RNA–Protein interactions for RNA: ENST00000568896.1

SYNGR3-205, Transcript of synaptogyrin 3, humanhuman

TSL 5

Gene SYNGR3, Length 533 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-205ENST00000568896 PROSER2Q86WR7 435 aaPredicted RBP27.63■■■□□ 2.01
SYNGR3-205ENST00000568896 HFM1A2PYH4 1435 aa27.63■■■□□ 2.01
SYNGR3-205ENST00000568896 TET3O43151 1660 aa27.62■■■□□ 2.01
SYNGR3-205ENST00000568896 BCANQ96GW7 911 aa27.62■■■□□ 2.01
SYNGR3-205ENST00000568896 KDM5AP29375 1690 aaKnown RBP27.6■■■□□ 2.01
SYNGR3-205ENST00000568896 ADGRB3O60242 1522 aa27.59■■■□□ 2.01
SYNGR3-205ENST00000568896 FAM135BQ49AJ0 1406 aa27.58■■■□□ 2
SYNGR3-205ENST00000568896 IQGAP3Q86VI3 1631 aa27.57■■■□□ 2
SYNGR3-205ENST00000568896 RGS17Q9UGC6 210 aaPredicted RBP27.57■■■□□ 2
SYNGR3-205ENST00000568896 NUP155O75694 1391 aa27.54■■■□□ 2
SYNGR3-205ENST00000568896 RPRD2Q5VT52 1461 aaKnown RBP27.52■■■□□ 2
SYNGR3-205ENST00000568896 ZFYVE9O95405 1425 aa27.5■■□□□ 1.99
SYNGR3-205ENST00000568896 CHGAP10645 457 aaKnown RBP27.5■■□□□ 1.99
SYNGR3-205ENST00000568896 RIMS2Q9UQ26 1411 aa27.5■■□□□ 1.99
SYNGR3-205ENST00000568896 PPP1R15AO75807 674 aaPredicted RBP27.49■■□□□ 1.99
SYNGR3-205ENST00000568896 NUTM2DQ5VT03 806 aaPredicted RBP27.48■■□□□ 1.99
SYNGR3-205ENST00000568896 PLEKHG1Q9ULL1 1385 aa27.48■■□□□ 1.99
SYNGR3-205ENST00000568896 NWD1Q149M9 1564 aa27.46■■□□□ 1.99
SYNGR3-205ENST00000568896 E9PCH4 1651 aa27.46■■□□□ 1.99
SYNGR3-205ENST00000568896 NKTRP30414 1462 aaKnown RBP27.45■■□□□ 1.99
SYNGR3-205ENST00000568896 HDGFP51858 240 aaKnown RBP27.45■■□□□ 1.98
SYNGR3-205ENST00000568896 SLAIN2Q9P270 581 aa27.44■■□□□ 1.98
SYNGR3-205ENST00000568896 MSH6P52701 1360 aa27.44■■□□□ 1.98
SYNGR3-205ENST00000568896 ROBO1Q9Y6N7 1651 aa27.43■■□□□ 1.98
SYNGR3-205ENST00000568896 TMEM131LA2VDJ0 1609 aa27.43■■□□□ 1.98
SYNGR3-205ENST00000568896 MYO5BQ9ULV0 1848 aa27.42■■□□□ 1.98
SYNGR3-205ENST00000568896 TBX22Q9Y458 520 aa27.42■■□□□ 1.98
SYNGR3-205ENST00000568896 POTEAQ6S8J7 498 aa27.39■■□□□ 1.98
SYNGR3-205ENST00000568896 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.39■■□□□ 1.98
SYNGR3-205ENST00000568896 TRIM52Q96A61 297 aa27.38■■□□□ 1.97
SYNGR3-205ENST00000568896 SETD5Q9C0A6 1442 aa27.37■■□□□ 1.97
SYNGR3-205ENST00000568896 ADAMTS13Q76LX8 1427 aa27.35■■□□□ 1.97
SYNGR3-205ENST00000568896 CHD2O14647 1828 aaKnown RBP27.34■■□□□ 1.97
SYNGR3-205ENST00000568896 C14orf37Q86TY3 774 aa27.33■■□□□ 1.97
SYNGR3-205ENST00000568896 RAB3GAP2Q9H2M9 1393 aa27.29■■□□□ 1.96
SYNGR3-205ENST00000568896 SLC4A1APQ9BWU0 796 aaKnown RBP27.28■■□□□ 1.96
SYNGR3-205ENST00000568896 SPHKAPQ2M3C7 1700 aa27.27■■□□□ 1.96
SYNGR3-205ENST00000568896 JCADQ9P266 1359 aa27.27■■□□□ 1.96
SYNGR3-205ENST00000568896 AMOTL2Q9Y2J4 779 aa27.27■■□□□ 1.96
SYNGR3-205ENST00000568896 NCOA3Q9Y6Q9 1424 aa27.26■■□□□ 1.95
SYNGR3-205ENST00000568896 C19orf44Q9H6X5 657 aa27.26■■□□□ 1.95
SYNGR3-205ENST00000568896 PHLPP1O60346 1717 aa27.26■■□□□ 1.95
SYNGR3-205ENST00000568896 PTPRUQ92729 1446 aa27.24■■□□□ 1.95
SYNGR3-205ENST00000568896 PIK3R4Q99570 1358 aa27.24■■□□□ 1.95
SYNGR3-205ENST00000568896 ACIN1Q9UKV3 1341 aaKnown RBP27.23■■□□□ 1.95
SYNGR3-205ENST00000568896 ATF3P18847 181 aa27.23■■□□□ 1.95
SYNGR3-205ENST00000568896 CADPS2Q86UW7 1296 aa27.23■■□□□ 1.95
SYNGR3-205ENST00000568896 TRPM2O94759 1503 aa27.22■■□□□ 1.95
SYNGR3-205ENST00000568896 DIP2AQ14689 1571 aa27.2■■□□□ 1.94
SYNGR3-205ENST00000568896 COL16A1Q07092 1604 aaPredicted RBP27.19■■□□□ 1.94
SYNGR3-205ENST00000568896 ZNF326Q5BKZ1 582 aaKnown RBP27.18■■□□□ 1.94
SYNGR3-205ENST00000568896 MPHOSPH9Q99550 1183 aa27.18■■□□□ 1.94
SYNGR3-205ENST00000568896 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.18■■□□□ 1.94
SYNGR3-205ENST00000568896 CLTCL1P53675 1640 aa27.16■■□□□ 1.94
SYNGR3-205ENST00000568896 FOXD1Q16676 465 aa27.14■■□□□ 1.94
SYNGR3-205ENST00000568896 BRINP3Q76B58 766 aa27.14■■□□□ 1.94
SYNGR3-205ENST00000568896 LRP6O75581 1613 aa27.14■■□□□ 1.94
SYNGR3-205ENST00000568896 HRCP23327 699 aa27.12■■□□□ 1.93
SYNGR3-205ENST00000568896 SPATA31A6Q5VVP1 1343 aa27.12■■□□□ 1.93
SYNGR3-205ENST00000568896 METP08581 1390 aa27.11■■□□□ 1.93
SYNGR3-205ENST00000568896 MEX3CQ5U5Q3 659 aaKnown RBP27.11■■□□□ 1.93
SYNGR3-205ENST00000568896 NRXN3Q9Y4C0 1643 aa27.11■■□□□ 1.93
SYNGR3-205ENST00000568896 AHDC1Q5TGY3 1603 aaPredicted RBP27.1■■□□□ 1.93
SYNGR3-205ENST00000568896 SETBP1Q9Y6X0 1596 aa27.08■■□□□ 1.93
SYNGR3-205ENST00000568896 NUTM2BA6NNL0 878 aaPredicted RBP27.06■■□□□ 1.92
SYNGR3-205ENST00000568896 NUTM2EB1AL46 878 aaPredicted RBP27.06■■□□□ 1.92
SYNGR3-205ENST00000568896 NUTM2AQ8IVF1 878 aaPredicted RBP27.06■■□□□ 1.92
SYNGR3-205ENST00000568896 XRN1Q8IZH2 1706 aaKnown RBP27.04■■□□□ 1.92
SYNGR3-205ENST00000568896 SETD1AO15047 1707 aaKnown RBP27.04■■□□□ 1.92
SYNGR3-205ENST00000568896 MST1RQ04912 1400 aa27.03■■□□□ 1.92
SYNGR3-205ENST00000568896 ZNF772Q68DY9 489 aaPredicted RBP27.03■■□□□ 1.92
SYNGR3-205ENST00000568896 KIF1BO60333 1816 aa27.02■■□□□ 1.92
SYNGR3-205ENST00000568896 CCDC144AA2RUR9 1427 aa27.02■■□□□ 1.92
SYNGR3-205ENST00000568896 DCCP43146 1447 aa27.02■■□□□ 1.92
SYNGR3-205ENST00000568896 DDX17Q92841 729 aaKnown RBP27.02■■□□□ 1.92
SYNGR3-205ENST00000568896 TRIM26Q12899 539 aaPredicted RBP27.01■■□□□ 1.91
SYNGR3-205ENST00000568896 ASXL1Q8IXJ9 1541 aa27■■□□□ 1.91
SYNGR3-205ENST00000568896 NEXMIFQ5QGS0 1516 aa27■■□□□ 1.91
SYNGR3-205ENST00000568896 SHPRHQ149N8 1683 aa26.99■■□□□ 1.91
SYNGR3-205ENST00000568896 ADGRL3Q9HAR2 1447 aa26.95■■□□□ 1.9
SYNGR3-205ENST00000568896 LRRC59Q96AG4 307 aaKnown RBP26.94■■□□□ 1.9
SYNGR3-205ENST00000568896 RXRBP28702 533 aa26.93■■□□□ 1.9
SYNGR3-205ENST00000568896 AFF2P51816 1311 aa26.91■■□□□ 1.9
SYNGR3-205ENST00000568896 SPATA31E1Q6ZUB1 1445 aa26.91■■□□□ 1.9
SYNGR3-205ENST00000568896 VGFO15240 615 aaPredicted RBP26.91■■□□□ 1.9
SYNGR3-205ENST00000568896 UPF1Q92900 1129 aaKnown RBP eCLIP26.91■■□□□ 1.9
SYNGR3-205ENST00000568896 ANKRD30BQ9BXX2 1392 aa26.91■■□□□ 1.9
SYNGR3-205ENST00000568896 ROBO2Q9HCK4 1378 aa26.89■■□□□ 1.9
SYNGR3-205ENST00000568896 NHSL1Q5SYE7 1610 aa26.89■■□□□ 1.9
SYNGR3-205ENST00000568896 NALCNQ8IZF0 1738 aa26.87■■□□□ 1.89
SYNGR3-205ENST00000568896 RPGRIP1LQ68CZ1 1315 aa26.87■■□□□ 1.89
SYNGR3-205ENST00000568896 C1orf167Q5SNV9 1468 aa26.87■■□□□ 1.89
SYNGR3-205ENST00000568896 PNPLA6Q8IY17 1366 aa26.86■■□□□ 1.89
SYNGR3-205ENST00000568896 C8orf37Q96NL8 207 aa26.86■■□□□ 1.89
SYNGR3-205ENST00000568896 ORAI2Q96SN7 254 aa26.86■■□□□ 1.89
SYNGR3-205ENST00000568896 PPLO60437 1756 aa26.84■■□□□ 1.89
SYNGR3-205ENST00000568896 RGL3Q3MIN7 710 aa26.83■■□□□ 1.89
SYNGR3-205ENST00000568896 PTCH1Q13635 1447 aa26.82■■□□□ 1.88
SYNGR3-205ENST00000568896 ADAMTS2O95450 1211 aa26.81■■□□□ 1.88
SYNGR3-205ENST00000568896 QTRT2Q9H974 415 aaKnown RBP26.81■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms