RNA–Protein interactions for RNA: ENST00000566333.1

CDH13-208, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-208ENST00000566333 MED14O60244 1454 aa12.02□□□□□ -0.49
CDH13-208ENST00000566333 RIMS2Q9UQ26 1411 aa12.01□□□□□ -0.49
CDH13-208ENST00000566333 SETBP1Q9Y6X0 1596 aa12.01□□□□□ -0.49
CDH13-208ENST00000566333 MYOM2P54296 1465 aa11.99□□□□□ -0.49
CDH13-208ENST00000566333 NRXN1Q9ULB1 1477 aa11.98□□□□□ -0.49
CDH13-208ENST00000566333 THEMISQ8N1K5 641 aaPredicted RBP11.98□□□□□ -0.49
CDH13-208ENST00000566333 DIP2AQ14689 1571 aa11.97□□□□□ -0.49
CDH13-208ENST00000566333 STRCP1A6NGW2 1772 aa11.97□□□□□ -0.49
CDH13-208ENST00000566333 LAMC1P11047 1609 aa11.97□□□□□ -0.49
CDH13-208ENST00000566333 LTKP29376 864 aa11.96□□□□□ -0.49
CDH13-208ENST00000566333 NPHP4O75161 1426 aaPredicted RBP11.95□□□□□ -0.5
CDH13-208ENST00000566333 PLEKHG1Q9ULL1 1385 aa11.95□□□□□ -0.5
CDH13-208ENST00000566333 CHGAP10645 457 aaKnown RBP11.95□□□□□ -0.5
CDH13-208ENST00000566333 STAG3Q9UJ98 1225 aa11.95□□□□□ -0.5
CDH13-208ENST00000566333 ASXL1Q8IXJ9 1541 aa11.95□□□□□ -0.5
CDH13-208ENST00000566333 PIK3C2GO75747 1445 aa11.94□□□□□ -0.5
CDH13-208ENST00000566333 ADAMTS13Q76LX8 1427 aa11.94□□□□□ -0.5
CDH13-208ENST00000566333 NCKAP5LQ9HCH0 1330 aa11.94□□□□□ -0.5
CDH13-208ENST00000566333 NWD1Q149M9 1564 aa11.94□□□□□ -0.5
CDH13-208ENST00000566333 SIN3AQ96ST3 1273 aa11.94□□□□□ -0.5
CDH13-208ENST00000566333 CHD2O14647 1828 aaKnown RBP11.94□□□□□ -0.5
CDH13-208ENST00000566333 KIAA1210Q9ULL0 1709 aa11.94□□□□□ -0.5
CDH13-208ENST00000566333 CLSPNQ9HAW4 1339 aa11.93□□□□□ -0.5
CDH13-208ENST00000566333 XRN1Q8IZH2 1706 aaKnown RBP11.93□□□□□ -0.5
CDH13-208ENST00000566333 ALKQ9UM73 1620 aa11.93□□□□□ -0.5
CDH13-208ENST00000566333 TRPM1Q7Z4N2 1603 aa11.92□□□□□ -0.5
CDH13-208ENST00000566333 KNDC1Q76NI1 1749 aa11.91□□□□□ -0.5
CDH13-208ENST00000566333 RPGRIP1LQ68CZ1 1315 aa11.91□□□□□ -0.5
CDH13-208ENST00000566333 ZNF326Q5BKZ1 582 aaKnown RBP11.91□□□□□ -0.5
CDH13-208ENST00000566333 ANKLE2Q86XL3 938 aa11.91□□□□□ -0.5
CDH13-208ENST00000566333 XIRP1Q702N8 1843 aaKnown RBP11.9□□□□□ -0.5
CDH13-208ENST00000566333 RGL3Q3MIN7 710 aa11.9□□□□□ -0.5
CDH13-208ENST00000566333 NUTM2DQ5VT03 806 aaPredicted RBP11.9□□□□□ -0.5
CDH13-208ENST00000566333 TXNDC2Q86VQ3 553 aa11.9□□□□□ -0.5
CDH13-208ENST00000566333 ADGRF5Q8IZF2 1346 aa11.89□□□□□ -0.51
CDH13-208ENST00000566333 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
CDH13-208ENST00000566333 PRAG1Q86YV5 1406 aa11.89□□□□□ -0.51
CDH13-208ENST00000566333 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.89□□□□□ -0.51
CDH13-208ENST00000566333 EID1Q9Y6B2 187 aa11.89□□□□□ -0.51
CDH13-208ENST00000566333 LTBP4Q8N2S1 1624 aa11.89□□□□□ -0.51
CDH13-208ENST00000566333 PPP1R15AO75807 674 aaPredicted RBP11.87□□□□□ -0.51
CDH13-208ENST00000566333 NEUROD1Q13562 356 aa11.87□□□□□ -0.51
CDH13-208ENST00000566333 CCER1Q8TC90 406 aaPredicted RBP11.87□□□□□ -0.51
CDH13-208ENST00000566333 ARHGEF28Q8N1W1 1705 aaKnown RBP11.86□□□□□ -0.51
CDH13-208ENST00000566333 L3MBTL2Q969R5 705 aa11.86□□□□□ -0.51
CDH13-208ENST00000566333 CPS1P31327 1500 aa11.86□□□□□ -0.51
CDH13-208ENST00000566333 PTPRUQ92729 1446 aa11.86□□□□□ -0.51
CDH13-208ENST00000566333 TONSLQ96HA7 1378 aa11.85□□□□□ -0.51
CDH13-208ENST00000566333 NKTRP30414 1462 aaKnown RBP11.84□□□□□ -0.51
CDH13-208ENST00000566333 METP08581 1390 aa11.84□□□□□ -0.51
CDH13-208ENST00000566333 VGFO15240 615 aaPredicted RBP11.84□□□□□ -0.51
CDH13-208ENST00000566333 HDGFP51858 240 aaKnown RBP11.84□□□□□ -0.51
CDH13-208ENST00000566333 DCAF11Q8TEB1 546 aa11.84□□□□□ -0.51
CDH13-208ENST00000566333 RALGAPBQ86X10 1494 aa11.83□□□□□ -0.52
CDH13-208ENST00000566333 NALCNQ8IZF0 1738 aa11.83□□□□□ -0.52
CDH13-208ENST00000566333 PIK3R4Q99570 1358 aa11.83□□□□□ -0.52
CDH13-208ENST00000566333 SLC26A8Q96RN1 970 aa11.83□□□□□ -0.52
CDH13-208ENST00000566333 DMRT2Q9Y5R5 561 aa11.82□□□□□ -0.52
CDH13-208ENST00000566333 TECPR2O15040 1411 aa11.82□□□□□ -0.52
CDH13-208ENST00000566333 ZNF335Q9H4Z2 1342 aaPredicted RBP11.82□□□□□ -0.52
CDH13-208ENST00000566333 PTCH1Q13635 1447 aa11.81□□□□□ -0.52
CDH13-208ENST00000566333 STAC3Q96MF2 364 aa11.81□□□□□ -0.52
CDH13-208ENST00000566333 TBX22Q9Y458 520 aa11.81□□□□□ -0.52
CDH13-208ENST00000566333 KDM2AQ9Y2K7 1162 aa11.8□□□□□ -0.52
CDH13-208ENST00000566333 LRRC7Q96NW7 1537 aa11.8□□□□□ -0.52
CDH13-208ENST00000566333 DLC1Q96QB1 1528 aa11.8□□□□□ -0.52
CDH13-208ENST00000566333 C14orf93Q9H972 538 aaKnown RBP11.79□□□□□ -0.52
CDH13-208ENST00000566333 YTHDC2Q9H6S0 1430 aaKnown RBP11.78□□□□□ -0.52
CDH13-208ENST00000566333 NBPF8Q3BBV2 869 aa11.78□□□□□ -0.52
CDH13-208ENST00000566333 CFAP70Q5T0N1 1121 aa11.78□□□□□ -0.52
CDH13-208ENST00000566333 GPRASP1Q5JY77 1395 aa11.78□□□□□ -0.52
CDH13-208ENST00000566333 QRICH2Q9H0J4 1663 aa11.78□□□□□ -0.52
CDH13-208ENST00000566333 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.77□□□□□ -0.52
CDH13-208ENST00000566333 BCANQ96GW7 911 aa11.77□□□□□ -0.53
CDH13-208ENST00000566333 LRPPRCP42704 1394 aaKnown RBP11.77□□□□□ -0.53
CDH13-208ENST00000566333 TIMELESSQ9UNS1 1208 aa11.76□□□□□ -0.53
CDH13-208ENST00000566333 ROBO2Q9HCK4 1378 aa11.76□□□□□ -0.53
CDH13-208ENST00000566333 ADGRB2O60241 1585 aa11.75□□□□□ -0.53
CDH13-208ENST00000566333 KCNA6P17658 529 aa11.75□□□□□ -0.53
CDH13-208ENST00000566333 IQSEC2Q5JU85 1478 aa11.75□□□□□ -0.53
CDH13-208ENST00000566333 NBPF1Q3BBV0 1214 aa11.74□□□□□ -0.53
CDH13-208ENST00000566333 TMEM132EQ6IEE7 984 aa11.74□□□□□ -0.53
CDH13-208ENST00000566333 ABCC11Q96J66 1382 aa11.74□□□□□ -0.53
CDH13-208ENST00000566333 CDC42BPGQ6DT37 1551 aa11.74□□□□□ -0.53
CDH13-208ENST00000566333 ROCK2O75116 1388 aaKnown RBP11.73□□□□□ -0.53
CDH13-208ENST00000566333 FAM135BQ49AJ0 1406 aa11.73□□□□□ -0.53
CDH13-208ENST00000566333 FMN2Q9NZ56 1722 aa11.72□□□□□ -0.53
CDH13-208ENST00000566333 ADGRL3Q9HAR2 1447 aa11.72□□□□□ -0.53
CDH13-208ENST00000566333 PLEKHH1Q9ULM0 1364 aa11.72□□□□□ -0.53
CDH13-208ENST00000566333 AMOTL2Q9Y2J4 779 aa11.72□□□□□ -0.53
CDH13-208ENST00000566333 TMEM94Q12767 1356 aa11.71□□□□□ -0.53
CDH13-208ENST00000566333 NCOA3Q9Y6Q9 1424 aa11.7□□□□□ -0.54
CDH13-208ENST00000566333 RGPD8O14715 1765 aaPredicted RBP11.69□□□□□ -0.54
CDH13-208ENST00000566333 TOPAZ1Q8N9V7 1692 aa11.69□□□□□ -0.54
CDH13-208ENST00000566333 USP32Q8NFA0 1604 aa11.69□□□□□ -0.54
CDH13-208ENST00000566333 DCCP43146 1447 aa11.69□□□□□ -0.54
CDH13-208ENST00000566333 STK26Q9P289 416 aa11.68□□□□□ -0.54
CDH13-208ENST00000566333 TULP4Q9NRJ4 1543 aa11.68□□□□□ -0.54
CDH13-208ENST00000566333 RBM33Q96EV2 1170 aaKnown RBP11.67□□□□□ -0.54
CDH13-208ENST00000566333 ITSN1Q15811 1721 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms