RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.85□□□□□ -0.83
CAPN3-217ENST00000567817 METTL3Q86U44 580 aaKnown RBP9.85□□□□□ -0.83
CAPN3-217ENST00000567817 RCCD1A6NED2 376 aa9.84□□□□□ -0.83
CAPN3-217ENST00000567817 ZC3H15Q8WU90 426 aaKnown RBP9.84□□□□□ -0.83
CAPN3-217ENST00000567817 TSR3Q9UJK0 312 aaKnown RBP9.84□□□□□ -0.83
CAPN3-217ENST00000567817 SWT1Q5T5J6 900 aaKnown RBP9.83□□□□□ -0.84
CAPN3-217ENST00000567817 NYAP1Q6ZVC0 841 aa9.83□□□□□ -0.84
CAPN3-217ENST00000567817 TMEM134Q9H6X4 195 aa9.83□□□□□ -0.84
CAPN3-217ENST00000567817 HPS5Q9UPZ3 1129 aa9.83□□□□□ -0.84
CAPN3-217ENST00000567817 MINK1Q8N4C8 1332 aaPredicted RBP9.82□□□□□ -0.84
CAPN3-217ENST00000567817 SLC4A3P48751 1232 aa9.82□□□□□ -0.84
CAPN3-217ENST00000567817 SLF2Q8IX21 1173 aa9.82□□□□□ -0.84
CAPN3-217ENST00000567817 ZMYND10O75800 440 aa9.81□□□□□ -0.84
CAPN3-217ENST00000567817 NECTIN2Q92692 538 aa9.81□□□□□ -0.84
CAPN3-217ENST00000567817 IRF6O14896 467 aa9.8□□□□□ -0.84
CAPN3-217ENST00000567817 WBP1LQ9NX94 342 aa9.8□□□□□ -0.84
CAPN3-217ENST00000567817 RNF40O75150 1001 aa9.79□□□□□ -0.84
CAPN3-217ENST00000567817 PPP4CP60510 307 aa9.79□□□□□ -0.84
CAPN3-217ENST00000567817 BARGINQ6ZT62 677 aa9.79□□□□□ -0.84
CAPN3-217ENST00000567817 CUX2O14529 1486 aa9.79□□□□□ -0.84
CAPN3-217ENST00000567817 CCDC102AQ96A19 550 aa9.78□□□□□ -0.84
CAPN3-217ENST00000567817 PHOX2BQ99453 314 aa9.76□□□□□ -0.85
CAPN3-217ENST00000567817 KRI1Q8N9T8 703 aaKnown RBP9.75□□□□□ -0.85
CAPN3-217ENST00000567817 DAXXQ9UER7 740 aaPredicted RBP9.74□□□□□ -0.85
CAPN3-217ENST00000567817 DCAF1Q9Y4B6 1507 aa9.73□□□□□ -0.85
CAPN3-217ENST00000567817 PRR14Q9BWN1 585 aa9.72□□□□□ -0.85
CAPN3-217ENST00000567817 NLRP7Q8WX94 980 aa9.71□□□□□ -0.86
CAPN3-217ENST00000567817 RSPH4AQ5TD94 716 aa9.7□□□□□ -0.86
CAPN3-217ENST00000567817 SULF1Q8IWU6 871 aa9.7□□□□□ -0.86
CAPN3-217ENST00000567817 PLA2G2EQ9NZK7 142 aa9.7□□□□□ -0.86
CAPN3-217ENST00000567817 ITGBL1O95965 494 aaPredicted RBP9.69□□□□□ -0.86
CAPN3-217ENST00000567817 APLP1P51693 650 aa9.69□□□□□ -0.86
CAPN3-217ENST00000567817 SLC10A3P09131 477 aa9.68□□□□□ -0.86
CAPN3-217ENST00000567817 KMT5BQ4FZB7 885 aa9.68□□□□□ -0.86
CAPN3-217ENST00000567817 CFHP08603 1231 aa9.67□□□□□ -0.86
CAPN3-217ENST00000567817 CLCN1P35523 988 aa9.67□□□□□ -0.86
CAPN3-217ENST00000567817 MDM2Q00987 491 aaPredicted RBP9.67□□□□□ -0.86
CAPN3-217ENST00000567817 IFFO2Q5TF58 517 aa9.67□□□□□ -0.86
CAPN3-217ENST00000567817 DDX11L8A8MPP1 907 aa9.66□□□□□ -0.86
CAPN3-217ENST00000567817 AMHR2Q16671 573 aa9.66□□□□□ -0.86
CAPN3-217ENST00000567817 AK7Q96M32 723 aa9.66□□□□□ -0.86
CAPN3-217ENST00000567817 GPCPD1Q9NPB8 672 aa9.66□□□□□ -0.86
CAPN3-217ENST00000567817 RDH13Q8NBN7 331 aa9.65□□□□□ -0.86
CAPN3-217ENST00000567817 ACTN4O43707 911 aaKnown RBP9.64□□□□□ -0.87
CAPN3-217ENST00000567817 TMUB1Q9BVT8 246 aa9.64□□□□□ -0.87
CAPN3-217ENST00000567817 KCNC4Q03721 635 aa9.63□□□□□ -0.87
CAPN3-217ENST00000567817 MTRQ99707 1265 aa9.63□□□□□ -0.87
CAPN3-217ENST00000567817 SLC24A3Q9HC58 644 aa9.63□□□□□ -0.87
CAPN3-217ENST00000567817 SCRIBQ14160 1630 aa9.63□□□□□ -0.87
CAPN3-217ENST00000567817 TRIM66O15016 1216 aa9.62□□□□□ -0.87
CAPN3-217ENST00000567817 TJAP1Q5JTD0 557 aa9.62□□□□□ -0.87
CAPN3-217ENST00000567817 IL21Q9HBE4 155 aa9.62□□□□□ -0.87
CAPN3-217ENST00000567817 PCDHB3Q9Y5E6 796 aa9.62□□□□□ -0.87
CAPN3-217ENST00000567817 ZCCHC6Q5VYS8 1495 aaKnown RBP9.61□□□□□ -0.87
CAPN3-217ENST00000567817 CD46P15529 392 aa9.61□□□□□ -0.87
CAPN3-217ENST00000567817 TTLL12Q14166 644 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-217ENST00000567817 FAM217BQ9NTX9 383 aaPredicted RBP9.61□□□□□ -0.87
CAPN3-217ENST00000567817 GCGRP47871 477 aa9.6□□□□□ -0.87
CAPN3-217ENST00000567817 ERCC6Q03468 1493 aa9.59□□□□□ -0.87
CAPN3-217ENST00000567817 REPIN1Q9BWE0 567 aaKnown RBP9.58□□□□□ -0.88
CAPN3-217ENST00000567817 COPS2P61201 443 aa9.57□□□□□ -0.88
CAPN3-217ENST00000567817 BLOC1S3Q6QNY0 202 aa9.57□□□□□ -0.88
CAPN3-217ENST00000567817 PARP9Q8IXQ6 854 aa9.57□□□□□ -0.88
CAPN3-217ENST00000567817 GIGYF2Q6Y7W6 1299 aaKnown RBP9.56□□□□□ -0.88
CAPN3-217ENST00000567817 A0A0G2JS52 829 aa9.55□□□□□ -0.88
CAPN3-217ENST00000567817 PDE4DQ08499 809 aa9.55□□□□□ -0.88
CAPN3-217ENST00000567817 FUT2Q10981 343 aa9.55□□□□□ -0.88
CAPN3-217ENST00000567817 ZPR1O75312 459 aa9.54□□□□□ -0.88
CAPN3-217ENST00000567817 NR1I2O75469 434 aa9.54□□□□□ -0.88
CAPN3-217ENST00000567817 SSTR3P32745 418 aaPredicted RBP9.54□□□□□ -0.88
CAPN3-217ENST00000567817 ATP6V1AP38606 617 aa9.54□□□□□ -0.88
CAPN3-217ENST00000567817 ZNF516Q92618 1163 aa9.54□□□□□ -0.88
CAPN3-217ENST00000567817 GRIPAP1Q4V328 841 aa9.53□□□□□ -0.88
CAPN3-217ENST00000567817 KDM4AO75164 1064 aa9.52□□□□□ -0.89
CAPN3-217ENST00000567817 USP46P62068 366 aa9.52□□□□□ -0.89
CAPN3-217ENST00000567817 PUS10Q3MIT2 529 aaKnown RBP9.52□□□□□ -0.89
CAPN3-217ENST00000567817 MORN1Q5T089 497 aa9.52□□□□□ -0.89
CAPN3-217ENST00000567817 NUTM1Q86Y26 1132 aa9.49□□□□□ -0.89
CAPN3-217ENST00000567817 SCUBE3Q8IX30 993 aa9.49□□□□□ -0.89
CAPN3-217ENST00000567817 TLL1O43897 1013 aa9.48□□□□□ -0.89
CAPN3-217ENST00000567817 MS4A1P11836 297 aa9.48□□□□□ -0.89
CAPN3-217ENST00000567817 TPRNQ4KMQ1 711 aa9.48□□□□□ -0.89
CAPN3-217ENST00000567817 HOXA2O43364 376 aa9.47□□□□□ -0.89
CAPN3-217ENST00000567817 ADH1BP00325 375 aa9.47□□□□□ -0.89
CAPN3-217ENST00000567817 NKX2-3Q8TAU0 364 aa9.47□□□□□ -0.89
CAPN3-217ENST00000567817 BEGAINQ9BUH8 593 aa9.47□□□□□ -0.89
CAPN3-217ENST00000567817 SLC27A5Q9Y2P5 690 aa9.47□□□□□ -0.89
CAPN3-217ENST00000567817 SALL2Q9Y467 1007 aaPredicted RBP9.47□□□□□ -0.89
CAPN3-217ENST00000567817 RGS20O76081 388 aa9.46□□□□□ -0.9
CAPN3-217ENST00000567817 GGCXP38435 758 aa9.45□□□□□ -0.9
CAPN3-217ENST00000567817 DIXDC1Q155Q3 683 aa9.45□□□□□ -0.9
CAPN3-217ENST00000567817 NCAPD3P42695 1498 aa9.45□□□□□ -0.9
CAPN3-217ENST00000567817 FMNL1O95466 1100 aaPredicted RBP9.44□□□□□ -0.9
CAPN3-217ENST00000567817 Q3C1V9 767 aa9.44□□□□□ -0.9
CAPN3-217ENST00000567817 PPP1R18Q6NYC8 613 aa9.44□□□□□ -0.9
CAPN3-217ENST00000567817 SPIRE2Q8WWL2 714 aa9.44□□□□□ -0.9
CAPN3-217ENST00000567817 THAP11Q96EK4 314 aa9.44□□□□□ -0.9
CAPN3-217ENST00000567817 SPSB2Q99619 263 aa9.44□□□□□ -0.9
CAPN3-217ENST00000567817 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.43□□□□□ -0.9
CAPN3-217ENST00000567817 BRICD5Q6PL45 260 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms