RNA–Protein interactions for RNA: ENST00000568108.1

PTPN9-205, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

TSL 2

Gene PTPN9, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-205ENST00000568108 SLC52A1Q9NWF4 448 aa9.84□□□□□ -0.83
PTPN9-205ENST00000568108 LMTK2Q8IWU2 1503 aa9.82□□□□□ -0.84
PTPN9-205ENST00000568108 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
PTPN9-205ENST00000568108 HDGFP51858 240 aaKnown RBP9.82□□□□□ -0.84
PTPN9-205ENST00000568108 FAM50AQ14320 339 aaKnown RBP9.82□□□□□ -0.84
PTPN9-205ENST00000568108 CROCC2H7BZ55 1655 aa9.82□□□□□ -0.84
PTPN9-205ENST00000568108 NOS1P29475 1434 aa9.82□□□□□ -0.84
PTPN9-205ENST00000568108 TET3O43151 1660 aa9.81□□□□□ -0.84
PTPN9-205ENST00000568108 POTEAQ6S8J7 498 aa9.81□□□□□ -0.84
PTPN9-205ENST00000568108 SLAIN2Q9P270 581 aa9.81□□□□□ -0.84
PTPN9-205ENST00000568108 PPP1R15AO75807 674 aaPredicted RBP9.8□□□□□ -0.84
PTPN9-205ENST00000568108 KDM5AP29375 1690 aaKnown RBP9.8□□□□□ -0.84
PTPN9-205ENST00000568108 MSH6P52701 1360 aa9.79□□□□□ -0.84
PTPN9-205ENST00000568108 ADGRB3O60242 1522 aa9.78□□□□□ -0.84
PTPN9-205ENST00000568108 CHGAP10645 457 aaKnown RBP9.78□□□□□ -0.84
PTPN9-205ENST00000568108 ANKRD50Q9ULJ7 1429 aa9.78□□□□□ -0.84
PTPN9-205ENST00000568108 ROBO1Q9Y6N7 1651 aa9.77□□□□□ -0.84
PTPN9-205ENST00000568108 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.77□□□□□ -0.85
PTPN9-205ENST00000568108 FOXD4L1Q9NU39 408 aa9.77□□□□□ -0.85
PTPN9-205ENST00000568108 TBX22Q9Y458 520 aa9.77□□□□□ -0.85
PTPN9-205ENST00000568108 ADGRL2O95490 1459 aa9.77□□□□□ -0.85
PTPN9-205ENST00000568108 NKTRP30414 1462 aaKnown RBP9.77□□□□□ -0.85
PTPN9-205ENST00000568108 RPRD2Q5VT52 1461 aaKnown RBP9.77□□□□□ -0.85
PTPN9-205ENST00000568108 PLEKHG1Q9ULL1 1385 aa9.76□□□□□ -0.85
PTPN9-205ENST00000568108 ZFYVE9O95405 1425 aa9.76□□□□□ -0.85
PTPN9-205ENST00000568108 RIMS2Q9UQ26 1411 aa9.76□□□□□ -0.85
PTPN9-205ENST00000568108 NUTM2DQ5VT03 806 aaPredicted RBP9.76□□□□□ -0.85
PTPN9-205ENST00000568108 C14orf37Q86TY3 774 aa9.76□□□□□ -0.85
PTPN9-205ENST00000568108 JCADQ9P266 1359 aa9.75□□□□□ -0.85
PTPN9-205ENST00000568108 NWD1Q149M9 1564 aa9.75□□□□□ -0.85
PTPN9-205ENST00000568108 ATF3P18847 181 aa9.73□□□□□ -0.85
PTPN9-205ENST00000568108 CADPS2Q86UW7 1296 aa9.73□□□□□ -0.85
PTPN9-205ENST00000568108 C19orf44Q9H6X5 657 aa9.73□□□□□ -0.85
PTPN9-205ENST00000568108 NCOA3Q9Y6Q9 1424 aa9.73□□□□□ -0.85
PTPN9-205ENST00000568108 CHD2O14647 1828 aaKnown RBP9.72□□□□□ -0.85
PTPN9-205ENST00000568108 TMEM131LA2VDJ0 1609 aa9.72□□□□□ -0.85
PTPN9-205ENST00000568108 RNF216Q9NWF9 866 aaPredicted RBP9.72□□□□□ -0.85
PTPN9-205ENST00000568108 PHLPP1O60346 1717 aa9.71□□□□□ -0.85
PTPN9-205ENST00000568108 MEX3CQ5U5Q3 659 aaKnown RBP9.71□□□□□ -0.86
PTPN9-205ENST00000568108 AMOTL2Q9Y2J4 779 aa9.71□□□□□ -0.86
PTPN9-205ENST00000568108 SPATA31A6Q5VVP1 1343 aa9.71□□□□□ -0.86
PTPN9-205ENST00000568108 PIK3R4Q99570 1358 aa9.71□□□□□ -0.86
PTPN9-205ENST00000568108 ADAMTS13Q76LX8 1427 aa9.71□□□□□ -0.86
PTPN9-205ENST00000568108 MYO5BQ9ULV0 1848 aa9.7□□□□□ -0.86
PTPN9-205ENST00000568108 ZNF772Q68DY9 489 aaPredicted RBP9.7□□□□□ -0.86
PTPN9-205ENST00000568108 NUP155O75694 1391 aa9.7□□□□□ -0.86
PTPN9-205ENST00000568108 GCC2Q8IWJ2 1684 aa9.7□□□□□ -0.86
PTPN9-205ENST00000568108 ITGAEP38570 1179 aa9.69□□□□□ -0.86
PTPN9-205ENST00000568108 MAPK8IP2Q13387 824 aaPredicted RBP9.69□□□□□ -0.86
PTPN9-205ENST00000568108 ROCK1Q13464 1354 aa9.69□□□□□ -0.86
PTPN9-205ENST00000568108 BRINP3Q76B58 766 aa9.68□□□□□ -0.86
PTPN9-205ENST00000568108 TRIM52Q96A61 297 aa9.68□□□□□ -0.86
PTPN9-205ENST00000568108 COL16A1Q07092 1604 aaPredicted RBP9.67□□□□□ -0.86
PTPN9-205ENST00000568108 UNC13BO14795 1591 aa9.67□□□□□ -0.86
PTPN9-205ENST00000568108 NUTM2BA6NNL0 878 aaPredicted RBP9.67□□□□□ -0.86
PTPN9-205ENST00000568108 NUTM2EB1AL46 878 aaPredicted RBP9.67□□□□□ -0.86
PTPN9-205ENST00000568108 NUTM2AQ8IVF1 878 aaPredicted RBP9.67□□□□□ -0.86
PTPN9-205ENST00000568108 E9PCH4 1651 aa9.67□□□□□ -0.86
PTPN9-205ENST00000568108 LRP6O75581 1613 aa9.67□□□□□ -0.86
PTPN9-205ENST00000568108 PTPRUQ92729 1446 aa9.66□□□□□ -0.86
PTPN9-205ENST00000568108 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.66□□□□□ -0.86
PTPN9-205ENST00000568108 RXRBP28702 533 aa9.66□□□□□ -0.86
PTPN9-205ENST00000568108 ZNF326Q5BKZ1 582 aaKnown RBP9.66□□□□□ -0.86
PTPN9-205ENST00000568108 DIP2AQ14689 1571 aa9.66□□□□□ -0.86
PTPN9-205ENST00000568108 UPF1Q92900 1129 aaKnown RBP eCLIP9.65□□□□□ -0.86
PTPN9-205ENST00000568108 TRPM2O94759 1503 aa9.65□□□□□ -0.86
PTPN9-205ENST00000568108 AHDC1Q5TGY3 1603 aaPredicted RBP9.64□□□□□ -0.87
PTPN9-205ENST00000568108 IQGAP3Q86VI3 1631 aa9.64□□□□□ -0.87
PTPN9-205ENST00000568108 PPARGC1BQ86YN6 1023 aaKnown RBP9.64□□□□□ -0.87
PTPN9-205ENST00000568108 LRRC59Q96AG4 307 aaKnown RBP9.64□□□□□ -0.87
PTPN9-205ENST00000568108 SETD1AO15047 1707 aaKnown RBP9.64□□□□□ -0.87
PTPN9-205ENST00000568108 METP08581 1390 aa9.63□□□□□ -0.87
PTPN9-205ENST00000568108 AFF2P51816 1311 aa9.62□□□□□ -0.87
PTPN9-205ENST00000568108 DCCP43146 1447 aa9.62□□□□□ -0.87
PTPN9-205ENST00000568108 SHPRHQ149N8 1683 aa9.61□□□□□ -0.87
PTPN9-205ENST00000568108 DDX17Q92841 729 aaKnown RBP9.61□□□□□ -0.87
PTPN9-205ENST00000568108 MST1RQ04912 1400 aa9.61□□□□□ -0.87
PTPN9-205ENST00000568108 SETD5Q9C0A6 1442 aa9.61□□□□□ -0.87
PTPN9-205ENST00000568108 C8orf37Q96NL8 207 aa9.6□□□□□ -0.87
PTPN9-205ENST00000568108 QTRT2Q9H974 415 aaKnown RBP9.6□□□□□ -0.87
PTPN9-205ENST00000568108 ASXL1Q8IXJ9 1541 aa9.6□□□□□ -0.87
PTPN9-205ENST00000568108 SETBP1Q9Y6X0 1596 aa9.59□□□□□ -0.87
PTPN9-205ENST00000568108 RBM6P78332 1123 aaKnown RBP9.59□□□□□ -0.87
PTPN9-205ENST00000568108 NRXN3Q9Y4C0 1643 aa9.59□□□□□ -0.87
PTPN9-205ENST00000568108 ADGRL3Q9HAR2 1447 aa9.58□□□□□ -0.88
PTPN9-205ENST00000568108 VGFO15240 615 aaPredicted RBP9.58□□□□□ -0.88
PTPN9-205ENST00000568108 ADAMTS2O95450 1211 aa9.58□□□□□ -0.88
PTPN9-205ENST00000568108 NGLY1Q96IV0 654 aa9.58□□□□□ -0.88
PTPN9-205ENST00000568108 XRN1Q8IZH2 1706 aaKnown RBP9.58□□□□□ -0.88
PTPN9-205ENST00000568108 CDK12Q9NYV4 1490 aaPredicted RBP9.58□□□□□ -0.88
PTPN9-205ENST00000568108 PNPLA6Q8IY17 1366 aa9.57□□□□□ -0.88
PTPN9-205ENST00000568108 SPHKAPQ2M3C7 1700 aa9.56□□□□□ -0.88
PTPN9-205ENST00000568108 ORAI2Q96SN7 254 aa9.56□□□□□ -0.88
PTPN9-205ENST00000568108 C1orf167Q5SNV9 1468 aa9.55□□□□□ -0.88
PTPN9-205ENST00000568108 HOXD11P31277 338 aaPredicted RBP9.55□□□□□ -0.88
PTPN9-205ENST00000568108 TRIM26Q12899 539 aaPredicted RBP9.55□□□□□ -0.88
PTPN9-205ENST00000568108 NHSL1Q5SYE7 1610 aa9.55□□□□□ -0.88
PTPN9-205ENST00000568108 NEXMIFQ5QGS0 1516 aa9.55□□□□□ -0.88
PTPN9-205ENST00000568108 SOS2Q07890 1332 aaPredicted RBP9.55□□□□□ -0.88
PTPN9-205ENST00000568108 ROBO2Q9HCK4 1378 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms