RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 TMEM134Q9H6X4 195 aa8.94□□□□□ -0.98
HERPUD1-212ENST00000567944 DNAJB2P25686 324 aa8.93□□□□□ -0.98
HERPUD1-212ENST00000567944 GPBP1L1Q9HC44 474 aaPredicted RBP8.93□□□□□ -0.98
HERPUD1-212ENST00000567944 MRPL50Q8N5N7 158 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-212ENST00000567944 ZFRQ96KR1 1074 aaKnown RBP8.92□□□□□ -0.98
HERPUD1-212ENST00000567944 IRX2Q9BZI1 471 aaPredicted RBP8.92□□□□□ -0.98
HERPUD1-212ENST00000567944 SWT1Q5T5J6 900 aaKnown RBP8.9□□□□□ -0.98
HERPUD1-212ENST00000567944 GPCPD1Q9NPB8 672 aa8.9□□□□□ -0.98
HERPUD1-212ENST00000567944 DAXXQ9UER7 740 aaPredicted RBP8.9□□□□□ -0.98
HERPUD1-212ENST00000567944 CLCN1P35523 988 aa8.89□□□□□ -0.99
HERPUD1-212ENST00000567944 GIGYF2Q6Y7W6 1299 aaKnown RBP8.89□□□□□ -0.99
HERPUD1-212ENST00000567944 SAMD7Q7Z3H4 446 aa8.89□□□□□ -0.99
HERPUD1-212ENST00000567944 KDM4CQ9H3R0 1056 aa8.89□□□□□ -0.99
HERPUD1-212ENST00000567944 MS4A1P11836 297 aa8.88□□□□□ -0.99
HERPUD1-212ENST00000567944 TTLL12Q14166 644 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-212ENST00000567944 NEUROD2Q15784 382 aa8.88□□□□□ -0.99
HERPUD1-212ENST00000567944 FAM217BQ9NTX9 383 aaPredicted RBP8.88□□□□□ -0.99
HERPUD1-212ENST00000567944 RGS20O76081 388 aa8.86□□□□□ -0.99
HERPUD1-212ENST00000567944 SLC10A3P09131 477 aa8.86□□□□□ -0.99
HERPUD1-212ENST00000567944 SSTR3P32745 418 aaPredicted RBP8.85□□□□□ -0.99
HERPUD1-212ENST00000567944 A0A0G2JS52 829 aa8.84□□□□□ -0.99
HERPUD1-212ENST00000567944 SOWAHBA6NEL2 793 aa8.84□□□□□ -0.99
HERPUD1-212ENST00000567944 BCAMP50895 628 aa8.84□□□□□ -0.99
HERPUD1-212ENST00000567944 CD46P15529 392 aa8.83□□□□□ -1
HERPUD1-212ENST00000567944 IFFO2Q5TF58 517 aa8.83□□□□□ -1
HERPUD1-212ENST00000567944 THSD4Q6ZMP0 1018 aa8.83□□□□□ -1
HERPUD1-212ENST00000567944 WNT2BQ93097 391 aa8.83□□□□□ -1
HERPUD1-212ENST00000567944 FAM117AQ9C073 453 aa8.83□□□□□ -1
HERPUD1-212ENST00000567944 DDX11L8A8MPP1 907 aa8.82□□□□□ -1
HERPUD1-212ENST00000567944 ANKK1Q8NFD2 765 aa8.82□□□□□ -1
HERPUD1-212ENST00000567944 LRCH3Q96II8 777 aa8.82□□□□□ -1
HERPUD1-212ENST00000567944 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.82□□□□□ -1
HERPUD1-212ENST00000567944 PLEKHG3A1L390 1219 aa8.81□□□□□ -1
HERPUD1-212ENST00000567944 GOLGA8CPA6NN73 597 aa8.8□□□□□ -1
HERPUD1-212ENST00000567944 HDGFP51858 240 aaKnown RBP8.79□□□□□ -1
HERPUD1-212ENST00000567944 SULF1Q8IWU6 871 aa8.79□□□□□ -1
HERPUD1-212ENST00000567944 SLF2Q8IX21 1173 aa8.79□□□□□ -1
HERPUD1-212ENST00000567944 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
HERPUD1-212ENST00000567944 GCGRP47871 477 aa8.77□□□□□ -1.01
HERPUD1-212ENST00000567944 WBP1LQ9NX94 342 aa8.77□□□□□ -1.01
HERPUD1-212ENST00000567944 TSR3Q9UJK0 312 aaKnown RBP8.77□□□□□ -1.01
HERPUD1-212ENST00000567944 HPS5Q9UPZ3 1129 aa8.77□□□□□ -1.01
HERPUD1-212ENST00000567944 RDH13Q8NBN7 331 aa8.76□□□□□ -1.01
HERPUD1-212ENST00000567944 IL27Q8NEV9 243 aa8.76□□□□□ -1.01
HERPUD1-212ENST00000567944 RNF40O75150 1001 aa8.75□□□□□ -1.01
HERPUD1-212ENST00000567944 CFHP08603 1231 aa8.74□□□□□ -1.01
HERPUD1-212ENST00000567944 APLP1P51693 650 aa8.74□□□□□ -1.01
HERPUD1-212ENST00000567944 SPIRE2Q8WWL2 714 aa8.74□□□□□ -1.01
HERPUD1-212ENST00000567944 PPP4CP60510 307 aa8.73□□□□□ -1.01
HERPUD1-212ENST00000567944 Q6ZNB5 142 aa8.73□□□□□ -1.01
HERPUD1-212ENST00000567944 DDRGK1Q96HY6 314 aa8.73□□□□□ -1.01
HERPUD1-212ENST00000567944 TBC1D2Q9BYX2 928 aa8.72□□□□□ -1.01
HERPUD1-212ENST00000567944 ACTN4O43707 911 aaKnown RBP8.71□□□□□ -1.02
HERPUD1-212ENST00000567944 KDM4AO75164 1064 aa8.71□□□□□ -1.02
HERPUD1-212ENST00000567944 SLC4A3P48751 1232 aa8.71□□□□□ -1.02
HERPUD1-212ENST00000567944 RSPH4AQ5TD94 716 aa8.71□□□□□ -1.02
HERPUD1-212ENST00000567944 FUT2Q10981 343 aa8.7□□□□□ -1.02
HERPUD1-212ENST00000567944 MYSM1Q5VVJ2 828 aa8.7□□□□□ -1.02
HERPUD1-212ENST00000567944 HLA-CQ95604 372 aa8.69□□□□□ -1.02
HERPUD1-212ENST00000567944 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
HERPUD1-212ENST00000567944 HOXA2O43364 376 aa8.68□□□□□ -1.02
HERPUD1-212ENST00000567944 NECTIN2Q92692 538 aa8.68□□□□□ -1.02
HERPUD1-212ENST00000567944 NDUFV2P19404 249 aa8.67□□□□□ -1.02
HERPUD1-212ENST00000567944 TMEM132AQ24JP5 1023 aa8.67□□□□□ -1.02
HERPUD1-212ENST00000567944 KMT5BQ4FZB7 885 aa8.67□□□□□ -1.02
HERPUD1-212ENST00000567944 SH3D19Q5HYK7 790 aa8.67□□□□□ -1.02
HERPUD1-212ENST00000567944 USP46P62068 366 aa8.66□□□□□ -1.02
HERPUD1-212ENST00000567944 PUS10Q3MIT2 529 aaKnown RBP8.66□□□□□ -1.02
HERPUD1-212ENST00000567944 MORN1Q5T089 497 aa8.66□□□□□ -1.02
HERPUD1-212ENST00000567944 NUTM1Q86Y26 1132 aa8.66□□□□□ -1.02
HERPUD1-212ENST00000567944 LIMD1Q9UGP4 676 aa8.66□□□□□ -1.02
HERPUD1-212ENST00000567944 SPTLC1O15269 473 aa8.65□□□□□ -1.02
HERPUD1-212ENST00000567944 ATP6V1AP38606 617 aa8.65□□□□□ -1.02
HERPUD1-212ENST00000567944 GUCA2AQ02747 115 aa8.65□□□□□ -1.02
HERPUD1-212ENST00000567944 FBXO31Q5XUX0 539 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-212ENST00000567944 RSBN1LQ6PCB5 846 aaPredicted RBP8.65□□□□□ -1.02
HERPUD1-212ENST00000567944 NYAP1Q6ZVC0 841 aa8.65□□□□□ -1.02
HERPUD1-212ENST00000567944 GOPCQ9HD26 462 aa8.65□□□□□ -1.02
HERPUD1-212ENST00000567944 PCDHGC3Q9UN70 934 aa8.65□□□□□ -1.02
HERPUD1-212ENST00000567944 ITGBL1O95965 494 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-212ENST00000567944 SKIV2LQ15477 1246 aaKnown RBP8.64□□□□□ -1.03
HERPUD1-212ENST00000567944 PROCA1Q8NCQ7 364 aaPredicted RBP8.64□□□□□ -1.03
HERPUD1-212ENST00000567944 PRR14Q9BWN1 585 aa8.64□□□□□ -1.03
HERPUD1-212ENST00000567944 RSPH6AQ9H0K4 717 aa8.64□□□□□ -1.03
HERPUD1-212ENST00000567944 POLR3EQ9NVU0 708 aa8.64□□□□□ -1.03
HERPUD1-212ENST00000567944 PCDHB15Q9Y5E8 787 aa8.64□□□□□ -1.03
HERPUD1-212ENST00000567944 DIXDC1Q155Q3 683 aa8.63□□□□□ -1.03
HERPUD1-212ENST00000567944 TJAP1Q5JTD0 557 aa8.63□□□□□ -1.03
HERPUD1-212ENST00000567944 BLOC1S3Q6QNY0 202 aa8.63□□□□□ -1.03
HERPUD1-212ENST00000567944 RIC3Q7Z5B4 369 aa8.63□□□□□ -1.03
HERPUD1-212ENST00000567944 SLC27A5Q9Y2P5 690 aa8.63□□□□□ -1.03
HERPUD1-212ENST00000567944 GJA5P36382 358 aa8.62□□□□□ -1.03
HERPUD1-212ENST00000567944 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.62□□□□□ -1.03
HERPUD1-212ENST00000567944 PCDHB3Q9Y5E6 796 aa8.62□□□□□ -1.03
HERPUD1-212ENST00000567944 CLK2P49760 499 aaKnown RBP8.61□□□□□ -1.03
HERPUD1-212ENST00000567944 TUSC1Q2TAM9 212 aa8.61□□□□□ -1.03
HERPUD1-212ENST00000567944 SCUBE3Q8IX30 993 aa8.61□□□□□ -1.03
HERPUD1-212ENST00000567944 MTRQ99707 1265 aa8.61□□□□□ -1.03
HERPUD1-212ENST00000567944 LCE2BO14633 110 aa8.6□□□□□ -1.03
HERPUD1-212ENST00000567944 FDX1P10109 184 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms