RNA–Protein interactions for RNA: ENST00000568673.5

TCF4-240, Transcript of transcription factor 4, humanhuman

TSL 5 BASIC

Gene TCF4, Length 2,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-240ENST00000568673 SENP3-EIF4A1A0A087X0R7 540 aa12.94□□□□□ -0.34
TCF4-240ENST00000568673 EIF3AQ14152 1382 aaKnown RBP12.94□□□□□ -0.34
TCF4-240ENST00000568673 MLH3Q9UHC1 1453 aa12.94□□□□□ -0.34
TCF4-240ENST00000568673 CFAP74Q9C0B2 1584 aa12.94□□□□□ -0.34
TCF4-240ENST00000568673 POGZQ7Z3K3 1410 aa12.94□□□□□ -0.34
TCF4-240ENST00000568673 MYOM2P54296 1465 aa12.93□□□□□ -0.34
TCF4-240ENST00000568673 B4GALNT3Q6L9W6 998 aa12.93□□□□□ -0.34
TCF4-240ENST00000568673 KNSTRNQ9Y448 316 aa12.93□□□□□ -0.34
TCF4-240ENST00000568673 PDE3BQ13370 1112 aa12.93□□□□□ -0.34
TCF4-240ENST00000568673 ZMYM4Q5VZL5 1548 aa12.93□□□□□ -0.34
TCF4-240ENST00000568673 UGGT1Q9NYU2 1555 aa12.92□□□□□ -0.34
TCF4-240ENST00000568673 KIF1BO60333 1816 aa12.92□□□□□ -0.34
TCF4-240ENST00000568673 MAP3K4Q9Y6R4 1608 aa12.92□□□□□ -0.34
TCF4-240ENST00000568673 MYT1Q01538 1121 aa12.92□□□□□ -0.34
TCF4-240ENST00000568673 PPRC1Q5VV67 1664 aaKnown RBP12.92□□□□□ -0.34
TCF4-240ENST00000568673 CFAP70Q5T0N1 1121 aa12.92□□□□□ -0.34
TCF4-240ENST00000568673 ADGRF5Q8IZF2 1346 aa12.91□□□□□ -0.34
TCF4-240ENST00000568673 SYNMO15061 1565 aa12.91□□□□□ -0.34
TCF4-240ENST00000568673 AMER1Q5JTC6 1135 aaPredicted RBP12.9□□□□□ -0.34
TCF4-240ENST00000568673 BLMP54132 1417 aaPredicted RBP12.89□□□□□ -0.35
TCF4-240ENST00000568673 NRXN1Q9ULB1 1477 aa12.89□□□□□ -0.35
TCF4-240ENST00000568673 FRMPD1Q5SYB0 1578 aa12.89□□□□□ -0.35
TCF4-240ENST00000568673 HECW2Q9P2P5 1572 aa12.89□□□□□ -0.35
TCF4-240ENST00000568673 GGT6Q6P531 493 aa12.88□□□□□ -0.35
TCF4-240ENST00000568673 IFT172Q9UG01 1749 aa12.88□□□□□ -0.35
TCF4-240ENST00000568673 ABCA6Q8N139 1617 aa12.88□□□□□ -0.35
TCF4-240ENST00000568673 SALL2Q9Y467 1007 aaPredicted RBP12.88□□□□□ -0.35
TCF4-240ENST00000568673 NPATQ14207 1427 aa12.88□□□□□ -0.35
TCF4-240ENST00000568673 PPP2R1AP30153 589 aa12.87□□□□□ -0.35
TCF4-240ENST00000568673 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
TCF4-240ENST00000568673 NEO1Q92859 1461 aa12.87□□□□□ -0.35
TCF4-240ENST00000568673 ADGRB3O60242 1522 aa12.87□□□□□ -0.35
TCF4-240ENST00000568673 MROH2AA6NES4 1674 aa12.86□□□□□ -0.35
TCF4-240ENST00000568673 ASXL1Q8IXJ9 1541 aa12.86□□□□□ -0.35
TCF4-240ENST00000568673 RCAN3Q9UKA8 241 aa12.86□□□□□ -0.35
TCF4-240ENST00000568673 KDM5AP29375 1690 aaKnown RBP12.85□□□□□ -0.35
TCF4-240ENST00000568673 MYOM1P52179 1685 aa12.85□□□□□ -0.35
TCF4-240ENST00000568673 NOS1P29475 1434 aa12.85□□□□□ -0.35
TCF4-240ENST00000568673 RRP1P56182 461 aaKnown RBP12.85□□□□□ -0.35
TCF4-240ENST00000568673 CCDC136Q96JN2 1154 aa12.85□□□□□ -0.35
TCF4-240ENST00000568673 ADAMTS8Q9UP79 889 aa12.85□□□□□ -0.35
TCF4-240ENST00000568673 ERVK-7P63135 1459 aa12.84□□□□□ -0.35
TCF4-240ENST00000568673 SBNO2Q9Y2G9 1366 aa12.84□□□□□ -0.35
TCF4-240ENST00000568673 RAPGEF3O95398 923 aa12.84□□□□□ -0.35
TCF4-240ENST00000568673 CHGAP10645 457 aaKnown RBP12.84□□□□□ -0.35
TCF4-240ENST00000568673 RPGRIP1LQ68CZ1 1315 aa12.84□□□□□ -0.35
TCF4-240ENST00000568673 SETBP1Q9Y6X0 1596 aa12.83□□□□□ -0.36
TCF4-240ENST00000568673 CDCA7LQ96GN5 454 aa12.83□□□□□ -0.36
TCF4-240ENST00000568673 C14orf93Q9H972 538 aaKnown RBP12.83□□□□□ -0.36
TCF4-240ENST00000568673 ABCC3O15438 1527 aa12.83□□□□□ -0.36
TCF4-240ENST00000568673 PIK3C2GO75747 1445 aa12.82□□□□□ -0.36
TCF4-240ENST00000568673 CFAP65Q6ZU64 1925 aaKnown RBP12.82□□□□□ -0.36
TCF4-240ENST00000568673 MYO3AQ8NEV4 1616 aa12.82□□□□□ -0.36
TCF4-240ENST00000568673 FANCIQ9NVI1 1328 aa12.82□□□□□ -0.36
TCF4-240ENST00000568673 WDR43Q15061 677 aaKnown RBP eCLIP12.81□□□□□ -0.36
TCF4-240ENST00000568673 CENPJQ9HC77 1338 aaPredicted RBP12.81□□□□□ -0.36
TCF4-240ENST00000568673 PPLO60437 1756 aa12.81□□□□□ -0.36
TCF4-240ENST00000568673 ANP32EQ9BTT0 268 aa12.8□□□□□ -0.36
TCF4-240ENST00000568673 CARD14Q9BXL6 1004 aa12.79□□□□□ -0.36
TCF4-240ENST00000568673 CAMSAP1Q5T5Y3 1602 aa12.79□□□□□ -0.36
TCF4-240ENST00000568673 DIP2CQ9Y2E4 1556 aa12.79□□□□□ -0.36
TCF4-240ENST00000568673 TRAK1Q9UPV9 953 aa12.78□□□□□ -0.36
TCF4-240ENST00000568673 ADGRB1O14514 1584 aa12.78□□□□□ -0.36
TCF4-240ENST00000568673 ARHGAP31Q2M1Z3 1444 aa12.78□□□□□ -0.36
TCF4-240ENST00000568673 VGFO15240 615 aaPredicted RBP12.77□□□□□ -0.37
TCF4-240ENST00000568673 POTEDQ86YR6 584 aa12.77□□□□□ -0.37
TCF4-240ENST00000568673 EXOC6Q8TAG9 804 aa12.77□□□□□ -0.37
TCF4-240ENST00000568673 RICTORQ6R327 1708 aa12.76□□□□□ -0.37
TCF4-240ENST00000568673 SIGLEC1Q9BZZ2 1709 aa12.76□□□□□ -0.37
TCF4-240ENST00000568673 TMEM132EQ6IEE7 984 aa12.76□□□□□ -0.37
TCF4-240ENST00000568673 PIK3C2BO00750 1634 aa12.76□□□□□ -0.37
TCF4-240ENST00000568673 ZNF521Q96K83 1311 aa12.75□□□□□ -0.37
TCF4-240ENST00000568673 PLEKHH1Q9ULM0 1364 aa12.75□□□□□ -0.37
TCF4-240ENST00000568673 SLC52A1Q9NWF4 448 aa12.74□□□□□ -0.37
TCF4-240ENST00000568673 MSH5O43196 834 aa12.73□□□□□ -0.37
TCF4-240ENST00000568673 GOLGA2Q08379 1002 aa12.73□□□□□ -0.37
TCF4-240ENST00000568673 IDI1Q13907 227 aa12.73□□□□□ -0.37
TCF4-240ENST00000568673 YEATS2Q9ULM3 1422 aa12.73□□□□□ -0.37
TCF4-240ENST00000568673 GLI2P10070 1586 aa12.73□□□□□ -0.37
TCF4-240ENST00000568673 ZC3H13Q5T200 1668 aaKnown RBP12.73□□□□□ -0.37
TCF4-240ENST00000568673 DUSP27Q5VZP5 1158 aa12.73□□□□□ -0.37
TCF4-240ENST00000568673 CYB5RLQ6IPT4 315 aa12.73□□□□□ -0.37
TCF4-240ENST00000568673 PUS7Q96PZ0 661 aaKnown RBP12.73□□□□□ -0.37
TCF4-240ENST00000568673 QRICH2Q9H0J4 1663 aa12.73□□□□□ -0.37
TCF4-240ENST00000568673 NEXMIFQ5QGS0 1516 aa12.72□□□□□ -0.37
TCF4-240ENST00000568673 SLC12A5Q9H2X9 1139 aa12.72□□□□□ -0.37
TCF4-240ENST00000568673 ZFYVE9O95405 1425 aa12.71□□□□□ -0.37
TCF4-240ENST00000568673 NCBP3Q53F19 620 aaKnown RBP12.71□□□□□ -0.37
TCF4-240ENST00000568673 POLR3AO14802 1390 aaPredicted RBP12.71□□□□□ -0.37
TCF4-240ENST00000568673 PLIN1O60240 522 aa12.71□□□□□ -0.38
TCF4-240ENST00000568673 NUTM2DQ5VT03 806 aaPredicted RBP12.71□□□□□ -0.38
TCF4-240ENST00000568673 NSD3Q9BZ95 1437 aa12.7□□□□□ -0.38
TCF4-240ENST00000568673 SLFN5Q08AF3 891 aa12.7□□□□□ -0.38
TCF4-240ENST00000568673 NGEFQ8N5V2 710 aa12.7□□□□□ -0.38
TCF4-240ENST00000568673 CCDC146Q8IYE0 955 aa12.7□□□□□ -0.38
TCF4-240ENST00000568673 TRMT2AQ8IZ69 625 aaKnown RBP12.7□□□□□ -0.38
TCF4-240ENST00000568673 EVC2Q86UK5 1308 aa12.69□□□□□ -0.38
TCF4-240ENST00000568673 APAF1O14727 1248 aa12.69□□□□□ -0.38
TCF4-240ENST00000568673 MORC1Q86VD1 984 aa12.69□□□□□ -0.38
TCF4-240ENST00000568673 FAM69CQ0P6D2 419 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms