RNA–Protein interactions for RNA: ENST00000567109.5

CDH13-209, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CDH13, Length 8,042 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-209ENST00000567109 RSPH6AQ9H0K4 717 aa7.85□□□□□ -1.15
CDH13-209ENST00000567109 CTDP1Q9Y5B0 961 aaPredicted RBP7.85□□□□□ -1.15
CDH13-209ENST00000567109 ZNF518AQ6AHZ1 1483 aa7.84□□□□□ -1.15
CDH13-209ENST00000567109 TRIM34Q9BYJ4 488 aa7.84□□□□□ -1.15
CDH13-209ENST00000567109 KLHL34Q8N239 644 aa7.84□□□□□ -1.15
CDH13-209ENST00000567109 ANKRD30BQ9BXX2 1392 aa7.84□□□□□ -1.15
CDH13-209ENST00000567109 MS4A1P11836 297 aa7.84□□□□□ -1.15
CDH13-209ENST00000567109 CAMSAP2Q08AD1 1489 aa7.84□□□□□ -1.15
CDH13-209ENST00000567109 SHANK2Q9UPX8 1470 aa7.84□□□□□ -1.15
CDH13-209ENST00000567109 RASSF8Q8NHQ8 419 aa7.83□□□□□ -1.16
CDH13-209ENST00000567109 CNTLNQ9NXG0 1405 aa7.83□□□□□ -1.16
CDH13-209ENST00000567109 MARCH6O60337 910 aa7.83□□□□□ -1.16
CDH13-209ENST00000567109 NCOA1Q15788 1441 aa7.83□□□□□ -1.16
CDH13-209ENST00000567109 HDGFL2Q7Z4V5 671 aaPredicted RBP7.83□□□□□ -1.16
CDH13-209ENST00000567109 GPATCH3Q96I76 525 aa7.83□□□□□ -1.16
CDH13-209ENST00000567109 EVA1CP58658 441 aa7.82□□□□□ -1.16
CDH13-209ENST00000567109 HIRIP3Q9BW71 556 aaPredicted RBP7.82□□□□□ -1.16
CDH13-209ENST00000567109 ERBINQ96RT1 1412 aa7.82□□□□□ -1.16
CDH13-209ENST00000567109 WWC1Q8IX03 1113 aa7.82□□□□□ -1.16
CDH13-209ENST00000567109 SAFB2Q14151 953 aaKnown RBP eCLIP7.81□□□□□ -1.16
CDH13-209ENST00000567109 CREBRFQ8IUR6 639 aa7.81□□□□□ -1.16
CDH13-209ENST00000567109 PRDM2Q13029 1718 aa7.81□□□□□ -1.16
CDH13-209ENST00000567109 ROCK2O75116 1388 aaKnown RBP7.81□□□□□ -1.16
CDH13-209ENST00000567109 CCDC34Q96HJ3 373 aa7.81□□□□□ -1.16
CDH13-209ENST00000567109 NAP1L5Q96NT1 182 aaPredicted RBP7.81□□□□□ -1.16
CDH13-209ENST00000567109 NAIPQ13075 1403 aa7.81□□□□□ -1.16
CDH13-209ENST00000567109 PCF11O94913 1555 aaKnown RBP7.81□□□□□ -1.16
CDH13-209ENST00000567109 ANKLE2Q86XL3 938 aa7.81□□□□□ -1.16
CDH13-209ENST00000567109 STK26Q9P289 416 aa7.81□□□□□ -1.16
CDH13-209ENST00000567109 DMRT2Q9Y5R5 561 aa7.8□□□□□ -1.16
CDH13-209ENST00000567109 TCERG1O14776 1098 aaKnown RBP7.8□□□□□ -1.16
CDH13-209ENST00000567109 SENP3-EIF4A1A0A087X0R7 540 aa7.8□□□□□ -1.16
CDH13-209ENST00000567109 TPM4P67936 248 aa7.8□□□□□ -1.16
CDH13-209ENST00000567109 CC2D1BQ5T0F9 858 aaKnown RBP7.8□□□□□ -1.16
CDH13-209ENST00000567109 TRAPPC8Q9Y2L5 1435 aa7.8□□□□□ -1.16
CDH13-209ENST00000567109 HSPA5P11021 654 aaKnown RBP7.8□□□□□ -1.16
CDH13-209ENST00000567109 KIF14Q15058 1648 aa7.79□□□□□ -1.16
CDH13-209ENST00000567109 MAGI2Q86UL8 1455 aa7.79□□□□□ -1.16
CDH13-209ENST00000567109 HSP90B1P14625 803 aaKnown RBP7.79□□□□□ -1.16
CDH13-209ENST00000567109 HSCBQ8IWL3 235 aa7.79□□□□□ -1.16
CDH13-209ENST00000567109 TERF2IPQ9NYB0 399 aa7.79□□□□□ -1.16
CDH13-209ENST00000567109 FOXD1Q16676 465 aa7.79□□□□□ -1.16
CDH13-209ENST00000567109 TXNDC2Q86VQ3 553 aa7.78□□□□□ -1.16
CDH13-209ENST00000567109 CLASP1Q7Z460 1538 aa7.78□□□□□ -1.16
CDH13-209ENST00000567109 TNRQ92752 1358 aa7.78□□□□□ -1.16
CDH13-209ENST00000567109 RBM19Q9Y4C8 960 aaKnown RBP7.78□□□□□ -1.16
CDH13-209ENST00000567109 RAD21O60216 631 aa7.78□□□□□ -1.16
CDH13-209ENST00000567109 A2MP01023 1474 aa7.77□□□□□ -1.16
CDH13-209ENST00000567109 MSNP26038 577 aaKnown RBP7.77□□□□□ -1.16
CDH13-209ENST00000567109 ABCA8O94911 1581 aa7.77□□□□□ -1.17
CDH13-209ENST00000567109 RAPGEF6Q8TEU7 1601 aa7.77□□□□□ -1.17
CDH13-209ENST00000567109 MTERF4Q7Z6M4 381 aaKnown RBP7.77□□□□□ -1.17
CDH13-209ENST00000567109 NOL10Q9BSC4 688 aaKnown RBP7.77□□□□□ -1.17
CDH13-209ENST00000567109 MAGI3Q5TCQ9 1506 aa7.77□□□□□ -1.17
CDH13-209ENST00000567109 APBB1O00213 710 aa7.77□□□□□ -1.17
CDH13-209ENST00000567109 HTATSF1O43719 755 aaKnown RBP7.77□□□□□ -1.17
CDH13-209ENST00000567109 ATP10AO60312 1499 aa7.77□□□□□ -1.17
CDH13-209ENST00000567109 RGS3P49796 1198 aa7.77□□□□□ -1.17
CDH13-209ENST00000567109 NGEFQ8N5V2 710 aa7.77□□□□□ -1.17
CDH13-209ENST00000567109 CENPJQ9HC77 1338 aaPredicted RBP7.76□□□□□ -1.17
CDH13-209ENST00000567109 GOLGA6L1Q8N7Z2 621 aa7.76□□□□□ -1.17
CDH13-209ENST00000567109 FBXW7Q969H0 707 aa7.76□□□□□ -1.17
CDH13-209ENST00000567109 SAMD9Q5K651 1589 aa7.76□□□□□ -1.17
CDH13-209ENST00000567109 PDE3BQ13370 1112 aa7.76□□□□□ -1.17
CDH13-209ENST00000567109 AMOTL1Q8IY63 956 aa7.76□□□□□ -1.17
CDH13-209ENST00000567109 ARAP3Q8WWN8 1544 aa7.76□□□□□ -1.17
CDH13-209ENST00000567109 EVC2Q86UK5 1308 aa7.75□□□□□ -1.17
CDH13-209ENST00000567109 PES1O00541 588 aaKnown RBP7.75□□□□□ -1.17
CDH13-209ENST00000567109 ADGRL2O95490 1459 aa7.75□□□□□ -1.17
CDH13-209ENST00000567109 MAP7D2Q96T17 732 aa7.75□□□□□ -1.17
CDH13-209ENST00000567109 KIF21AQ7Z4S6 1674 aa7.75□□□□□ -1.17
CDH13-209ENST00000567109 DEKP35659 375 aaKnown RBP7.75□□□□□ -1.17
CDH13-209ENST00000567109 CHMP4AQ9BY43 222 aa7.74□□□□□ -1.17
CDH13-209ENST00000567109 TOMM22Q9NS69 142 aa7.74□□□□□ -1.17
CDH13-209ENST00000567109 CALD1Q05682 793 aaKnown RBP7.74□□□□□ -1.17
CDH13-209ENST00000567109 MLH3Q9UHC1 1453 aa7.74□□□□□ -1.17
CDH13-209ENST00000567109 AAMPQ13685 434 aa7.74□□□□□ -1.17
CDH13-209ENST00000567109 MORC1Q86VD1 984 aa7.74□□□□□ -1.17
CDH13-209ENST00000567109 TPD52L1Q16890 204 aaPredicted RBP7.73□□□□□ -1.17
CDH13-209ENST00000567109 PROSER2Q86WR7 435 aaPredicted RBP7.73□□□□□ -1.17
CDH13-209ENST00000567109 TRIM6-TRIM34B2RNG4 842 aa7.73□□□□□ -1.17
CDH13-209ENST00000567109 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.73□□□□□ -1.17
CDH13-209ENST00000567109 CCAR1Q8IX12 1150 aaKnown RBP7.73□□□□□ -1.17
CDH13-209ENST00000567109 SPRYD3Q8NCJ5 442 aa7.72□□□□□ -1.17
CDH13-209ENST00000567109 RALBP1Q15311 655 aa7.72□□□□□ -1.17
CDH13-209ENST00000567109 IPO9Q96P70 1041 aaKnown RBP7.72□□□□□ -1.17
CDH13-209ENST00000567109 TSR1Q2NL82 804 aaKnown RBP7.72□□□□□ -1.17
CDH13-209ENST00000567109 VPS37DQ86XT2 251 aa7.72□□□□□ -1.17
CDH13-209ENST00000567109 NGDNQ8NEJ9 315 aaKnown RBP7.72□□□□□ -1.17
CDH13-209ENST00000567109 CCDC43Q96MW1 224 aaKnown RBP7.72□□□□□ -1.17
CDH13-209ENST00000567109 MAPKBP1O60336 1514 aa7.72□□□□□ -1.17
CDH13-209ENST00000567109 KTN1Q86UP2 1357 aaKnown RBP7.71□□□□□ -1.17
CDH13-209ENST00000567109 DUOX2Q9NRD8 1548 aa7.71□□□□□ -1.17
CDH13-209ENST00000567109 TPM2P07951 284 aa7.71□□□□□ -1.17
CDH13-209ENST00000567109 AKAP17AQ02040 695 aaKnown RBP7.71□□□□□ -1.17
CDH13-209ENST00000567109 MBD5Q9P267 1494 aa7.71□□□□□ -1.17
CDH13-209ENST00000567109 TSHZ2Q9NRE2 1034 aa7.71□□□□□ -1.18
CDH13-209ENST00000567109 HDAC5Q9UQL6 1122 aa7.71□□□□□ -1.18
CDH13-209ENST00000567109 SYTL4Q96C24 671 aaPredicted RBP7.71□□□□□ -1.18
CDH13-209ENST00000567109 NUTM2DQ5VT03 806 aaPredicted RBP7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms