RNA–Protein interactions for RNA: ENST00000567143.1

GINS3-206, Transcript of GINS complex subunit 3, humanhuman

Gene GINS3, Length 3,202 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-206ENST00000567143 CCDC7Q96M83 1385 aa8.77□□□□□ -1.01
GINS3-206ENST00000567143 PTPRTO14522 1441 aa8.77□□□□□ -1.01
GINS3-206ENST00000567143 ANKRD50Q9ULJ7 1429 aa8.77□□□□□ -1.01
GINS3-206ENST00000567143 TMC1Q8TDI8 760 aa8.77□□□□□ -1.01
GINS3-206ENST00000567143 ERVK-7P63135 1459 aa8.76□□□□□ -1.01
GINS3-206ENST00000567143 IQSEC2Q5JU85 1478 aa8.76□□□□□ -1.01
GINS3-206ENST00000567143 SKAP1Q86WV1 359 aa8.76□□□□□ -1.01
GINS3-206ENST00000567143 A2ML1A8K2U0 1454 aa8.76□□□□□ -1.01
GINS3-206ENST00000567143 E9PCH4 1651 aa8.75□□□□□ -1.01
GINS3-206ENST00000567143 RGL3Q3MIN7 710 aa8.75□□□□□ -1.01
GINS3-206ENST00000567143 SLIT1O75093 1534 aa8.75□□□□□ -1.01
GINS3-206ENST00000567143 PKD2Q13563 968 aa8.75□□□□□ -1.01
GINS3-206ENST00000567143 ARHGAP23Q9P227 1491 aa8.75□□□□□ -1.01
GINS3-206ENST00000567143 ZMYM3Q14202 1370 aa8.75□□□□□ -1.01
GINS3-206ENST00000567143 SYNMO15061 1565 aa8.75□□□□□ -1.01
GINS3-206ENST00000567143 MED14O60244 1454 aa8.75□□□□□ -1.01
GINS3-206ENST00000567143 CEP170BQ9Y4F5 1589 aaPredicted RBP8.74□□□□□ -1.01
GINS3-206ENST00000567143 DEKP35659 375 aaKnown RBP8.74□□□□□ -1.01
GINS3-206ENST00000567143 POLR1AO95602 1720 aaPredicted RBP8.74□□□□□ -1.01
GINS3-206ENST00000567143 UBR1Q8IWV7 1749 aa8.74□□□□□ -1.01
GINS3-206ENST00000567143 STRCQ7RTU9 1775 aa8.73□□□□□ -1.01
GINS3-206ENST00000567143 FANCIQ9NVI1 1328 aa8.73□□□□□ -1.01
GINS3-206ENST00000567143 TRPM2O94759 1503 aa8.73□□□□□ -1.01
GINS3-206ENST00000567143 CARD11Q9BXL7 1154 aa8.73□□□□□ -1.01
GINS3-206ENST00000567143 UGGT1Q9NYU2 1555 aa8.72□□□□□ -1.01
GINS3-206ENST00000567143 ZBED9Q6R2W3 1325 aa8.72□□□□□ -1.01
GINS3-206ENST00000567143 SPHKAPQ2M3C7 1700 aa8.72□□□□□ -1.01
GINS3-206ENST00000567143 GRWD1Q9BQ67 446 aaKnown RBP eCLIP8.72□□□□□ -1.01
GINS3-206ENST00000567143 NOP58Q9Y2X3 529 aaKnown RBP8.71□□□□□ -1.01
GINS3-206ENST00000567143 LAS1LQ9Y4W2 734 aaKnown RBP8.71□□□□□ -1.01
GINS3-206ENST00000567143 DCAF11Q8TEB1 546 aa8.71□□□□□ -1.02
GINS3-206ENST00000567143 ADGRB3O60242 1522 aa8.71□□□□□ -1.02
GINS3-206ENST00000567143 ST20-MTHFSA0A0A6YYL1 179 aa8.71□□□□□ -1.02
GINS3-206ENST00000567143 PLIN1O60240 522 aa8.71□□□□□ -1.02
GINS3-206ENST00000567143 TMEM131LA2VDJ0 1609 aa8.7□□□□□ -1.02
GINS3-206ENST00000567143 PRAG1Q86YV5 1406 aa8.7□□□□□ -1.02
GINS3-206ENST00000567143 RTN4Q9NQC3 1192 aaKnown RBP8.7□□□□□ -1.02
GINS3-206ENST00000567143 CC2D1BQ5T0F9 858 aaKnown RBP8.7□□□□□ -1.02
GINS3-206ENST00000567143 ANP32AP39687 249 aaKnown RBP8.69□□□□□ -1.02
GINS3-206ENST00000567143 KANK1Q14678 1352 aa8.69□□□□□ -1.02
GINS3-206ENST00000567143 USP47Q96K76 1375 aa8.69□□□□□ -1.02
GINS3-206ENST00000567143 EXOC6Q8TAG9 804 aa8.69□□□□□ -1.02
GINS3-206ENST00000567143 UHRF1BP1Q6BDS2 1440 aa8.68□□□□□ -1.02
GINS3-206ENST00000567143 NUDCQ9Y266 331 aa8.68□□□□□ -1.02
GINS3-206ENST00000567143 ANKRD30BQ9BXX2 1392 aa8.68□□□□□ -1.02
GINS3-206ENST00000567143 DIP2AQ14689 1571 aa8.68□□□□□ -1.02
GINS3-206ENST00000567143 CDCA7LQ96GN5 454 aa8.67□□□□□ -1.02
GINS3-206ENST00000567143 IFT172Q9UG01 1749 aa8.67□□□□□ -1.02
GINS3-206ENST00000567143 ZBTB47Q9UFB7 747 aaPredicted RBP8.67□□□□□ -1.02
GINS3-206ENST00000567143 TNRQ92752 1358 aa8.67□□□□□ -1.02
GINS3-206ENST00000567143 RTL5Q5HYW3 569 aaPredicted RBP8.67□□□□□ -1.02
GINS3-206ENST00000567143 ZFYVE9O95405 1425 aa8.66□□□□□ -1.02
GINS3-206ENST00000567143 NUP155O75694 1391 aa8.65□□□□□ -1.02
GINS3-206ENST00000567143 NWD1Q149M9 1564 aa8.65□□□□□ -1.02
GINS3-206ENST00000567143 KIF3BO15066 747 aa8.65□□□□□ -1.02
GINS3-206ENST00000567143 PNISRQ8TF01 805 aaKnown RBP8.64□□□□□ -1.03
GINS3-206ENST00000567143 SLC4A3P48751 1232 aa8.64□□□□□ -1.03
GINS3-206ENST00000567143 CLTCL1P53675 1640 aa8.64□□□□□ -1.03
GINS3-206ENST00000567143 SETBP1Q9Y6X0 1596 aa8.63□□□□□ -1.03
GINS3-206ENST00000567143 NBPF1Q3BBV0 1214 aa8.63□□□□□ -1.03
GINS3-206ENST00000567143 SLC52A1Q9NWF4 448 aa8.63□□□□□ -1.03
GINS3-206ENST00000567143 NRXN1Q9ULB1 1477 aa8.63□□□□□ -1.03
GINS3-206ENST00000567143 SETD1AO15047 1707 aaKnown RBP8.62□□□□□ -1.03
GINS3-206ENST00000567143 IQGAP1P46940 1657 aa8.62□□□□□ -1.03
GINS3-206ENST00000567143 ARID4BQ4LE39 1312 aaPredicted RBP8.62□□□□□ -1.03
GINS3-206ENST00000567143 WASHC2CQ9Y4E1 1318 aa8.62□□□□□ -1.03
GINS3-206ENST00000567143 SENP3Q9H4L4 574 aaPredicted RBP8.62□□□□□ -1.03
GINS3-206ENST00000567143 ERICH6BQ5W0A0 696 aa8.61□□□□□ -1.03
GINS3-206ENST00000567143 IPO9Q96P70 1041 aaKnown RBP8.61□□□□□ -1.03
GINS3-206ENST00000567143 RCAN3Q9UKA8 241 aa8.61□□□□□ -1.03
GINS3-206ENST00000567143 LTBP4Q8N2S1 1624 aa8.61□□□□□ -1.03
GINS3-206ENST00000567143 PPLO60437 1756 aa8.61□□□□□ -1.03
GINS3-206ENST00000567143 KIF1BO60333 1816 aa8.61□□□□□ -1.03
GINS3-206ENST00000567143 NEXMIFQ5QGS0 1516 aa8.6□□□□□ -1.03
GINS3-206ENST00000567143 NRXN3Q9Y4C0 1643 aa8.6□□□□□ -1.03
GINS3-206ENST00000567143 SPATA31E1Q6ZUB1 1445 aa8.6□□□□□ -1.03
GINS3-206ENST00000567143 RRP1P56182 461 aaKnown RBP8.59□□□□□ -1.03
GINS3-206ENST00000567143 LAMC1P11047 1609 aa8.59□□□□□ -1.03
GINS3-206ENST00000567143 NEFMP07197 916 aa8.59□□□□□ -1.03
GINS3-206ENST00000567143 ROCK2O75116 1388 aaKnown RBP8.59□□□□□ -1.03
GINS3-206ENST00000567143 MYOM2P54296 1465 aa8.59□□□□□ -1.03
GINS3-206ENST00000567143 CPS1P31327 1500 aa8.59□□□□□ -1.03
GINS3-206ENST00000567143 IL27Q8NEV9 243 aa8.59□□□□□ -1.03
GINS3-206ENST00000567143 KNDC1Q76NI1 1749 aa8.59□□□□□ -1.04
GINS3-206ENST00000567143 MYO5BQ9ULV0 1848 aa8.58□□□□□ -1.04
GINS3-206ENST00000567143 C20orf194Q5TEA3 1177 aa8.58□□□□□ -1.04
GINS3-206ENST00000567143 TMEM2Q9UHN6 1383 aa8.58□□□□□ -1.04
GINS3-206ENST00000567143 SMG6Q86US8 1419 aaKnown RBP8.58□□□□□ -1.04
GINS3-206ENST00000567143 NCOA3Q9Y6Q9 1424 aa8.58□□□□□ -1.04
GINS3-206ENST00000567143 PIK3R4Q99570 1358 aa8.57□□□□□ -1.04
GINS3-206ENST00000567143 SCAF11Q99590 1463 aaKnown RBP8.57□□□□□ -1.04
GINS3-206ENST00000567143 KIAA1210Q9ULL0 1709 aa8.57□□□□□ -1.04
GINS3-206ENST00000567143 PDE4AP27815 886 aa8.57□□□□□ -1.04
GINS3-206ENST00000567143 GGT6Q6P531 493 aa8.57□□□□□ -1.04
GINS3-206ENST00000567143 RGS3P49796 1198 aa8.57□□□□□ -1.04
GINS3-206ENST00000567143 CRBNQ96SW2 442 aa8.57□□□□□ -1.04
GINS3-206ENST00000567143 XRN1Q8IZH2 1706 aaKnown RBP8.56□□□□□ -1.04
GINS3-206ENST00000567143 PLEKHG1Q9ULL1 1385 aa8.56□□□□□ -1.04
GINS3-206ENST00000567143 RPGRIP1LQ68CZ1 1315 aa8.56□□□□□ -1.04
GINS3-206ENST00000567143 PANK3Q9H999 370 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms