RNA–Protein interactions for RNA: ENST00000567966.1

LINC01228-201, Transcript of long intergenic non-protein coding RNA 1228, humanhuman

TSL 3 BASIC

Gene LINC01228, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01228-201ENST00000567966 TOM1O60784 492 aa16.6■□□□□ 0.25
LINC01228-201ENST00000567966 EID1Q9Y6B2 187 aa16.6■□□□□ 0.25
LINC01228-201ENST00000567966 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
LINC01228-201ENST00000567966 HSPA1LP34931 641 aa16.59■□□□□ 0.25
LINC01228-201ENST00000567966 ADGRB3O60242 1522 aa16.59■□□□□ 0.25
LINC01228-201ENST00000567966 MYO5BQ9ULV0 1848 aa16.59■□□□□ 0.25
LINC01228-201ENST00000567966 GCC2Q8IWJ2 1684 aa16.58■□□□□ 0.24
LINC01228-201ENST00000567966 XIRP1Q702N8 1843 aaKnown RBP16.57■□□□□ 0.24
LINC01228-201ENST00000567966 RPRD2Q5VT52 1461 aaKnown RBP16.57■□□□□ 0.24
LINC01228-201ENST00000567966 E9PCH4 1651 aa16.56■□□□□ 0.24
LINC01228-201ENST00000567966 SLC26A8Q96RN1 970 aa16.55■□□□□ 0.24
LINC01228-201ENST00000567966 SLC52A1Q9NWF4 448 aa16.55■□□□□ 0.24
LINC01228-201ENST00000567966 IQGAP3Q86VI3 1631 aa16.54■□□□□ 0.24
LINC01228-201ENST00000567966 TMEM131LA2VDJ0 1609 aa16.53■□□□□ 0.24
LINC01228-201ENST00000567966 RNF216Q9NWF9 866 aaPredicted RBP16.52■□□□□ 0.24
LINC01228-201ENST00000567966 HFM1A2PYH4 1435 aa16.52■□□□□ 0.23
LINC01228-201ENST00000567966 HRCP23327 699 aa16.51■□□□□ 0.23
LINC01228-201ENST00000567966 ZFYVE9O95405 1425 aa16.51■□□□□ 0.23
LINC01228-201ENST00000567966 TRIM26Q12899 539 aaPredicted RBP16.5■□□□□ 0.23
LINC01228-201ENST00000567966 RBM33Q96EV2 1170 aaKnown RBP16.5■□□□□ 0.23
LINC01228-201ENST00000567966 NAIPQ13075 1403 aa16.5■□□□□ 0.23
LINC01228-201ENST00000567966 NUP155O75694 1391 aa16.5■□□□□ 0.23
LINC01228-201ENST00000567966 CHGAP10645 457 aaKnown RBP16.49■□□□□ 0.23
LINC01228-201ENST00000567966 RIMS2Q9UQ26 1411 aa16.49■□□□□ 0.23
LINC01228-201ENST00000567966 KCNA6P17658 529 aa16.48■□□□□ 0.23
LINC01228-201ENST00000567966 BCANQ96GW7 911 aa16.47■□□□□ 0.23
LINC01228-201ENST00000567966 MED1Q15648 1581 aaPredicted RBP16.47■□□□□ 0.23
LINC01228-201ENST00000567966 NUTM2DQ5VT03 806 aaPredicted RBP16.46■□□□□ 0.23
LINC01228-201ENST00000567966 TMEM94Q12767 1356 aa16.46■□□□□ 0.23
LINC01228-201ENST00000567966 PROSER2Q86WR7 435 aaPredicted RBP16.45■□□□□ 0.22
LINC01228-201ENST00000567966 PLEKHG1Q9ULL1 1385 aa16.45■□□□□ 0.22
LINC01228-201ENST00000567966 NWD1Q149M9 1564 aa16.45■□□□□ 0.22
LINC01228-201ENST00000567966 SETD5Q9C0A6 1442 aa16.44■□□□□ 0.22
LINC01228-201ENST00000567966 CHD2O14647 1828 aaKnown RBP16.43■□□□□ 0.22
LINC01228-201ENST00000567966 PPP1R15AO75807 674 aaPredicted RBP16.43■□□□□ 0.22
LINC01228-201ENST00000567966 SOCS7O14512 581 aa16.42■□□□□ 0.22
LINC01228-201ENST00000567966 SPHKAPQ2M3C7 1700 aa16.42■□□□□ 0.22
LINC01228-201ENST00000567966 HOXD11P31277 338 aaPredicted RBP16.41■□□□□ 0.22
LINC01228-201ENST00000567966 NKTRP30414 1462 aaKnown RBP16.41■□□□□ 0.22
LINC01228-201ENST00000567966 ADAMTS13Q76LX8 1427 aa16.4■□□□□ 0.22
LINC01228-201ENST00000567966 HDGFP51858 240 aaKnown RBP16.4■□□□□ 0.22
LINC01228-201ENST00000567966 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.39■□□□□ 0.21
LINC01228-201ENST00000567966 SLC4A1APQ9BWU0 796 aaKnown RBP16.39■□□□□ 0.21
LINC01228-201ENST00000567966 TBX22Q9Y458 520 aa16.39■□□□□ 0.21
LINC01228-201ENST00000567966 TRIM52Q96A61 297 aa16.38■□□□□ 0.21
LINC01228-201ENST00000567966 FAM135BQ49AJ0 1406 aa16.37■□□□□ 0.21
LINC01228-201ENST00000567966 ROBO1Q9Y6N7 1651 aa16.37■□□□□ 0.21
LINC01228-201ENST00000567966 CLTCL1P53675 1640 aa16.35■□□□□ 0.21
LINC01228-201ENST00000567966 MSH6P52701 1360 aa16.34■□□□□ 0.21
LINC01228-201ENST00000567966 RAB3GAP2Q9H2M9 1393 aa16.34■□□□□ 0.21
LINC01228-201ENST00000567966 PTPRUQ92729 1446 aa16.34■□□□□ 0.21
LINC01228-201ENST00000567966 DIP2AQ14689 1571 aa16.34■□□□□ 0.21
LINC01228-201ENST00000567966 NRXN3Q9Y4C0 1643 aa16.34■□□□□ 0.21
LINC01228-201ENST00000567966 MPHOSPH9Q99550 1183 aa16.32■□□□□ 0.2
LINC01228-201ENST00000567966 TRPM2O94759 1503 aa16.31■□□□□ 0.2
LINC01228-201ENST00000567966 ZNF326Q5BKZ1 582 aaKnown RBP16.31■□□□□ 0.2
LINC01228-201ENST00000567966 SLAIN2Q9P270 581 aa16.31■□□□□ 0.2
LINC01228-201ENST00000567966 PIK3R4Q99570 1358 aa16.3■□□□□ 0.2
LINC01228-201ENST00000567966 AMOTL2Q9Y2J4 779 aa16.3■□□□□ 0.2
LINC01228-201ENST00000567966 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.3■□□□□ 0.2
LINC01228-201ENST00000567966 PCGF6Q9BYE7 350 aa16.29■□□□□ 0.2
LINC01228-201ENST00000567966 SETBP1Q9Y6X0 1596 aa16.29■□□□□ 0.2
LINC01228-201ENST00000567966 NEXMIFQ5QGS0 1516 aa16.29■□□□□ 0.2
LINC01228-201ENST00000567966 KIF1BO60333 1816 aa16.29■□□□□ 0.2
LINC01228-201ENST00000567966 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
LINC01228-201ENST00000567966 C14orf37Q86TY3 774 aa16.27■□□□□ 0.2
LINC01228-201ENST00000567966 PHLPP1O60346 1717 aa16.27■□□□□ 0.19
LINC01228-201ENST00000567966 XRN1Q8IZH2 1706 aaKnown RBP16.27■□□□□ 0.19
LINC01228-201ENST00000567966 METP08581 1390 aa16.26■□□□□ 0.19
LINC01228-201ENST00000567966 RGS17Q9UGC6 210 aaPredicted RBP16.26■□□□□ 0.19
LINC01228-201ENST00000567966 C19orf44Q9H6X5 657 aa16.24■□□□□ 0.19
LINC01228-201ENST00000567966 COL16A1Q07092 1604 aaPredicted RBP16.22■□□□□ 0.19
LINC01228-201ENST00000567966 ATF3P18847 181 aa16.21■□□□□ 0.19
LINC01228-201ENST00000567966 CADPS2Q86UW7 1296 aa16.21■□□□□ 0.19
LINC01228-201ENST00000567966 SETD1AO15047 1707 aaKnown RBP16.2■□□□□ 0.18
LINC01228-201ENST00000567966 PPLO60437 1756 aa16.18■□□□□ 0.18
LINC01228-201ENST00000567966 NALCNQ8IZF0 1738 aa16.17■□□□□ 0.18
LINC01228-201ENST00000567966 JCADQ9P266 1359 aa16.17■□□□□ 0.18
LINC01228-201ENST00000567966 AHDC1Q5TGY3 1603 aaPredicted RBP16.17■□□□□ 0.18
LINC01228-201ENST00000567966 POTEAQ6S8J7 498 aa16.17■□□□□ 0.18
LINC01228-201ENST00000567966 BRINP3Q76B58 766 aa16.17■□□□□ 0.18
LINC01228-201ENST00000567966 VGFO15240 615 aaPredicted RBP16.16■□□□□ 0.18
LINC01228-201ENST00000567966 DCCP43146 1447 aa16.15■□□□□ 0.18
LINC01228-201ENST00000567966 MST1RQ04912 1400 aa16.15■□□□□ 0.18
LINC01228-201ENST00000567966 RPGRIP1LQ68CZ1 1315 aa16.14■□□□□ 0.17
LINC01228-201ENST00000567966 ADGRL3Q9HAR2 1447 aa16.13■□□□□ 0.17
LINC01228-201ENST00000567966 LRP6O75581 1613 aa16.13■□□□□ 0.17
LINC01228-201ENST00000567966 ASXL1Q8IXJ9 1541 aa16.13■□□□□ 0.17
LINC01228-201ENST00000567966 ROBO2Q9HCK4 1378 aa16.13■□□□□ 0.17
LINC01228-201ENST00000567966 RGL3Q3MIN7 710 aa16.12■□□□□ 0.17
LINC01228-201ENST00000567966 ADGRF5Q8IZF2 1346 aa16.12■□□□□ 0.17
LINC01228-201ENST00000567966 ANKRD30BQ9BXX2 1392 aa16.12■□□□□ 0.17
LINC01228-201ENST00000567966 SHPRHQ149N8 1683 aa16.11■□□□□ 0.17
LINC01228-201ENST00000567966 DDX17Q92841 729 aaKnown RBP16.11■□□□□ 0.17
LINC01228-201ENST00000567966 NHSL1Q5SYE7 1610 aa16.11■□□□□ 0.17
LINC01228-201ENST00000567966 IFT172Q9UG01 1749 aa16.11■□□□□ 0.17
LINC01228-201ENST00000567966 CCDC144AA2RUR9 1427 aa16.11■□□□□ 0.17
LINC01228-201ENST00000567966 SPATA31E1Q6ZUB1 1445 aa16.11■□□□□ 0.17
LINC01228-201ENST00000567966 DCAF8L1A6NGE4 600 aa16.09■□□□□ 0.17
LINC01228-201ENST00000567966 PTCH1Q13635 1447 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms