RNA–Protein interactions for RNA: ENST00000568228.5

CMC2-219, Transcript of C-X9-C motif containing 2, humanhuman

TSL 3

Gene CMC2, Length 825 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC2-219ENST00000568228 GCC2Q8IWJ2 1684 aa18.66■□□□□ 0.58
CMC2-219ENST00000568228 NOS1P29475 1434 aa18.66■□□□□ 0.58
CMC2-219ENST00000568228 MSH6P52701 1360 aa18.63■□□□□ 0.57
CMC2-219ENST00000568228 POTEAQ6S8J7 498 aa18.62■□□□□ 0.57
CMC2-219ENST00000568228 SETD1AO15047 1707 aaKnown RBP18.62■□□□□ 0.57
CMC2-219ENST00000568228 CHD2O14647 1828 aaKnown RBP18.62■□□□□ 0.57
CMC2-219ENST00000568228 ADGRL2O95490 1459 aa18.6■□□□□ 0.57
CMC2-219ENST00000568228 SLC52A1Q9NWF4 448 aa18.6■□□□□ 0.57
CMC2-219ENST00000568228 RPRD2Q5VT52 1461 aaKnown RBP18.59■□□□□ 0.57
CMC2-219ENST00000568228 PPP1R15AO75807 674 aaPredicted RBP18.59■□□□□ 0.57
CMC2-219ENST00000568228 ZFYVE9O95405 1425 aa18.57■□□□□ 0.56
CMC2-219ENST00000568228 TMEM131LA2VDJ0 1609 aa18.57■□□□□ 0.56
CMC2-219ENST00000568228 PLEKHG1Q9ULL1 1385 aa18.56■□□□□ 0.56
CMC2-219ENST00000568228 FAM50AQ14320 339 aaKnown RBP18.56■□□□□ 0.56
CMC2-219ENST00000568228 SLAIN2Q9P270 581 aa18.56■□□□□ 0.56
CMC2-219ENST00000568228 ANKRD50Q9ULJ7 1429 aa18.56■□□□□ 0.56
CMC2-219ENST00000568228 RIMS2Q9UQ26 1411 aa18.56■□□□□ 0.56
CMC2-219ENST00000568228 JCADQ9P266 1359 aa18.55■□□□□ 0.56
CMC2-219ENST00000568228 COL16A1Q07092 1604 aaPredicted RBP18.55■□□□□ 0.56
CMC2-219ENST00000568228 C14orf37Q86TY3 774 aa18.53■□□□□ 0.56
CMC2-219ENST00000568228 UNC13BO14795 1591 aa18.52■□□□□ 0.56
CMC2-219ENST00000568228 CHGAP10645 457 aaKnown RBP18.52■□□□□ 0.56
CMC2-219ENST00000568228 HDGFP51858 240 aaKnown RBP18.52■□□□□ 0.56
CMC2-219ENST00000568228 E9PCH4 1651 aa18.51■□□□□ 0.55
CMC2-219ENST00000568228 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.51■□□□□ 0.55
CMC2-219ENST00000568228 DIP2AQ14689 1571 aa18.5■□□□□ 0.55
CMC2-219ENST00000568228 NUTM2DQ5VT03 806 aaPredicted RBP18.48■□□□□ 0.55
CMC2-219ENST00000568228 LRP6O75581 1613 aa18.48■□□□□ 0.55
CMC2-219ENST00000568228 SHPRHQ149N8 1683 aa18.47■□□□□ 0.55
CMC2-219ENST00000568228 MEX3CQ5U5Q3 659 aaKnown RBP18.47■□□□□ 0.55
CMC2-219ENST00000568228 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
CMC2-219ENST00000568228 TBX22Q9Y458 520 aa18.47■□□□□ 0.55
CMC2-219ENST00000568228 NCOA3Q9Y6Q9 1424 aa18.47■□□□□ 0.55
CMC2-219ENST00000568228 AHDC1Q5TGY3 1603 aaPredicted RBP18.46■□□□□ 0.55
CMC2-219ENST00000568228 IQGAP3Q86VI3 1631 aa18.45■□□□□ 0.54
CMC2-219ENST00000568228 ADAMTS13Q76LX8 1427 aa18.45■□□□□ 0.54
CMC2-219ENST00000568228 SPATA31A6Q5VVP1 1343 aa18.45■□□□□ 0.54
CMC2-219ENST00000568228 TRPM2O94759 1503 aa18.44■□□□□ 0.54
CMC2-219ENST00000568228 ATF3P18847 181 aa18.44■□□□□ 0.54
CMC2-219ENST00000568228 CADPS2Q86UW7 1296 aa18.43■□□□□ 0.54
CMC2-219ENST00000568228 C19orf44Q9H6X5 657 aa18.42■□□□□ 0.54
CMC2-219ENST00000568228 PIK3R4Q99570 1358 aa18.42■□□□□ 0.54
CMC2-219ENST00000568228 ZNF772Q68DY9 489 aaPredicted RBP18.4■□□□□ 0.54
CMC2-219ENST00000568228 TRIM52Q96A61 297 aa18.4■□□□□ 0.54
CMC2-219ENST00000568228 AMOTL2Q9Y2J4 779 aa18.38■□□□□ 0.53
CMC2-219ENST00000568228 XRN1Q8IZH2 1706 aaKnown RBP18.37■□□□□ 0.53
CMC2-219ENST00000568228 PTPRUQ92729 1446 aa18.37■□□□□ 0.53
CMC2-219ENST00000568228 NRXN3Q9Y4C0 1643 aa18.37■□□□□ 0.53
CMC2-219ENST00000568228 SPHKAPQ2M3C7 1700 aa18.37■□□□□ 0.53
CMC2-219ENST00000568228 NUTM2BA6NNL0 878 aaPredicted RBP18.36■□□□□ 0.53
CMC2-219ENST00000568228 NUTM2EB1AL46 878 aaPredicted RBP18.36■□□□□ 0.53
CMC2-219ENST00000568228 ROCK1Q13464 1354 aa18.36■□□□□ 0.53
CMC2-219ENST00000568228 BRINP3Q76B58 766 aa18.36■□□□□ 0.53
CMC2-219ENST00000568228 NUTM2AQ8IVF1 878 aaPredicted RBP18.36■□□□□ 0.53
CMC2-219ENST00000568228 ASXL1Q8IXJ9 1541 aa18.36■□□□□ 0.53
CMC2-219ENST00000568228 NHSL1Q5SYE7 1610 aa18.35■□□□□ 0.53
CMC2-219ENST00000568228 NUP155O75694 1391 aa18.35■□□□□ 0.53
CMC2-219ENST00000568228 DCCP43146 1447 aa18.34■□□□□ 0.53
CMC2-219ENST00000568228 SETBP1Q9Y6X0 1596 aa18.34■□□□□ 0.53
CMC2-219ENST00000568228 ITGAEP38570 1179 aa18.33■□□□□ 0.52
CMC2-219ENST00000568228 UPF1Q92900 1129 aaKnown RBP eCLIP18.33■□□□□ 0.52
CMC2-219ENST00000568228 RXRBP28702 533 aa18.32■□□□□ 0.52
CMC2-219ENST00000568228 MST1RQ04912 1400 aa18.31■□□□□ 0.52
CMC2-219ENST00000568228 NALCNQ8IZF0 1738 aa18.3■□□□□ 0.52
CMC2-219ENST00000568228 ZNF326Q5BKZ1 582 aaKnown RBP18.3■□□□□ 0.52
CMC2-219ENST00000568228 AFF2P51816 1311 aa18.29■□□□□ 0.52
CMC2-219ENST00000568228 SETD5Q9C0A6 1442 aa18.28■□□□□ 0.52
CMC2-219ENST00000568228 CDK12Q9NYV4 1490 aaPredicted RBP18.27■□□□□ 0.52
CMC2-219ENST00000568228 METP08581 1390 aa18.27■□□□□ 0.51
CMC2-219ENST00000568228 CLTCL1P53675 1640 aa18.26■□□□□ 0.51
CMC2-219ENST00000568228 KIF1BO60333 1816 aa18.26■□□□□ 0.51
CMC2-219ENST00000568228 ADGRL3Q9HAR2 1447 aa18.25■□□□□ 0.51
CMC2-219ENST00000568228 LRRC59Q96AG4 307 aaKnown RBP18.25■□□□□ 0.51
CMC2-219ENST00000568228 C8orf37Q96NL8 207 aa18.25■□□□□ 0.51
CMC2-219ENST00000568228 NEXMIFQ5QGS0 1516 aa18.24■□□□□ 0.51
CMC2-219ENST00000568228 DDX17Q92841 729 aaKnown RBP18.24■□□□□ 0.51
CMC2-219ENST00000568228 RGS12O14924 1447 aa18.23■□□□□ 0.51
CMC2-219ENST00000568228 PNPLA6Q8IY17 1366 aa18.22■□□□□ 0.51
CMC2-219ENST00000568228 QTRT2Q9H974 415 aaKnown RBP18.19■□□□□ 0.5
CMC2-219ENST00000568228 PPARGC1BQ86YN6 1023 aaKnown RBP18.18■□□□□ 0.5
CMC2-219ENST00000568228 ADAMTS2O95450 1211 aa18.17■□□□□ 0.5
CMC2-219ENST00000568228 RBM6P78332 1123 aaKnown RBP18.17■□□□□ 0.5
CMC2-219ENST00000568228 C1orf167Q5SNV9 1468 aa18.17■□□□□ 0.5
CMC2-219ENST00000568228 LAMC1P11047 1609 aa18.16■□□□□ 0.5
CMC2-219ENST00000568228 NGLY1Q96IV0 654 aa18.16■□□□□ 0.5
CMC2-219ENST00000568228 PTCH1Q13635 1447 aa18.15■□□□□ 0.5
CMC2-219ENST00000568228 ORAI2Q96SN7 254 aa18.11■□□□□ 0.49
CMC2-219ENST00000568228 ROBO2Q9HCK4 1378 aa18.11■□□□□ 0.49
CMC2-219ENST00000568228 PPLO60437 1756 aa18.1■□□□□ 0.49
CMC2-219ENST00000568228 COL22A1Q8NFW1 1626 aaPredicted RBP18.1■□□□□ 0.49
CMC2-219ENST00000568228 USP21Q9UK80 565 aa18.1■□□□□ 0.49
CMC2-219ENST00000568228 ATAD2Q6PL18 1390 aa18.09■□□□□ 0.49
CMC2-219ENST00000568228 VGFO15240 615 aaPredicted RBP18.09■□□□□ 0.49
CMC2-219ENST00000568228 SOS2Q07890 1332 aaPredicted RBP18.08■□□□□ 0.49
CMC2-219ENST00000568228 SRCAPQ6ZRS2 3230 aa18.08■□□□□ 0.48
CMC2-219ENST00000568228 MARF1Q9Y4F3 1742 aaKnown RBP18.08■□□□□ 0.48
CMC2-219ENST00000568228 NAIPQ13075 1403 aa18.07■□□□□ 0.48
CMC2-219ENST00000568228 HFM1A2PYH4 1435 aa18.06■□□□□ 0.48
CMC2-219ENST00000568228 TRPC5Q9UL62 973 aaPredicted RBP18.06■□□□□ 0.48
CMC2-219ENST00000568228 CDC42BPGQ6DT37 1551 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 324.9 ms