RNA–Protein interactions for RNA: ENST00000567479.1

KIFC3-231, Transcript of kinesin family member C3, human

TSL 4

Gene KIFC3, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
KIFC3-231	ENST00000567479	RIMS2	Q9UQ26	1411 aa		14.15	□□□□□ -0.14
KIFC3-231	ENST00000567479	HSPA1L	P34931	641 aa		14.14	□□□□□ -0.15
KIFC3-231	ENST00000567479	NUTM2D	Q5VT03	806 aa	Predicted RBP	14.14	□□□□□ -0.15
KIFC3-231	ENST00000567479	GCC2	Q8IWJ2	1684 aa		14.14	□□□□□ -0.15
KIFC3-231	ENST00000567479	PROSER2	Q86WR7	435 aa	Predicted RBP	14.13	□□□□□ -0.15
KIFC3-231	ENST00000567479		E9PCH4	1651 aa		14.13	□□□□□ -0.15
KIFC3-231	ENST00000567479	DISP3	Q9P2K9	1392 aa		14.12	□□□□□ -0.15
KIFC3-231	ENST00000567479	PLEKHG1	Q9ULL1	1385 aa		14.12	□□□□□ -0.15
KIFC3-231	ENST00000567479	TBX22	Q9Y458	520 aa		14.12	□□□□□ -0.15
KIFC3-231	ENST00000567479	ZFYVE9	O95405	1425 aa		14.12	□□□□□ -0.15
KIFC3-231	ENST00000567479	HFM1	A2PYH4	1435 aa		14.1	□□□□□ -0.15
KIFC3-231	ENST00000567479	STRCP1	A6NGW2	1772 aa		14.1	□□□□□ -0.15
KIFC3-231	ENST00000567479	ZNF326	Q5BKZ1	582 aa	Known RBP	14.1	□□□□□ -0.15
KIFC3-231	ENST00000567479	TMEM131L	A2VDJ0	1609 aa		14.1	□□□□□ -0.15
KIFC3-231	ENST00000567479	TMEM94	Q12767	1356 aa		14.09	□□□□□ -0.15
KIFC3-231	ENST00000567479	RBM33	Q96EV2	1170 aa	Known RBP	14.09	□□□□□ -0.15
KIFC3-231	ENST00000567479	SLC4A1AP	Q9BWU0	796 aa	Known RBP	14.09	□□□□□ -0.15
KIFC3-231	ENST00000567479	ALK	Q9UM73	1620 aa		14.04	□□□□□ -0.16
KIFC3-231	ENST00000567479	AMOTL2	Q9Y2J4	779 aa		14.03	□□□□□ -0.16
KIFC3-231	ENST00000567479	ADAMTS13	Q76LX8	1427 aa		14.03	□□□□□ -0.16
KIFC3-231	ENST00000567479	MYO5B	Q9ULV0	1848 aa		14.02	□□□□□ -0.16
KIFC3-231	ENST00000567479	NKTR	P30414	1462 aa	Known RBP	14.02	□□□□□ -0.16
KIFC3-231	ENST00000567479	MSH6	P52701	1360 aa		14.02	□□□□□ -0.17
KIFC3-231	ENST00000567479	PIK3R4	Q99570	1358 aa		14.02	□□□□□ -0.17
KIFC3-231	ENST00000567479	C14orf37	Q86TY3	774 aa		14.02	□□□□□ -0.17
KIFC3-231	ENST00000567479	FOXD1	Q16676	465 aa		14.01	□□□□□ -0.17
KIFC3-231	ENST00000567479	ILDR2	Q71H61	639 aa		14.01	□□□□□ -0.17
KIFC3-231	ENST00000567479	MPHOSPH9	Q99550	1183 aa		14.01	□□□□□ -0.17
KIFC3-231	ENST00000567479	SLAIN2	Q9P270	581 aa		14.01	□□□□□ -0.17
KIFC3-231	ENST00000567479	FAM135B	Q49AJ0	1406 aa		14	□□□□□ -0.17
KIFC3-231	ENST00000567479	ACIN1	Q9UKV3	1341 aa	Known RBP	14	□□□□□ -0.17
KIFC3-231	ENST00000567479	VGF	O15240	615 aa	Predicted RBP	14	□□□□□ -0.17
KIFC3-231	ENST00000567479	SPHKAP	Q2M3C7	1700 aa		14	□□□□□ -0.17
KIFC3-231	ENST00000567479	RPGRIP1L	Q68CZ1	1315 aa		13.99	□□□□□ -0.17
KIFC3-231	ENST00000567479	C19orf44	Q9H6X5	657 aa		13.99	□□□□□ -0.17
KIFC3-231	ENST00000567479	NWD1	Q149M9	1564 aa		13.99	□□□□□ -0.17
KIFC3-231	ENST00000567479	TRPM2	O94759	1503 aa		13.99	□□□□□ -0.17
KIFC3-231	ENST00000567479	NCOA3	Q9Y6Q9	1424 aa		13.98	□□□□□ -0.17
KIFC3-231	ENST00000567479	XIRP1	Q702N8	1843 aa	Known RBP	13.97	□□□□□ -0.17
KIFC3-231	ENST00000567479	DIP2A	Q14689	1571 aa		13.97	□□□□□ -0.17
KIFC3-231	ENST00000567479	ATF3	P18847	181 aa		13.97	□□□□□ -0.17
KIFC3-231	ENST00000567479	CLTCL1	P53675	1640 aa		13.97	□□□□□ -0.17
KIFC3-231	ENST00000567479	CHD2	O14647	1828 aa	Known RBP	13.97	□□□□□ -0.17
KIFC3-231	ENST00000567479	CADPS2	Q86UW7	1296 aa		13.96	□□□□□ -0.17
KIFC3-231	ENST00000567479	PTPRU	Q92729	1446 aa		13.96	□□□□□ -0.18
KIFC3-231	ENST00000567479	SETD5	Q9C0A6	1442 aa		13.96	□□□□□ -0.18
KIFC3-231	ENST00000567479	MET	P08581	1390 aa		13.95	□□□□□ -0.18
KIFC3-231	ENST00000567479	RGL3	Q3MIN7	710 aa		13.94	□□□□□ -0.18
KIFC3-231	ENST00000567479	PHF23	Q9BUL5	403 aa	Predicted RBP	13.94	□□□□□ -0.18
KIFC3-231	ENST00000567479	SETBP1	Q9Y6X0	1596 aa		13.93	□□□□□ -0.18
KIFC3-231	ENST00000567479	CCDC144A	A2RUR9	1427 aa		13.92	□□□□□ -0.18
KIFC3-231	ENST00000567479	NEXMIF	Q5QGS0	1516 aa		13.92	□□□□□ -0.18
KIFC3-231	ENST00000567479	SOCS7	O14512	581 aa		13.91	□□□□□ -0.18
KIFC3-231	ENST00000567479	KIF1B	O60333	1816 aa		13.9	□□□□□ -0.18
KIFC3-231	ENST00000567479	MED1	Q15648	1581 aa	Predicted RBP	13.89	□□□□□ -0.19
KIFC3-231	ENST00000567479	RAB3GAP2	Q9H2M9	1393 aa		13.89	□□□□□ -0.19
KIFC3-231	ENST00000567479	NRXN3	Q9Y4C0	1643 aa		13.89	□□□□□ -0.19
KIFC3-231	ENST00000567479	ROBO1	Q9Y6N7	1651 aa		13.88	□□□□□ -0.19
KIFC3-231	ENST00000567479	ADGRF5	Q8IZF2	1346 aa		13.88	□□□□□ -0.19
KIFC3-231	ENST00000567479	HRC	P23327	699 aa		13.86	□□□□□ -0.19
KIFC3-231	ENST00000567479	BRINP3	Q76B58	766 aa		13.86	□□□□□ -0.19
KIFC3-231	ENST00000567479	ANKRD30B	Q9BXX2	1392 aa		13.85	□□□□□ -0.19
KIFC3-231	ENST00000567479	DCC	P43146	1447 aa		13.85	□□□□□ -0.19
KIFC3-231	ENST00000567479	SPATA31E1	Q6ZUB1	1445 aa		13.85	□□□□□ -0.19
KIFC3-231	ENST00000567479	JCAD	Q9P266	1359 aa		13.84	□□□□□ -0.19
KIFC3-231	ENST00000567479	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.84	□□□□□ -0.19
KIFC3-231	ENST00000567479	XRN1	Q8IZH2	1706 aa	Known RBP	13.84	□□□□□ -0.19
KIFC3-231	ENST00000567479	STK26	Q9P289	416 aa		13.83	□□□□□ -0.2
KIFC3-231	ENST00000567479	ROBO2	Q9HCK4	1378 aa		13.83	□□□□□ -0.2
KIFC3-231	ENST00000567479	RGS17	Q9UGC6	210 aa	Predicted RBP	13.82	□□□□□ -0.2
KIFC3-231	ENST00000567479	ADGRL3	Q9HAR2	1447 aa		13.81	□□□□□ -0.2
KIFC3-231	ENST00000567479	TMEM132E	Q6IEE7	984 aa		13.81	□□□□□ -0.2
KIFC3-231	ENST00000567479	MST1R	Q04912	1400 aa		13.81	□□□□□ -0.2
KIFC3-231	ENST00000567479	PTCH1	Q13635	1447 aa		13.81	□□□□□ -0.2
KIFC3-231	ENST00000567479	PHLPP1	O60346	1717 aa		13.79	□□□□□ -0.2
KIFC3-231	ENST00000567479	PPL	O60437	1756 aa		13.79	□□□□□ -0.2
KIFC3-231	ENST00000567479	LRRC59	Q96AG4	307 aa	Known RBP	13.79	□□□□□ -0.2
KIFC3-231	ENST00000567479	C14orf93	Q9H972	538 aa	Known RBP	13.79	□□□□□ -0.2
KIFC3-231	ENST00000567479	SPATA31A6	Q5VVP1	1343 aa		13.79	□□□□□ -0.2
KIFC3-231	ENST00000567479	WAPL	Q7Z5K2	1190 aa		13.78	□□□□□ -0.2
KIFC3-231	ENST00000567479	LRPPRC	P42704	1394 aa	Known RBP	13.77	□□□□□ -0.21
KIFC3-231	ENST00000567479	CFAP70	Q5T0N1	1121 aa		13.77	□□□□□ -0.21
KIFC3-231	ENST00000567479	PRAG1	Q86YV5	1406 aa		13.77	□□□□□ -0.21
KIFC3-231	ENST00000567479	DDX17	Q92841	729 aa	Known RBP	13.77	□□□□□ -0.21
KIFC3-231	ENST00000567479	ABCC11	Q96J66	1382 aa		13.77	□□□□□ -0.21
KIFC3-231	ENST00000567479	ORAI2	Q96SN7	254 aa		13.77	□□□□□ -0.21
KIFC3-231	ENST00000567479	PIK3C2G	O75747	1445 aa		13.76	□□□□□ -0.21
KIFC3-231	ENST00000567479	MEX3C	Q5U5Q3	659 aa	Known RBP	13.76	□□□□□ -0.21
KIFC3-231	ENST00000567479	SIRT1	Q96EB6	747 aa		13.76	□□□□□ -0.21
KIFC3-231	ENST00000567479	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	ASXL1	Q8IXJ9	1541 aa		13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	C1orf167	Q5SNV9	1468 aa		13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	NUTM2E	B1AL46	878 aa	Predicted RBP	13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	POTEA	Q6S8J7	498 aa		13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	DCAF11	Q8TEB1	546 aa		13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	KDM2A	Q9Y2K7	1162 aa		13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	SETD1A	O15047	1707 aa	Known RBP	13.75	□□□□□ -0.21
KIFC3-231	ENST00000567479	COL16A1	Q07092	1604 aa	Predicted RBP	13.75	□□□□□ -0.21

Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms