RNA–Protein interactions for RNA: ENST00000568034.1

COMMD4-222, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-222ENST00000568034 MED14O60244 1454 aa26.27■■□□□ 1.8
COMMD4-222ENST00000568034 IFT172Q9UG01 1749 aa26.26■■□□□ 1.79
COMMD4-222ENST00000568034 ZNF326Q5BKZ1 582 aaKnown RBP26.26■■□□□ 1.79
COMMD4-222ENST00000568034 ANKLE2Q86XL3 938 aa26.26■■□□□ 1.79
COMMD4-222ENST00000568034 PPLO60437 1756 aa26.25■■□□□ 1.79
COMMD4-222ENST00000568034 TXNDC2Q86VQ3 553 aa26.25■■□□□ 1.79
COMMD4-222ENST00000568034 RGL3Q3MIN7 710 aa26.23■■□□□ 1.79
COMMD4-222ENST00000568034 RPGRIP1LQ68CZ1 1315 aa26.22■■□□□ 1.79
COMMD4-222ENST00000568034 NPHP4O75161 1426 aaPredicted RBP26.22■■□□□ 1.79
COMMD4-222ENST00000568034 NUTM2DQ5VT03 806 aaPredicted RBP26.21■■□□□ 1.79
COMMD4-222ENST00000568034 EID1Q9Y6B2 187 aa26.21■■□□□ 1.79
COMMD4-222ENST00000568034 IQGAP1P46940 1657 aa26.2■■□□□ 1.78
COMMD4-222ENST00000568034 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.2■■□□□ 1.78
COMMD4-222ENST00000568034 PLEKHG1Q9ULL1 1385 aa26.2■■□□□ 1.78
COMMD4-222ENST00000568034 CLSPNQ9HAW4 1339 aa26.19■■□□□ 1.78
COMMD4-222ENST00000568034 NRXN3Q9Y4C0 1643 aa26.17■■□□□ 1.78
COMMD4-222ENST00000568034 HDGFP51858 240 aaKnown RBP26.16■■□□□ 1.78
COMMD4-222ENST00000568034 NEUROD1Q13562 356 aa26.16■■□□□ 1.78
COMMD4-222ENST00000568034 MYOM2P54296 1465 aa26.16■■□□□ 1.78
COMMD4-222ENST00000568034 PPP1R15AO75807 674 aaPredicted RBP26.15■■□□□ 1.78
COMMD4-222ENST00000568034 CCER1Q8TC90 406 aaPredicted RBP26.15■■□□□ 1.78
COMMD4-222ENST00000568034 SETBP1Q9Y6X0 1596 aa26.15■■□□□ 1.78
COMMD4-222ENST00000568034 NRXN1Q9ULB1 1477 aa26.14■■□□□ 1.78
COMMD4-222ENST00000568034 ADGRF5Q8IZF2 1346 aa26.14■■□□□ 1.77
COMMD4-222ENST00000568034 ADAMTS13Q76LX8 1427 aa26.13■■□□□ 1.77
COMMD4-222ENST00000568034 VGFO15240 615 aaPredicted RBP26.1■■□□□ 1.77
COMMD4-222ENST00000568034 DMRT2Q9Y5R5 561 aa26.1■■□□□ 1.77
COMMD4-222ENST00000568034 PIK3C2GO75747 1445 aa26.09■■□□□ 1.77
COMMD4-222ENST00000568034 L3MBTL2Q969R5 705 aa26.08■■□□□ 1.77
COMMD4-222ENST00000568034 SENP3Q9H4L4 574 aaPredicted RBP26.08■■□□□ 1.77
COMMD4-222ENST00000568034 DCAF11Q8TEB1 546 aa26.07■■□□□ 1.76
COMMD4-222ENST00000568034 SETD1AO15047 1707 aaKnown RBP26.07■■□□□ 1.76
COMMD4-222ENST00000568034 DIP2AQ14689 1571 aa26.07■■□□□ 1.76
COMMD4-222ENST00000568034 SLC26A8Q96RN1 970 aa26.05■■□□□ 1.76
COMMD4-222ENST00000568034 ALKQ9UM73 1620 aa26.03■■□□□ 1.76
COMMD4-222ENST00000568034 KDM2AQ9Y2K7 1162 aa26.03■■□□□ 1.76
COMMD4-222ENST00000568034 STAC3Q96MF2 364 aa26.02■■□□□ 1.76
COMMD4-222ENST00000568034 TBX22Q9Y458 520 aa26.02■■□□□ 1.76
COMMD4-222ENST00000568034 TONSLQ96HA7 1378 aa26.02■■□□□ 1.76
COMMD4-222ENST00000568034 PRAG1Q86YV5 1406 aa26■■□□□ 1.75
COMMD4-222ENST00000568034 BCANQ96GW7 911 aa26■■□□□ 1.75
COMMD4-222ENST00000568034 ASXL1Q8IXJ9 1541 aa25.99■■□□□ 1.75
COMMD4-222ENST00000568034 METP08581 1390 aa25.98■■□□□ 1.75
COMMD4-222ENST00000568034 ILDR1Q86SU0 546 aaPredicted RBP25.98■■□□□ 1.75
COMMD4-222ENST00000568034 ZNF335Q9H4Z2 1342 aaPredicted RBP25.97■■□□□ 1.75
COMMD4-222ENST00000568034 STRCP1A6NGW2 1772 aa25.97■■□□□ 1.75
COMMD4-222ENST00000568034 NWD1Q149M9 1564 aa25.96■■□□□ 1.75
COMMD4-222ENST00000568034 PTPRUQ92729 1446 aa25.96■■□□□ 1.75
COMMD4-222ENST00000568034 LAMC1P11047 1609 aa25.96■■□□□ 1.75
COMMD4-222ENST00000568034 PIK3R4Q99570 1358 aa25.95■■□□□ 1.75
COMMD4-222ENST00000568034 C14orf93Q9H972 538 aaKnown RBP25.95■■□□□ 1.74
COMMD4-222ENST00000568034 CHD2O14647 1828 aaKnown RBP25.94■■□□□ 1.74
COMMD4-222ENST00000568034 LTBP4Q8N2S1 1624 aa25.94■■□□□ 1.74
COMMD4-222ENST00000568034 CFAP70Q5T0N1 1121 aa25.93■■□□□ 1.74
COMMD4-222ENST00000568034 ADGRB1O14514 1584 aa25.91■■□□□ 1.74
COMMD4-222ENST00000568034 TIMELESSQ9UNS1 1208 aa25.91■■□□□ 1.74
COMMD4-222ENST00000568034 XRN1Q8IZH2 1706 aaKnown RBP25.91■■□□□ 1.74
COMMD4-222ENST00000568034 KIAA1210Q9ULL0 1709 aa25.91■■□□□ 1.74
COMMD4-222ENST00000568034 KCNA6P17658 529 aa25.89■■□□□ 1.74
COMMD4-222ENST00000568034 NBPF8Q3BBV2 869 aa25.89■■□□□ 1.74
COMMD4-222ENST00000568034 TRPM1Q7Z4N2 1603 aa25.88■■□□□ 1.73
COMMD4-222ENST00000568034 TMEM132EQ6IEE7 984 aa25.86■■□□□ 1.73
COMMD4-222ENST00000568034 NKTRP30414 1462 aaKnown RBP25.85■■□□□ 1.73
COMMD4-222ENST00000568034 CPS1P31327 1500 aa25.85■■□□□ 1.73
COMMD4-222ENST00000568034 AMOTL2Q9Y2J4 779 aa25.83■■□□□ 1.73
COMMD4-222ENST00000568034 LRPPRCP42704 1394 aaKnown RBP25.82■■□□□ 1.72
COMMD4-222ENST00000568034 YTHDC2Q9H6S0 1430 aaKnown RBP25.82■■□□□ 1.72
COMMD4-222ENST00000568034 NBPF1Q3BBV0 1214 aa25.82■■□□□ 1.72
COMMD4-222ENST00000568034 KNDC1Q76NI1 1749 aa25.82■■□□□ 1.72
COMMD4-222ENST00000568034 TECPR2O15040 1411 aa25.81■■□□□ 1.72
COMMD4-222ENST00000568034 RALGAPBQ86X10 1494 aa25.81■■□□□ 1.72
COMMD4-222ENST00000568034 LRRC7Q96NW7 1537 aa25.81■■□□□ 1.72
COMMD4-222ENST00000568034 PTCH1Q13635 1447 aa25.8■■□□□ 1.72
COMMD4-222ENST00000568034 ABCC11Q96J66 1382 aa25.79■■□□□ 1.72
COMMD4-222ENST00000568034 GPRASP1Q5JY77 1395 aa25.77■■□□□ 1.72
COMMD4-222ENST00000568034 ROBO2Q9HCK4 1378 aa25.77■■□□□ 1.72
COMMD4-222ENST00000568034 XIRP1Q702N8 1843 aaKnown RBP25.77■■□□□ 1.72
COMMD4-222ENST00000568034 DLC1Q96QB1 1528 aa25.74■■□□□ 1.71
COMMD4-222ENST00000568034 STK26Q9P289 416 aa25.74■■□□□ 1.71
COMMD4-222ENST00000568034 ROCK2O75116 1388 aaKnown RBP25.73■■□□□ 1.71
COMMD4-222ENST00000568034 TMEM94Q12767 1356 aa25.73■■□□□ 1.71
COMMD4-222ENST00000568034 PROSER2Q86WR7 435 aaPredicted RBP25.71■■□□□ 1.71
COMMD4-222ENST00000568034 RBM33Q96EV2 1170 aaKnown RBP25.71■■□□□ 1.71
COMMD4-222ENST00000568034 ARHGEF28Q8N1W1 1705 aaKnown RBP25.71■■□□□ 1.71
COMMD4-222ENST00000568034 FBXO41Q8TF61 875 aa25.7■■□□□ 1.7
COMMD4-222ENST00000568034 FAM135BQ49AJ0 1406 aa25.7■■□□□ 1.7
COMMD4-222ENST00000568034 PLEKHH1Q9ULM0 1364 aa25.69■■□□□ 1.7
COMMD4-222ENST00000568034 IQSEC2Q5JU85 1478 aa25.68■■□□□ 1.7
COMMD4-222ENST00000568034 SIRT1Q96EB6 747 aa25.68■■□□□ 1.7
COMMD4-222ENST00000568034 TRAK1Q9UPV9 953 aa25.68■■□□□ 1.7
COMMD4-222ENST00000568034 NCOA3Q9Y6Q9 1424 aa25.68■■□□□ 1.7
COMMD4-222ENST00000568034 CERKQ8TCT0 537 aa25.67■■□□□ 1.7
COMMD4-222ENST00000568034 WAPLQ7Z5K2 1190 aa25.66■■□□□ 1.7
COMMD4-222ENST00000568034 NALCNQ8IZF0 1738 aa25.65■■□□□ 1.7
COMMD4-222ENST00000568034 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.63■■□□□ 1.69
COMMD4-222ENST00000568034 CARD11Q9BXL7 1154 aa25.63■■□□□ 1.69
COMMD4-222ENST00000568034 ADGRL3Q9HAR2 1447 aa25.63■■□□□ 1.69
COMMD4-222ENST00000568034 PRAM1Q96QH2 718 aa25.62■■□□□ 1.69
COMMD4-222ENST00000568034 ADGRB2O60241 1585 aa25.56■■□□□ 1.68
COMMD4-222ENST00000568034 MSH6P52701 1360 aa25.56■■□□□ 1.68
Retrieved 100 of 20,778 RNA–protein pairs in 98.8 ms