RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 POTEGQ6S5H5 508 aa10.56□□□□□ -0.72
SHCBP1-206ENST00000567698 POTEMA6NI47 508 aa10.54□□□□□ -0.72
SHCBP1-206ENST00000567698 LAPTM4BQ86VI4 370 aa10.54□□□□□ -0.72
SHCBP1-206ENST00000567698 DDRGK1Q96HY6 314 aa10.54□□□□□ -0.72
SHCBP1-206ENST00000567698 CD46P15529 392 aa10.53□□□□□ -0.72
SHCBP1-206ENST00000567698 SWT1Q5T5J6 900 aaKnown RBP10.53□□□□□ -0.72
SHCBP1-206ENST00000567698 ANKRD13DQ6ZTN6 518 aa10.52□□□□□ -0.73
SHCBP1-206ENST00000567698 NBPF3Q9H094 633 aa10.52□□□□□ -0.73
SHCBP1-206ENST00000567698 SLC10A3P09131 477 aa10.51□□□□□ -0.73
SHCBP1-206ENST00000567698 BEGAINQ9BUH8 593 aa10.51□□□□□ -0.73
SHCBP1-206ENST00000567698 ZFRQ96KR1 1074 aaKnown RBP10.5□□□□□ -0.73
SHCBP1-206ENST00000567698 SAMD7Q7Z3H4 446 aa10.49□□□□□ -0.73
SHCBP1-206ENST00000567698 CDAN1Q8IWY9 1227 aa10.49□□□□□ -0.73
SHCBP1-206ENST00000567698 DDX11L8A8MPP1 907 aa10.48□□□□□ -0.73
SHCBP1-206ENST00000567698 MRPL50Q8N5N7 158 aaKnown RBP10.47□□□□□ -0.73
SHCBP1-206ENST00000567698 SULF1Q8IWU6 871 aa10.45□□□□□ -0.74
SHCBP1-206ENST00000567698 GOPCQ9HD26 462 aa10.45□□□□□ -0.74
SHCBP1-206ENST00000567698 SH3D19Q5HYK7 790 aa10.44□□□□□ -0.74
SHCBP1-206ENST00000567698 SPIRE2Q8WWL2 714 aa10.44□□□□□ -0.74
SHCBP1-206ENST00000567698 MYSM1Q5VVJ2 828 aa10.43□□□□□ -0.74
SHCBP1-206ENST00000567698 TBC1D2Q9BYX2 928 aa10.43□□□□□ -0.74
SHCBP1-206ENST00000567698 GCGRP47871 477 aa10.42□□□□□ -0.74
SHCBP1-206ENST00000567698 SLF2Q8IX21 1173 aa10.4□□□□□ -0.74
SHCBP1-206ENST00000567698 RDH13Q8NBN7 331 aa10.4□□□□□ -0.74
SHCBP1-206ENST00000567698 SOWAHBA6NEL2 793 aa10.39□□□□□ -0.75
SHCBP1-206ENST00000567698 FBXO31Q5XUX0 539 aaPredicted RBP10.39□□□□□ -0.75
SHCBP1-206ENST00000567698 GTF3C3Q9Y5Q9 886 aa10.39□□□□□ -0.75
SHCBP1-206ENST00000567698 BCAMP50895 628 aa10.38□□□□□ -0.75
SHCBP1-206ENST00000567698 SKIV2LQ15477 1246 aaKnown RBP10.38□□□□□ -0.75
SHCBP1-206ENST00000567698 PROCA1Q8NCQ7 364 aaPredicted RBP10.38□□□□□ -0.75
SHCBP1-206ENST00000567698 LRCH3Q96II8 777 aa10.38□□□□□ -0.75
SHCBP1-206ENST00000567698 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.38□□□□□ -0.75
SHCBP1-206ENST00000567698 LIMD1Q9UGP4 676 aa10.38□□□□□ -0.75
SHCBP1-206ENST00000567698 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.37□□□□□ -0.75
SHCBP1-206ENST00000567698 MOXD2PA6NHM9 499 aa10.36□□□□□ -0.75
SHCBP1-206ENST00000567698 KDM4AO75164 1064 aa10.36□□□□□ -0.75
SHCBP1-206ENST00000567698 CFHP08603 1231 aa10.36□□□□□ -0.75
SHCBP1-206ENST00000567698 ANKK1Q8NFD2 765 aa10.36□□□□□ -0.75
SHCBP1-206ENST00000567698 WNT2BQ93097 391 aa10.36□□□□□ -0.75
SHCBP1-206ENST00000567698 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
SHCBP1-206ENST00000567698 SPTLC1O15269 473 aa10.35□□□□□ -0.75
SHCBP1-206ENST00000567698 HOXA2O43364 376 aa10.35□□□□□ -0.75
SHCBP1-206ENST00000567698 HDGFP51858 240 aaKnown RBP10.35□□□□□ -0.75
SHCBP1-206ENST00000567698 RSBN1LQ6PCB5 846 aaPredicted RBP10.35□□□□□ -0.75
SHCBP1-206ENST00000567698 POLR3EQ9NVU0 708 aa10.35□□□□□ -0.75
SHCBP1-206ENST00000567698 NDUFV2P19404 249 aa10.34□□□□□ -0.75
SHCBP1-206ENST00000567698 HLA-CQ95604 372 aa10.34□□□□□ -0.75
SHCBP1-206ENST00000567698 CLK2P49760 499 aaKnown RBP10.33□□□□□ -0.76
SHCBP1-206ENST00000567698 DIXDC1Q155Q3 683 aa10.33□□□□□ -0.76
SHCBP1-206ENST00000567698 THSD4Q6ZMP0 1018 aa10.33□□□□□ -0.76
SHCBP1-206ENST00000567698 HPS5Q9UPZ3 1129 aa10.33□□□□□ -0.76
SHCBP1-206ENST00000567698 GOLGA8CPA6NN73 597 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 RNF40O75150 1001 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 GJA5P36382 358 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 USP46P62068 366 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 FUT2Q10981 343 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 TUSC1Q2TAM9 212 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 RSPH4AQ5TD94 716 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 RIC3Q7Z5B4 369 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 NUTM1Q86Y26 1132 aa10.32□□□□□ -0.76
SHCBP1-206ENST00000567698 APLP1P51693 650 aa10.31□□□□□ -0.76
SHCBP1-206ENST00000567698 GUCA2AQ02747 115 aa10.31□□□□□ -0.76
SHCBP1-206ENST00000567698 STAC3Q96MF2 364 aa10.31□□□□□ -0.76
SHCBP1-206ENST00000567698 TSR3Q9UJK0 312 aaKnown RBP10.31□□□□□ -0.76
SHCBP1-206ENST00000567698 PCDHGC3Q9UN70 934 aa10.31□□□□□ -0.76
SHCBP1-206ENST00000567698 PCDHB15Q9Y5E8 787 aa10.31□□□□□ -0.76
SHCBP1-206ENST00000567698 ACTN4O43707 911 aaKnown RBP10.3□□□□□ -0.76
SHCBP1-206ENST00000567698 PCMTD1Q96MG8 357 aaPredicted RBP10.3□□□□□ -0.76
SHCBP1-206ENST00000567698 WBP1LQ9NX94 342 aa10.3□□□□□ -0.76
SHCBP1-206ENST00000567698 KCTD12Q96CX2 325 aaKnown RBP10.29□□□□□ -0.76
SHCBP1-206ENST00000567698 SLC4A3P48751 1232 aa10.28□□□□□ -0.76
SHCBP1-206ENST00000567698 PPP4CP60510 307 aa10.27□□□□□ -0.77
SHCBP1-206ENST00000567698 QPCTQ16769 361 aa10.27□□□□□ -0.77
SHCBP1-206ENST00000567698 MORN1Q5T089 497 aa10.27□□□□□ -0.77
SHCBP1-206ENST00000567698 PPP2R2DQ66LE6 453 aa10.27□□□□□ -0.77
SHCBP1-206ENST00000567698 PCDH10Q9P2E7 1040 aa10.27□□□□□ -0.77
SHCBP1-206ENST00000567698 LILRB3O75022 631 aa10.26□□□□□ -0.77
SHCBP1-206ENST00000567698 ATP6V1AP38606 617 aa10.26□□□□□ -0.77
SHCBP1-206ENST00000567698 KMT5BQ4FZB7 885 aa10.26□□□□□ -0.77
SHCBP1-206ENST00000567698 FDX1P10109 184 aa10.25□□□□□ -0.77
SHCBP1-206ENST00000567698 PUS10Q3MIT2 529 aaKnown RBP10.25□□□□□ -0.77
SHCBP1-206ENST00000567698 SPNS2Q8IVW8 549 aa10.25□□□□□ -0.77
SHCBP1-206ENST00000567698 NECTIN2Q92692 538 aa10.25□□□□□ -0.77
SHCBP1-206ENST00000567698 MYT1LQ9UL68 1186 aa10.24□□□□□ -0.77
SHCBP1-206ENST00000567698 RTL5Q5HYW3 569 aaPredicted RBP10.23□□□□□ -0.77
SHCBP1-206ENST00000567698 CABLES1Q8TDN4 633 aa10.23□□□□□ -0.77
SHCBP1-206ENST00000567698 PRPF38BQ5VTL8 546 aaKnown RBP10.22□□□□□ -0.77
SHCBP1-206ENST00000567698 SLC27A5Q9Y2P5 690 aa10.22□□□□□ -0.77
SHCBP1-206ENST00000567698 HRCP23327 699 aa10.21□□□□□ -0.77
SHCBP1-206ENST00000567698 RFC5P40937 340 aa10.21□□□□□ -0.77
SHCBP1-206ENST00000567698 CSPP1Q1MSJ5 1256 aa10.21□□□□□ -0.77
SHCBP1-206ENST00000567698 TIMELESSQ9UNS1 1208 aa10.21□□□□□ -0.77
SHCBP1-206ENST00000567698 PRR14Q9BWN1 585 aa10.2□□□□□ -0.78
SHCBP1-206ENST00000567698 GRIPAP1Q4V328 841 aa10.19□□□□□ -0.78
SHCBP1-206ENST00000567698 BLOC1S3Q6QNY0 202 aa10.19□□□□□ -0.78
SHCBP1-206ENST00000567698 SYMPKQ92797 1274 aaKnown RBP10.19□□□□□ -0.78
SHCBP1-206ENST00000567698 THAP11Q96EK4 314 aa10.19□□□□□ -0.78
SHCBP1-206ENST00000567698 PCDHB3Q9Y5E6 796 aa10.18□□□□□ -0.78
SHCBP1-206ENST00000567698 PTPN5P54829 565 aa10.17□□□□□ -0.78
SHCBP1-206ENST00000567698 RNF19BQ6ZMZ0 732 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms