RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 PLA2R1Q13018 1463 aa16.87■□□□□ 0.29
KARS-207ENST00000566560 ADGRB3O60242 1522 aa16.87■□□□□ 0.29
KARS-207ENST00000566560 A2ML1A8K2U0 1454 aa16.86■□□□□ 0.29
KARS-207ENST00000566560 UBR1Q8IWV7 1749 aa16.86■□□□□ 0.29
KARS-207ENST00000566560 KDM5AP29375 1690 aaKnown RBP16.85■□□□□ 0.29
KARS-207ENST00000566560 KIF1BO60333 1816 aa16.85■□□□□ 0.29
KARS-207ENST00000566560 CCDC144AA2RUR9 1427 aa16.85■□□□□ 0.29
KARS-207ENST00000566560 LMTK3Q96Q04 1460 aa16.85■□□□□ 0.29
KARS-207ENST00000566560 MYO5BQ9ULV0 1848 aa16.84■□□□□ 0.29
KARS-207ENST00000566560 POLA2Q14181 598 aa16.83■□□□□ 0.28
KARS-207ENST00000566560 TMEM131LA2VDJ0 1609 aa16.82■□□□□ 0.28
KARS-207ENST00000566560 ANKRD30BQ9BXX2 1392 aa16.82■□□□□ 0.28
KARS-207ENST00000566560 SLC52A1Q9NWF4 448 aa16.81■□□□□ 0.28
KARS-207ENST00000566560 DSG3P32926 999 aa16.78■□□□□ 0.28
KARS-207ENST00000566560 IDI1Q13907 227 aa16.78■□□□□ 0.28
KARS-207ENST00000566560 STAG3Q9UJ98 1225 aa16.77■□□□□ 0.28
KARS-207ENST00000566560 NEURL4Q96JN8 1562 aa16.77■□□□□ 0.27
KARS-207ENST00000566560 POLR1AO95602 1720 aaPredicted RBP16.76■□□□□ 0.27
KARS-207ENST00000566560 ABCB7O75027 752 aa16.75■□□□□ 0.27
KARS-207ENST00000566560 CHGAP10645 457 aaKnown RBP16.75■□□□□ 0.27
KARS-207ENST00000566560 SLIT1O75093 1534 aa16.74■□□□□ 0.27
KARS-207ENST00000566560 SPATA31E1Q6ZUB1 1445 aa16.73■□□□□ 0.27
KARS-207ENST00000566560 IFT172Q9UG01 1749 aa16.73■□□□□ 0.27
KARS-207ENST00000566560 ARHGAP23Q9P227 1491 aa16.72■□□□□ 0.27
KARS-207ENST00000566560 PPLO60437 1756 aa16.72■□□□□ 0.27
KARS-207ENST00000566560 NEXMIFQ5QGS0 1516 aa16.71■□□□□ 0.27
KARS-207ENST00000566560 HSPA2P54652 639 aa16.71■□□□□ 0.27
KARS-207ENST00000566560 THEMISQ8N1K5 641 aaPredicted RBP16.71■□□□□ 0.27
KARS-207ENST00000566560 CCER1Q8TC90 406 aaPredicted RBP16.71■□□□□ 0.27
KARS-207ENST00000566560 TMEM2Q9UHN6 1383 aa16.71■□□□□ 0.27
KARS-207ENST00000566560 ZFYVE9O95405 1425 aa16.7■□□□□ 0.26
KARS-207ENST00000566560 ZNF326Q5BKZ1 582 aaKnown RBP16.69■□□□□ 0.26
KARS-207ENST00000566560 RIMS2Q9UQ26 1411 aa16.69■□□□□ 0.26
KARS-207ENST00000566560 SCAF11Q99590 1463 aaKnown RBP16.68■□□□□ 0.26
KARS-207ENST00000566560 CLSPNQ9HAW4 1339 aa16.68■□□□□ 0.26
KARS-207ENST00000566560 STRCQ7RTU9 1775 aa16.67■□□□□ 0.26
KARS-207ENST00000566560 SIN3AQ96ST3 1273 aa16.66■□□□□ 0.26
KARS-207ENST00000566560 IQGAP1P46940 1657 aa16.65■□□□□ 0.26
KARS-207ENST00000566560 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
KARS-207ENST00000566560 RGL3Q3MIN7 710 aa16.64■□□□□ 0.25
KARS-207ENST00000566560 MYOM2P54296 1465 aa16.64■□□□□ 0.25
KARS-207ENST00000566560 PPP1R15AO75807 674 aaPredicted RBP16.63■□□□□ 0.25
KARS-207ENST00000566560 ANKLE2Q86XL3 938 aa16.62■□□□□ 0.25
KARS-207ENST00000566560 EID1Q9Y6B2 187 aa16.62■□□□□ 0.25
KARS-207ENST00000566560 RPGRIP1LQ68CZ1 1315 aa16.62■□□□□ 0.25
KARS-207ENST00000566560 MED14O60244 1454 aa16.61■□□□□ 0.25
KARS-207ENST00000566560 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.61■□□□□ 0.25
KARS-207ENST00000566560 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
KARS-207ENST00000566560 NPHP4O75161 1426 aaPredicted RBP16.61■□□□□ 0.25
KARS-207ENST00000566560 NRXN3Q9Y4C0 1643 aa16.6■□□□□ 0.25
KARS-207ENST00000566560 LTKP29376 864 aa16.6■□□□□ 0.25
KARS-207ENST00000566560 NUTM2DQ5VT03 806 aaPredicted RBP16.6■□□□□ 0.25
KARS-207ENST00000566560 TXNDC2Q86VQ3 553 aa16.6■□□□□ 0.25
KARS-207ENST00000566560 ZBTB12Q9Y330 459 aaPredicted RBP16.6■□□□□ 0.25
KARS-207ENST00000566560 NCKAP5LQ9HCH0 1330 aa16.6■□□□□ 0.25
KARS-207ENST00000566560 SETBP1Q9Y6X0 1596 aa16.6■□□□□ 0.25
KARS-207ENST00000566560 HDGFP51858 240 aaKnown RBP16.59■□□□□ 0.25
KARS-207ENST00000566560 PLEKHG1Q9ULL1 1385 aa16.59■□□□□ 0.25
KARS-207ENST00000566560 DIP2AQ14689 1571 aa16.58■□□□□ 0.24
KARS-207ENST00000566560 LAMC1P11047 1609 aa16.57■□□□□ 0.24
KARS-207ENST00000566560 NRXN1Q9ULB1 1477 aa16.57■□□□□ 0.24
KARS-207ENST00000566560 PIK3C2GO75747 1445 aa16.56■□□□□ 0.24
KARS-207ENST00000566560 SETD1AO15047 1707 aaKnown RBP16.56■□□□□ 0.24
KARS-207ENST00000566560 VGFO15240 615 aaPredicted RBP16.55■□□□□ 0.24
KARS-207ENST00000566560 MKRN4PQ13434 485 aaPredicted RBP16.55■□□□□ 0.24
KARS-207ENST00000566560 DCAF11Q8TEB1 546 aa16.55■□□□□ 0.24
KARS-207ENST00000566560 ADGRF5Q8IZF2 1346 aa16.54■□□□□ 0.24
KARS-207ENST00000566560 L3MBTL2Q969R5 705 aa16.54■□□□□ 0.24
KARS-207ENST00000566560 BCANQ96GW7 911 aa16.53■□□□□ 0.24
KARS-207ENST00000566560 ADAMTS13Q76LX8 1427 aa16.53■□□□□ 0.24
KARS-207ENST00000566560 PRAG1Q86YV5 1406 aa16.53■□□□□ 0.24
KARS-207ENST00000566560 KDM2AQ9Y2K7 1162 aa16.52■□□□□ 0.24
KARS-207ENST00000566560 ALKQ9UM73 1620 aa16.52■□□□□ 0.23
KARS-207ENST00000566560 KIAA1210Q9ULL0 1709 aa16.5■□□□□ 0.23
KARS-207ENST00000566560 STAC3Q96MF2 364 aa16.5■□□□□ 0.23
KARS-207ENST00000566560 ASXL1Q8IXJ9 1541 aa16.5■□□□□ 0.23
KARS-207ENST00000566560 TRPM1Q7Z4N2 1603 aa16.49■□□□□ 0.23
KARS-207ENST00000566560 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
KARS-207ENST00000566560 NWD1Q149M9 1564 aa16.47■□□□□ 0.23
KARS-207ENST00000566560 XRN1Q8IZH2 1706 aaKnown RBP16.46■□□□□ 0.23
KARS-207ENST00000566560 FKBP8Q14318 412 aa16.46■□□□□ 0.23
KARS-207ENST00000566560 TIMELESSQ9UNS1 1208 aa16.46■□□□□ 0.23
KARS-207ENST00000566560 CHD2O14647 1828 aaKnown RBP16.46■□□□□ 0.23
KARS-207ENST00000566560 KNDC1Q76NI1 1749 aa16.45■□□□□ 0.22
KARS-207ENST00000566560 STRCP1A6NGW2 1772 aa16.44■□□□□ 0.22
KARS-207ENST00000566560 ADGRB1O14514 1584 aa16.44■□□□□ 0.22
KARS-207ENST00000566560 PIK3R4Q99570 1358 aa16.44■□□□□ 0.22
KARS-207ENST00000566560 RALGAPBQ86X10 1494 aa16.43■□□□□ 0.22
KARS-207ENST00000566560 METP08581 1390 aa16.43■□□□□ 0.22
KARS-207ENST00000566560 TBX22Q9Y458 520 aa16.43■□□□□ 0.22
KARS-207ENST00000566560 CFAP70Q5T0N1 1121 aa16.42■□□□□ 0.22
KARS-207ENST00000566560 C14orf93Q9H972 538 aaKnown RBP16.42■□□□□ 0.22
KARS-207ENST00000566560 NKTRP30414 1462 aaKnown RBP16.42■□□□□ 0.22
KARS-207ENST00000566560 CPS1P31327 1500 aa16.4■□□□□ 0.22
KARS-207ENST00000566560 PTPRUQ92729 1446 aa16.4■□□□□ 0.22
KARS-207ENST00000566560 ZNF335Q9H4Z2 1342 aaPredicted RBP16.4■□□□□ 0.22
KARS-207ENST00000566560 ROCK2O75116 1388 aaKnown RBP16.39■□□□□ 0.21
KARS-207ENST00000566560 NBPF8Q3BBV2 869 aa16.39■□□□□ 0.21
KARS-207ENST00000566560 YTHDC2Q9H6S0 1430 aaKnown RBP16.38■□□□□ 0.21
KARS-207ENST00000566560 ARHGEF28Q8N1W1 1705 aaKnown RBP16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms