RNA–Protein interactions for RNA: ENST00000568359.1

SNX29-206, Transcript of sorting nexin 29, humanhuman

TSL 5

Gene SNX29, Length 601 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-206ENST00000568359 MAP3K1Q13233 1512 aa8.41□□□□□ -1.06
SNX29-206ENST00000568359 FAM135BQ49AJ0 1406 aa8.41□□□□□ -1.06
SNX29-206ENST00000568359 TMEM94Q12767 1356 aa8.41□□□□□ -1.06
SNX29-206ENST00000568359 VSIG10Q8N0Z9 540 aa8.41□□□□□ -1.06
SNX29-206ENST00000568359 RRP7BPQ9NSQ0 103 aa8.41□□□□□ -1.06
SNX29-206ENST00000568359 NKTRP30414 1462 aaKnown RBP8.4□□□□□ -1.06
SNX29-206ENST00000568359 MSH6P52701 1360 aa8.4□□□□□ -1.06
SNX29-206ENST00000568359 APLP2Q06481 763 aa8.4□□□□□ -1.06
SNX29-206ENST00000568359 PROSER2Q86WR7 435 aaPredicted RBP8.4□□□□□ -1.06
SNX29-206ENST00000568359 NWD1Q149M9 1564 aa8.39□□□□□ -1.07
SNX29-206ENST00000568359 DAPK1P53355 1430 aa8.39□□□□□ -1.07
SNX29-206ENST00000568359 SLC26A8Q96RN1 970 aa8.39□□□□□ -1.07
SNX29-206ENST00000568359 GCC2Q8IWJ2 1684 aa8.39□□□□□ -1.07
SNX29-206ENST00000568359 MYO5BQ9ULV0 1848 aa8.38□□□□□ -1.07
SNX29-206ENST00000568359 ANKRD30AQ9BXX3 1397 aa8.38□□□□□ -1.07
SNX29-206ENST00000568359 PPP1R15AO75807 674 aaPredicted RBP8.38□□□□□ -1.07
SNX29-206ENST00000568359 KCNA6P17658 529 aa8.38□□□□□ -1.07
SNX29-206ENST00000568359 KANK4Q5T7N3 995 aaPredicted RBP8.38□□□□□ -1.07
SNX29-206ENST00000568359 RGS17Q9UGC6 210 aaPredicted RBP8.38□□□□□ -1.07
SNX29-206ENST00000568359 LMTK2Q8IWU2 1503 aa8.38□□□□□ -1.07
SNX29-206ENST00000568359 ABCC5O15440 1437 aa8.37□□□□□ -1.07
SNX29-206ENST00000568359 C14orf37Q86TY3 774 aa8.37□□□□□ -1.07
SNX29-206ENST00000568359 RBM33Q96EV2 1170 aaKnown RBP8.37□□□□□ -1.07
SNX29-206ENST00000568359 TET3O43151 1660 aa8.37□□□□□ -1.07
SNX29-206ENST00000568359 MEX3CQ5U5Q3 659 aaKnown RBP8.36□□□□□ -1.07
SNX29-206ENST00000568359 POTEAQ6S8J7 498 aa8.36□□□□□ -1.07
SNX29-206ENST00000568359 CHIC2Q9UKJ5 165 aa8.36□□□□□ -1.07
SNX29-206ENST00000568359 FGD6Q6ZV73 1430 aa8.36□□□□□ -1.07
SNX29-206ENST00000568359 CHD2O14647 1828 aaKnown RBP8.36□□□□□ -1.07
SNX29-206ENST00000568359 JCADQ9P266 1359 aa8.35□□□□□ -1.07
SNX29-206ENST00000568359 IDI1Q13907 227 aa8.35□□□□□ -1.07
SNX29-206ENST00000568359 HOMEZQ8IX15 550 aa8.35□□□□□ -1.07
SNX29-206ENST00000568359 PIAS4Q8N2W9 510 aaPredicted RBP8.35□□□□□ -1.07
SNX29-206ENST00000568359 RPRD2Q5VT52 1461 aaKnown RBP8.34□□□□□ -1.07
SNX29-206ENST00000568359 COL16A1Q07092 1604 aaPredicted RBP8.34□□□□□ -1.07
SNX29-206ENST00000568359 NOS1P29475 1434 aa8.33□□□□□ -1.08
SNX29-206ENST00000568359 HDGFP51858 240 aaKnown RBP8.33□□□□□ -1.08
SNX29-206ENST00000568359 DIP2AQ14689 1571 aa8.33□□□□□ -1.08
SNX29-206ENST00000568359 SLC52A1Q9NWF4 448 aa8.33□□□□□ -1.08
SNX29-206ENST00000568359 SLAIN2Q9P270 581 aa8.33□□□□□ -1.08
SNX29-206ENST00000568359 KDM2AQ9Y2K7 1162 aa8.33□□□□□ -1.08
SNX29-206ENST00000568359 GTF3C3Q9Y5Q9 886 aa8.33□□□□□ -1.08
SNX29-206ENST00000568359 SHPRHQ149N8 1683 aa8.33□□□□□ -1.08
SNX29-206ENST00000568359 PLEKHG1Q9ULL1 1385 aa8.33□□□□□ -1.08
SNX29-206ENST00000568359 TMEM131LA2VDJ0 1609 aa8.32□□□□□ -1.08
SNX29-206ENST00000568359 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.32□□□□□ -1.08
SNX29-206ENST00000568359 RIMS2Q9UQ26 1411 aa8.32□□□□□ -1.08
SNX29-206ENST00000568359 CHGAP10645 457 aaKnown RBP8.32□□□□□ -1.08
SNX29-206ENST00000568359 ZFYVE9O95405 1425 aa8.31□□□□□ -1.08
SNX29-206ENST00000568359 LOC105371045A0A1W2PR82 267 aa8.31□□□□□ -1.08
SNX29-206ENST00000568359 ATF3P18847 181 aa8.31□□□□□ -1.08
SNX29-206ENST00000568359 FAM50AQ14320 339 aaKnown RBP8.31□□□□□ -1.08
SNX29-206ENST00000568359 AHDC1Q5TGY3 1603 aaPredicted RBP8.31□□□□□ -1.08
SNX29-206ENST00000568359 ADGRL2O95490 1459 aa8.31□□□□□ -1.08
SNX29-206ENST00000568359 SPATA31A6Q5VVP1 1343 aa8.3□□□□□ -1.08
SNX29-206ENST00000568359 ANKRD50Q9ULJ7 1429 aa8.3□□□□□ -1.08
SNX29-206ENST00000568359 TRPM2O94759 1503 aa8.3□□□□□ -1.08
SNX29-206ENST00000568359 LRP6O75581 1613 aa8.3□□□□□ -1.08
SNX29-206ENST00000568359 ZNF772Q68DY9 489 aaPredicted RBP8.3□□□□□ -1.08
SNX29-206ENST00000568359 TRIM52Q96A61 297 aa8.3□□□□□ -1.08
SNX29-206ENST00000568359 UNC13BO14795 1591 aa8.3□□□□□ -1.08
SNX29-206ENST00000568359 E9PCH4 1651 aa8.3□□□□□ -1.08
SNX29-206ENST00000568359 CADPS2Q86UW7 1296 aa8.29□□□□□ -1.08
SNX29-206ENST00000568359 ABCF1Q8NE71 845 aaKnown RBP eCLIP8.29□□□□□ -1.08
SNX29-206ENST00000568359 NCOA3Q9Y6Q9 1424 aa8.29□□□□□ -1.08
SNX29-206ENST00000568359 NUTM2BA6NNL0 878 aaPredicted RBP8.27□□□□□ -1.09
SNX29-206ENST00000568359 NUTM2EB1AL46 878 aaPredicted RBP8.27□□□□□ -1.09
SNX29-206ENST00000568359 NUTM2DQ5VT03 806 aaPredicted RBP8.27□□□□□ -1.09
SNX29-206ENST00000568359 NUTM2AQ8IVF1 878 aaPredicted RBP8.27□□□□□ -1.09
SNX29-206ENST00000568359 CNKSR2Q8WXI2 1034 aa8.27□□□□□ -1.09
SNX29-206ENST00000568359 IQGAP3Q86VI3 1631 aa8.27□□□□□ -1.09
SNX29-206ENST00000568359 PIK3R4Q99570 1358 aa8.26□□□□□ -1.09
SNX29-206ENST00000568359 ASXL1Q8IXJ9 1541 aa8.26□□□□□ -1.09
SNX29-206ENST00000568359 RXRBP28702 533 aa8.26□□□□□ -1.09
SNX29-206ENST00000568359 C19orf44Q9H6X5 657 aa8.26□□□□□ -1.09
SNX29-206ENST00000568359 TBX22Q9Y458 520 aa8.26□□□□□ -1.09
SNX29-206ENST00000568359 NHSL1Q5SYE7 1610 aa8.25□□□□□ -1.09
SNX29-206ENST00000568359 DCCP43146 1447 aa8.25□□□□□ -1.09
SNX29-206ENST00000568359 ADAMTS13Q76LX8 1427 aa8.25□□□□□ -1.09
SNX29-206ENST00000568359 SPHKAPQ2M3C7 1700 aa8.25□□□□□ -1.09
SNX29-206ENST00000568359 XRN1Q8IZH2 1706 aaKnown RBP8.25□□□□□ -1.09
SNX29-206ENST00000568359 UPF1Q92900 1129 aaKnown RBP eCLIP8.24□□□□□ -1.09
SNX29-206ENST00000568359 CDK12Q9NYV4 1490 aaPredicted RBP8.24□□□□□ -1.09
SNX29-206ENST00000568359 AFF2P51816 1311 aa8.24□□□□□ -1.09
SNX29-206ENST00000568359 BRINP3Q76B58 766 aa8.23□□□□□ -1.09
SNX29-206ENST00000568359 AMOTL2Q9Y2J4 779 aa8.23□□□□□ -1.09
SNX29-206ENST00000568359 NALCNQ8IZF0 1738 aa8.23□□□□□ -1.09
SNX29-206ENST00000568359 SETBP1Q9Y6X0 1596 aa8.22□□□□□ -1.09
SNX29-206ENST00000568359 NRXN3Q9Y4C0 1643 aa8.22□□□□□ -1.09
SNX29-206ENST00000568359 ZNF326Q5BKZ1 582 aaKnown RBP8.22□□□□□ -1.09
SNX29-206ENST00000568359 C8orf37Q96NL8 207 aa8.22□□□□□ -1.09
SNX29-206ENST00000568359 KIF1BO60333 1816 aa8.21□□□□□ -1.1
SNX29-206ENST00000568359 NUP155O75694 1391 aa8.21□□□□□ -1.1
SNX29-206ENST00000568359 MST1RQ04912 1400 aa8.2□□□□□ -1.1
SNX29-206ENST00000568359 PTPRUQ92729 1446 aa8.2□□□□□ -1.1
SNX29-206ENST00000568359 SETD5Q9C0A6 1442 aa8.2□□□□□ -1.1
SNX29-206ENST00000568359 ITGAEP38570 1179 aa8.2□□□□□ -1.1
SNX29-206ENST00000568359 LRRC59Q96AG4 307 aaKnown RBP8.2□□□□□ -1.1
SNX29-206ENST00000568359 ROCK1Q13464 1354 aa8.2□□□□□ -1.1
SNX29-206ENST00000568359 RGS12O14924 1447 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms