RNA–Protein interactions for RNA: ENST00000567843.1

GTF3C1-208, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 3

Gene GTF3C1, Length 474 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-208ENST00000567843 E9PCH4 1651 aa18.54■□□□□ 0.56
GTF3C1-208ENST00000567843 ALKQ9UM73 1620 aa18.54■□□□□ 0.56
GTF3C1-208ENST00000567843 KCNA6P17658 529 aa18.54■□□□□ 0.56
GTF3C1-208ENST00000567843 GCC2Q8IWJ2 1684 aa18.54■□□□□ 0.56
GTF3C1-208ENST00000567843 PROSER2Q86WR7 435 aaPredicted RBP18.53■□□□□ 0.56
GTF3C1-208ENST00000567843 IQGAP3Q86VI3 1631 aa18.52■□□□□ 0.56
GTF3C1-208ENST00000567843 KDM5AP29375 1690 aaKnown RBP18.52■□□□□ 0.56
GTF3C1-208ENST00000567843 TMEM94Q12767 1356 aa18.52■□□□□ 0.55
GTF3C1-208ENST00000567843 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
GTF3C1-208ENST00000567843 HDGFP51858 240 aaKnown RBP18.5■□□□□ 0.55
GTF3C1-208ENST00000567843 MYO5BQ9ULV0 1848 aa18.5■□□□□ 0.55
GTF3C1-208ENST00000567843 TMEM131LA2VDJ0 1609 aa18.49■□□□□ 0.55
GTF3C1-208ENST00000567843 TRIM52Q96A61 297 aa18.49■□□□□ 0.55
GTF3C1-208ENST00000567843 PLEKHG1Q9ULL1 1385 aa18.48■□□□□ 0.55
GTF3C1-208ENST00000567843 NAIPQ13075 1403 aa18.48■□□□□ 0.55
GTF3C1-208ENST00000567843 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.47■□□□□ 0.55
GTF3C1-208ENST00000567843 ZNF326Q5BKZ1 582 aaKnown RBP18.46■□□□□ 0.55
GTF3C1-208ENST00000567843 XIRP1Q702N8 1843 aaKnown RBP18.44■□□□□ 0.54
GTF3C1-208ENST00000567843 TBX22Q9Y458 520 aa18.43■□□□□ 0.54
GTF3C1-208ENST00000567843 ADAMTS13Q76LX8 1427 aa18.41■□□□□ 0.54
GTF3C1-208ENST00000567843 C14orf37Q86TY3 774 aa18.4■□□□□ 0.54
GTF3C1-208ENST00000567843 SLC4A1APQ9BWU0 796 aaKnown RBP18.39■□□□□ 0.53
GTF3C1-208ENST00000567843 HFM1A2PYH4 1435 aa18.39■□□□□ 0.53
GTF3C1-208ENST00000567843 MSH6P52701 1360 aa18.38■□□□□ 0.53
GTF3C1-208ENST00000567843 NKTRP30414 1462 aaKnown RBP18.38■□□□□ 0.53
GTF3C1-208ENST00000567843 NWD1Q149M9 1564 aa18.38■□□□□ 0.53
GTF3C1-208ENST00000567843 FOXD1Q16676 465 aa18.37■□□□□ 0.53
GTF3C1-208ENST00000567843 MED1Q15648 1581 aaPredicted RBP18.37■□□□□ 0.53
GTF3C1-208ENST00000567843 SPHKAPQ2M3C7 1700 aa18.37■□□□□ 0.53
GTF3C1-208ENST00000567843 AMOTL2Q9Y2J4 779 aa18.36■□□□□ 0.53
GTF3C1-208ENST00000567843 SOCS7O14512 581 aa18.35■□□□□ 0.53
GTF3C1-208ENST00000567843 PHF23Q9BUL5 403 aaPredicted RBP18.35■□□□□ 0.53
GTF3C1-208ENST00000567843 FAM135BQ49AJ0 1406 aa18.34■□□□□ 0.53
GTF3C1-208ENST00000567843 SLAIN2Q9P270 581 aa18.34■□□□□ 0.53
GTF3C1-208ENST00000567843 CLTCL1P53675 1640 aa18.34■□□□□ 0.53
GTF3C1-208ENST00000567843 PTPRUQ92729 1446 aa18.33■□□□□ 0.53
GTF3C1-208ENST00000567843 CHD2O14647 1828 aaKnown RBP18.33■□□□□ 0.53
GTF3C1-208ENST00000567843 TRPM2O94759 1503 aa18.31■□□□□ 0.52
GTF3C1-208ENST00000567843 METP08581 1390 aa18.3■□□□□ 0.52
GTF3C1-208ENST00000567843 PIK3R4Q99570 1358 aa18.3■□□□□ 0.52
GTF3C1-208ENST00000567843 ROBO1Q9Y6N7 1651 aa18.28■□□□□ 0.52
GTF3C1-208ENST00000567843 DIP2AQ14689 1571 aa18.28■□□□□ 0.52
GTF3C1-208ENST00000567843 ATF3P18847 181 aa18.27■□□□□ 0.52
GTF3C1-208ENST00000567843 C19orf44Q9H6X5 657 aa18.27■□□□□ 0.52
GTF3C1-208ENST00000567843 NRXN3Q9Y4C0 1643 aa18.27■□□□□ 0.51
GTF3C1-208ENST00000567843 NEXMIFQ5QGS0 1516 aa18.26■□□□□ 0.51
GTF3C1-208ENST00000567843 MPHOSPH9Q99550 1183 aa18.25■□□□□ 0.51
GTF3C1-208ENST00000567843 RGL3Q3MIN7 710 aa18.24■□□□□ 0.51
GTF3C1-208ENST00000567843 CADPS2Q86UW7 1296 aa18.24■□□□□ 0.51
GTF3C1-208ENST00000567843 SETBP1Q9Y6X0 1596 aa18.24■□□□□ 0.51
GTF3C1-208ENST00000567843 NCOA3Q9Y6Q9 1424 aa18.23■□□□□ 0.51
GTF3C1-208ENST00000567843 KIF1BO60333 1816 aa18.23■□□□□ 0.51
GTF3C1-208ENST00000567843 VGFO15240 615 aaPredicted RBP18.22■□□□□ 0.51
GTF3C1-208ENST00000567843 RGS17Q9UGC6 210 aaPredicted RBP18.22■□□□□ 0.51
GTF3C1-208ENST00000567843 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.2■□□□□ 0.5
GTF3C1-208ENST00000567843 RPGRIP1LQ68CZ1 1315 aa18.19■□□□□ 0.5
GTF3C1-208ENST00000567843 XRN1Q8IZH2 1706 aaKnown RBP18.18■□□□□ 0.5
GTF3C1-208ENST00000567843 BRINP3Q76B58 766 aa18.18■□□□□ 0.5
GTF3C1-208ENST00000567843 CCDC144AA2RUR9 1427 aa18.17■□□□□ 0.5
GTF3C1-208ENST00000567843 SETD5Q9C0A6 1442 aa18.17■□□□□ 0.5
GTF3C1-208ENST00000567843 PHLPP1O60346 1717 aa18.17■□□□□ 0.5
GTF3C1-208ENST00000567843 ADGRF5Q8IZF2 1346 aa18.17■□□□□ 0.5
GTF3C1-208ENST00000567843 JCADQ9P266 1359 aa18.16■□□□□ 0.5
GTF3C1-208ENST00000567843 DDX17Q92841 729 aaKnown RBP18.15■□□□□ 0.5
GTF3C1-208ENST00000567843 ROBO2Q9HCK4 1378 aa18.15■□□□□ 0.5
GTF3C1-208ENST00000567843 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
GTF3C1-208ENST00000567843 STK26Q9P289 416 aa18.13■□□□□ 0.49
GTF3C1-208ENST00000567843 RAB3GAP2Q9H2M9 1393 aa18.13■□□□□ 0.49
GTF3C1-208ENST00000567843 MST1RQ04912 1400 aa18.13■□□□□ 0.49
GTF3C1-208ENST00000567843 ADGRL3Q9HAR2 1447 aa18.12■□□□□ 0.49
GTF3C1-208ENST00000567843 DCCP43146 1447 aa18.11■□□□□ 0.49
GTF3C1-208ENST00000567843 SPATA31E1Q6ZUB1 1445 aa18.11■□□□□ 0.49
GTF3C1-208ENST00000567843 COL16A1Q07092 1604 aaPredicted RBP18.11■□□□□ 0.49
GTF3C1-208ENST00000567843 NUTM2BA6NNL0 878 aaPredicted RBP18.1■□□□□ 0.49
GTF3C1-208ENST00000567843 NUTM2EB1AL46 878 aaPredicted RBP18.1■□□□□ 0.49
GTF3C1-208ENST00000567843 TMEM132EQ6IEE7 984 aa18.1■□□□□ 0.49
GTF3C1-208ENST00000567843 NUTM2AQ8IVF1 878 aaPredicted RBP18.1■□□□□ 0.49
GTF3C1-208ENST00000567843 PPLO60437 1756 aa18.09■□□□□ 0.49
GTF3C1-208ENST00000567843 MEX3CQ5U5Q3 659 aaKnown RBP18.09■□□□□ 0.49
GTF3C1-208ENST00000567843 SETD1AO15047 1707 aaKnown RBP18.08■□□□□ 0.48
GTF3C1-208ENST00000567843 ASXL1Q8IXJ9 1541 aa18.08■□□□□ 0.48
GTF3C1-208ENST00000567843 WAPLQ7Z5K2 1190 aa18.07■□□□□ 0.48
GTF3C1-208ENST00000567843 ORAI2Q96SN7 254 aa18.07■□□□□ 0.48
GTF3C1-208ENST00000567843 AHDC1Q5TGY3 1603 aaPredicted RBP18.07■□□□□ 0.48
GTF3C1-208ENST00000567843 PTCH1Q13635 1447 aa18.06■□□□□ 0.48
GTF3C1-208ENST00000567843 NALCNQ8IZF0 1738 aa18.06■□□□□ 0.48
GTF3C1-208ENST00000567843 LRP6O75581 1613 aa18.06■□□□□ 0.48
GTF3C1-208ENST00000567843 ANKRD30BQ9BXX2 1392 aa18.05■□□□□ 0.48
GTF3C1-208ENST00000567843 SPATA31A6Q5VVP1 1343 aa18.04■□□□□ 0.48
GTF3C1-208ENST00000567843 C1orf167Q5SNV9 1468 aa18.04■□□□□ 0.48
GTF3C1-208ENST00000567843 NUTM2FA1L443 756 aa18.04■□□□□ 0.48
GTF3C1-208ENST00000567843 LRRC59Q96AG4 307 aaKnown RBP18.02■□□□□ 0.48
GTF3C1-208ENST00000567843 PLEKHH1Q9ULM0 1364 aa18.02■□□□□ 0.47
GTF3C1-208ENST00000567843 ACIN1Q9UKV3 1341 aaKnown RBP18.01■□□□□ 0.47
GTF3C1-208ENST00000567843 CFAP70Q5T0N1 1121 aa18.01■□□□□ 0.47
GTF3C1-208ENST00000567843 PIK3C2GO75747 1445 aa18■□□□□ 0.47
GTF3C1-208ENST00000567843 LRPPRCP42704 1394 aaKnown RBP18■□□□□ 0.47
GTF3C1-208ENST00000567843 ESCO1Q5FWF5 840 aa17.99■□□□□ 0.47
GTF3C1-208ENST00000567843 C14orf93Q9H972 538 aaKnown RBP17.98■□□□□ 0.47
GTF3C1-208ENST00000567843 KDM2AQ9Y2K7 1162 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 167.4 ms