-212ENST00000568900 LRPPRCP42704 1394 aaKnown RBP28.32■■■□□ 2.12
SPNS1-212ENST00000568900 METP08581 1390 aa28.3■■■□□ 2.12
SPNS1-212ENST00000568900 MINK1Q8N4C8 1332 aaPredicted RBP28.3■■■□□ 2.12
SPNS1-212ENST00000568900 DLC1Q96QB1 1528 aa28.29■■■□□ 2.12
SPNS1-212ENST00000568900 LTKP29376 864 aa28.28■■■□□ 2.12
SPNS1-212ENST00000568900 PNISRQ8TF01 805 aaKnown RBP28.28■■■□□ 2.12
SPNS1-212ENST00000568900 PUS7Q96PZ0 661 aaKnown RBP28.28■■■□□ 2.12
SPNS1-212ENST00000568900 SLC12A5Q9H2X9 1139 aa28.28■■■□□ 2.12
SPNS1-212ENST00000568900 CABP2Q9NPB3 220 aa28.28■■■□□ 2.12
SPNS1-212ENST00000568900 CARD14Q9BXL6 1004 aa28.27■■■□□ 2.12
SPNS1-212ENST00000568900 TXNDC2Q86VQ3 553 aa28.26■■■□□ 2.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms