RNA–Protein interactions for RNA: ENST00000566661.5

KLHDC4-217, Transcript of kelch domain containing 4, humanhuman

TSL 5

Gene KLHDC4, Length 2,232 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-217ENST00000566661 DISP3Q9P2K9 1392 aa23.5■■□□□ 1.35
KLHDC4-217ENST00000566661 DIP2BQ9P265 1576 aa23.5■■□□□ 1.35
KLHDC4-217ENST00000566661 PNISRQ8TF01 805 aaKnown RBP23.5■■□□□ 1.35
KLHDC4-217ENST00000566661 YEATS2Q9ULM3 1422 aa23.5■■□□□ 1.35
KLHDC4-217ENST00000566661 COL17A1Q9UMD9 1497 aaPredicted RBP23.49■■□□□ 1.35
KLHDC4-217ENST00000566661 BRD4O60885 1362 aaPredicted RBP23.49■■□□□ 1.35
KLHDC4-217ENST00000566661 ABCC3O15438 1527 aa23.49■■□□□ 1.35
KLHDC4-217ENST00000566661 MROH2AA6NES4 1674 aa23.48■■□□□ 1.35
KLHDC4-217ENST00000566661 RALBP1Q15311 655 aa23.48■■□□□ 1.35
KLHDC4-217ENST00000566661 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
KLHDC4-217ENST00000566661 IQGAP1P46940 1657 aa23.46■■□□□ 1.35
KLHDC4-217ENST00000566661 MSH5O43196 834 aa23.45■■□□□ 1.35
KLHDC4-217ENST00000566661 TMC1Q8TDI8 760 aa23.45■■□□□ 1.35
KLHDC4-217ENST00000566661 TSPOAP1O95153 1857 aa23.45■■□□□ 1.34
KLHDC4-217ENST00000566661 ADGRF5Q8IZF2 1346 aa23.45■■□□□ 1.34
KLHDC4-217ENST00000566661 MYBBP1AQ9BQG0 1328 aaKnown RBP23.45■■□□□ 1.34
KLHDC4-217ENST00000566661 CHGAP10645 457 aaKnown RBP23.44■■□□□ 1.34
KLHDC4-217ENST00000566661 B4GALNT3Q6L9W6 998 aa23.44■■□□□ 1.34
KLHDC4-217ENST00000566661 TMF1P82094 1093 aa23.43■■□□□ 1.34
KLHDC4-217ENST00000566661 CAMSAP1Q5T5Y3 1602 aa23.42■■□□□ 1.34
KLHDC4-217ENST00000566661 IFT172Q9UG01 1749 aa23.42■■□□□ 1.34
KLHDC4-217ENST00000566661 MYOM2P54296 1465 aa23.42■■□□□ 1.34
KLHDC4-217ENST00000566661 SCAF11Q99590 1463 aaKnown RBP23.41■■□□□ 1.34
KLHDC4-217ENST00000566661 CFAP70Q5T0N1 1121 aa23.41■■□□□ 1.34
KLHDC4-217ENST00000566661 ADGRB3O60242 1522 aa23.41■■□□□ 1.34
KLHDC4-217ENST00000566661 KIAA1210Q9ULL0 1709 aa23.4■■□□□ 1.34
KLHDC4-217ENST00000566661 SIGLEC1Q9BZZ2 1709 aa23.39■■□□□ 1.34
KLHDC4-217ENST00000566661 PER1O15534 1290 aaPredicted RBP23.37■■□□□ 1.33
KLHDC4-217ENST00000566661 NOS1P29475 1434 aa23.37■■□□□ 1.33
KLHDC4-217ENST00000566661 ZMYM4Q5VZL5 1548 aa23.36■■□□□ 1.33
KLHDC4-217ENST00000566661 PANK3Q9H999 370 aa23.35■■□□□ 1.33
KLHDC4-217ENST00000566661 NRXN1Q9ULB1 1477 aa23.35■■□□□ 1.33
KLHDC4-217ENST00000566661 PARD3Q8TEW0 1356 aa23.34■■□□□ 1.33
KLHDC4-217ENST00000566661 INSRP06213 1382 aa23.33■■□□□ 1.32
KLHDC4-217ENST00000566661 SYNMO15061 1565 aa23.32■■□□□ 1.32
KLHDC4-217ENST00000566661 ERICH6Q7L0X2 663 aa23.32■■□□□ 1.32
KLHDC4-217ENST00000566661 NLRP13Q86W25 1043 aa23.32■■□□□ 1.32
KLHDC4-217ENST00000566661 ZC3H13Q5T200 1668 aaKnown RBP23.31■■□□□ 1.32
KLHDC4-217ENST00000566661 PPLO60437 1756 aa23.31■■□□□ 1.32
KLHDC4-217ENST00000566661 ARHGAP31Q2M1Z3 1444 aa23.31■■□□□ 1.32
KLHDC4-217ENST00000566661 EIF3AQ14152 1382 aaKnown RBP23.3■■□□□ 1.32
KLHDC4-217ENST00000566661 PIK3C2BO00750 1634 aa23.29■■□□□ 1.32
KLHDC4-217ENST00000566661 CCDC136Q96JN2 1154 aa23.28■■□□□ 1.32
KLHDC4-217ENST00000566661 PDE3BQ13370 1112 aa23.28■■□□□ 1.32
KLHDC4-217ENST00000566661 CC2D1BQ5T0F9 858 aaKnown RBP23.27■■□□□ 1.31
KLHDC4-217ENST00000566661 RPGRIP1LQ68CZ1 1315 aa23.26■■□□□ 1.31
KLHDC4-217ENST00000566661 PIK3C2GO75747 1445 aa23.26■■□□□ 1.31
KLHDC4-217ENST00000566661 IDI1Q13907 227 aa23.25■■□□□ 1.31
KLHDC4-217ENST00000566661 KIF13AQ9H1H9 1805 aa23.25■■□□□ 1.31
KLHDC4-217ENST00000566661 CDCA8Q53HL2 280 aa23.24■■□□□ 1.31
KLHDC4-217ENST00000566661 NUTM2DQ5VT03 806 aaPredicted RBP23.24■■□□□ 1.31
KLHDC4-217ENST00000566661 C14orf93Q9H972 538 aaKnown RBP23.24■■□□□ 1.31
KLHDC4-217ENST00000566661 SETBP1Q9Y6X0 1596 aa23.21■■□□□ 1.31
KLHDC4-217ENST00000566661 PREX1Q8TCU6 1659 aa23.21■■□□□ 1.31
KLHDC4-217ENST00000566661 FBXO31Q5XUX0 539 aaPredicted RBP23.2■■□□□ 1.3
KLHDC4-217ENST00000566661 TMEM132EQ6IEE7 984 aa23.2■■□□□ 1.3
KLHDC4-217ENST00000566661 NEXMIFQ5QGS0 1516 aa23.19■■□□□ 1.3
KLHDC4-217ENST00000566661 ERVK-7P63135 1459 aa23.19■■□□□ 1.3
KLHDC4-217ENST00000566661 SENP3-EIF4A1A0A087X0R7 540 aa23.19■■□□□ 1.3
KLHDC4-217ENST00000566661 SLC52A1Q9NWF4 448 aa23.19■■□□□ 1.3
KLHDC4-217ENST00000566661 RRP1P56182 461 aaKnown RBP23.18■■□□□ 1.3
KLHDC4-217ENST00000566661 TRAK1Q9UPV9 953 aa23.18■■□□□ 1.3
KLHDC4-217ENST00000566661 MYOM1P52179 1685 aa23.18■■□□□ 1.3
KLHDC4-217ENST00000566661 ADGRB1O14514 1584 aa23.18■■□□□ 1.3
KLHDC4-217ENST00000566661 REREQ9P2R6 1566 aa23.18■■□□□ 1.3
KLHDC4-217ENST00000566661 KDM5AP29375 1690 aaKnown RBP23.17■■□□□ 1.3
KLHDC4-217ENST00000566661 VGFO15240 615 aaPredicted RBP23.17■■□□□ 1.3
KLHDC4-217ENST00000566661 AGLP35573 1532 aa23.16■■□□□ 1.3
KLHDC4-217ENST00000566661 MYO3AQ8NEV4 1616 aa23.16■■□□□ 1.3
KLHDC4-217ENST00000566661 KNSTRNQ9Y448 316 aa23.16■■□□□ 1.3
KLHDC4-217ENST00000566661 BLMP54132 1417 aaPredicted RBP23.16■■□□□ 1.3
KLHDC4-217ENST00000566661 MYO5BQ9ULV0 1848 aa23.16■■□□□ 1.3
KLHDC4-217ENST00000566661 CENPJQ9HC77 1338 aaPredicted RBP23.15■■□□□ 1.3
KLHDC4-217ENST00000566661 RCAN3Q9UKA8 241 aa23.14■■□□□ 1.3
KLHDC4-217ENST00000566661 SLC24A1O60721 1099 aa23.13■■□□□ 1.29
KLHDC4-217ENST00000566661 MLECQ14165 292 aa23.13■■□□□ 1.29
KLHDC4-217ENST00000566661 TMEM131LA2VDJ0 1609 aa23.12■■□□□ 1.29
KLHDC4-217ENST00000566661 AMER1Q5JTC6 1135 aaPredicted RBP23.12■■□□□ 1.29
KLHDC4-217ENST00000566661 SENP3Q9H4L4 574 aaPredicted RBP23.12■■□□□ 1.29
KLHDC4-217ENST00000566661 SBNO2Q9Y2G9 1366 aa23.12■■□□□ 1.29
KLHDC4-217ENST00000566661 CLTCQ00610 1675 aaKnown RBP23.11■■□□□ 1.29
KLHDC4-217ENST00000566661 PPP6R1Q9UPN7 881 aa23.1■■□□□ 1.29
KLHDC4-217ENST00000566661 NOP58Q9Y2X3 529 aaKnown RBP23.1■■□□□ 1.29
KLHDC4-217ENST00000566661 QRICH2Q9H0J4 1663 aa23.08■■□□□ 1.29
KLHDC4-217ENST00000566661 ARHGEF40Q8TER5 1519 aa23.08■■□□□ 1.29
KLHDC4-217ENST00000566661 ASXL1Q8IXJ9 1541 aa23.08■■□□□ 1.28
KLHDC4-217ENST00000566661 ZFYVE9O95405 1425 aa23.07■■□□□ 1.28
KLHDC4-217ENST00000566661 ANP32AP39687 249 aaKnown RBP23.06■■□□□ 1.28
KLHDC4-217ENST00000566661 PPP2R1AP30153 589 aa23.04■■□□□ 1.28
KLHDC4-217ENST00000566661 CARD14Q9BXL6 1004 aa23.04■■□□□ 1.28
KLHDC4-217ENST00000566661 TCERG1O14776 1098 aaKnown RBP23.03■■□□□ 1.28
KLHDC4-217ENST00000566661 ARHGEF28Q8N1W1 1705 aaKnown RBP23.02■■□□□ 1.28
KLHDC4-217ENST00000566661 EXOC6Q8TAG9 804 aa23.02■■□□□ 1.28
KLHDC4-217ENST00000566661 IPO9Q96P70 1041 aaKnown RBP23.02■■□□□ 1.28
KLHDC4-217ENST00000566661 STAG3Q9UJ98 1225 aa23.02■■□□□ 1.28
KLHDC4-217ENST00000566661 NPC1L1Q9UHC9 1359 aa23.01■■□□□ 1.27
KLHDC4-217ENST00000566661 STK26Q9P289 416 aa23■■□□□ 1.27
KLHDC4-217ENST00000566661 SPATA31D1Q6ZQQ2 1576 aa22.99■■□□□ 1.27
KLHDC4-217ENST00000566661 SALL2Q9Y467 1007 aaPredicted RBP22.98■■□□□ 1.27
KLHDC4-217ENST00000566661 MS4A1P11836 297 aa22.98■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms