RNA–Protein interactions for RNA: ENST00000566095.6

SF3B3-207, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 3

Gene SF3B3, Length 453 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-207ENST00000566095 PRAG1Q86YV5 1406 aa13.89□□□□□ -0.19
SF3B3-207ENST00000566095 CEBPAP49715 358 aaPredicted RBP13.88□□□□□ -0.19
SF3B3-207ENST00000566095 EID1Q9Y6B2 187 aa13.88□□□□□ -0.19
SF3B3-207ENST00000566095 RALGAPBQ86X10 1494 aa13.87□□□□□ -0.19
SF3B3-207ENST00000566095 MYO3AQ8NEV4 1616 aa13.87□□□□□ -0.19
SF3B3-207ENST00000566095 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
SF3B3-207ENST00000566095 IFT172Q9UG01 1749 aa13.87□□□□□ -0.19
SF3B3-207ENST00000566095 PPLO60437 1756 aa13.86□□□□□ -0.19
SF3B3-207ENST00000566095 ROCK2O75116 1388 aaKnown RBP13.85□□□□□ -0.19
SF3B3-207ENST00000566095 KIAA1210Q9ULL0 1709 aa13.85□□□□□ -0.19
SF3B3-207ENST00000566095 LAMC1P11047 1609 aa13.85□□□□□ -0.19
SF3B3-207ENST00000566095 ZNF142P52746 1687 aaPredicted RBP13.85□□□□□ -0.19
SF3B3-207ENST00000566095 NEXMIFQ5QGS0 1516 aa13.85□□□□□ -0.19
SF3B3-207ENST00000566095 CEP170BQ9Y4F5 1589 aaPredicted RBP13.84□□□□□ -0.19
SF3B3-207ENST00000566095 RIMS2Q9UQ26 1411 aa13.84□□□□□ -0.19
SF3B3-207ENST00000566095 EIF4G2P78344 907 aaKnown RBP eCLIP13.84□□□□□ -0.19
SF3B3-207ENST00000566095 NRXN1Q9ULB1 1477 aa13.84□□□□□ -0.19
SF3B3-207ENST00000566095 UBR1Q8IWV7 1749 aa13.84□□□□□ -0.19
SF3B3-207ENST00000566095 TMEM2Q9UHN6 1383 aa13.83□□□□□ -0.19
SF3B3-207ENST00000566095 SLC24A1O60721 1099 aa13.83□□□□□ -0.2
SF3B3-207ENST00000566095 EIF3AQ14152 1382 aaKnown RBP13.83□□□□□ -0.2
SF3B3-207ENST00000566095 CARD11Q9BXL7 1154 aa13.82□□□□□ -0.2
SF3B3-207ENST00000566095 PIK3C2GO75747 1445 aa13.81□□□□□ -0.2
SF3B3-207ENST00000566095 SLIT1O75093 1534 aa13.81□□□□□ -0.2
SF3B3-207ENST00000566095 NBPF8Q3BBV2 869 aa13.81□□□□□ -0.2
SF3B3-207ENST00000566095 TRPM1Q7Z4N2 1603 aa13.81□□□□□ -0.2
SF3B3-207ENST00000566095 GPRASP1Q5JY77 1395 aa13.81□□□□□ -0.2
SF3B3-207ENST00000566095 MYO5BQ9ULV0 1848 aa13.8□□□□□ -0.2
SF3B3-207ENST00000566095 SETBP1Q9Y6X0 1596 aa13.79□□□□□ -0.2
SF3B3-207ENST00000566095 ADGRF5Q8IZF2 1346 aa13.79□□□□□ -0.2
SF3B3-207ENST00000566095 ANKLE2Q86XL3 938 aa13.78□□□□□ -0.2
SF3B3-207ENST00000566095 BCANQ96GW7 911 aa13.78□□□□□ -0.2
SF3B3-207ENST00000566095 C14orf93Q9H972 538 aaKnown RBP13.78□□□□□ -0.2
SF3B3-207ENST00000566095 PLEKHG1Q9ULL1 1385 aa13.78□□□□□ -0.2
SF3B3-207ENST00000566095 ARHGAP23Q9P227 1491 aa13.78□□□□□ -0.2
SF3B3-207ENST00000566095 TXNDC2Q86VQ3 553 aa13.77□□□□□ -0.21
SF3B3-207ENST00000566095 SCAF11Q99590 1463 aaKnown RBP13.77□□□□□ -0.21
SF3B3-207ENST00000566095 USP47Q96K76 1375 aa13.76□□□□□ -0.21
SF3B3-207ENST00000566095 KDM4FA0A1W2PPD8 638 aa13.75□□□□□ -0.21
SF3B3-207ENST00000566095 DIP2AQ14689 1571 aa13.75□□□□□ -0.21
SF3B3-207ENST00000566095 DIEXFQ68CQ4 756 aaKnown RBP13.74□□□□□ -0.21
SF3B3-207ENST00000566095 CFAP70Q5T0N1 1121 aa13.73□□□□□ -0.21
SF3B3-207ENST00000566095 HSPA5P11021 654 aaKnown RBP13.72□□□□□ -0.21
SF3B3-207ENST00000566095 CDCA8Q53HL2 280 aa13.72□□□□□ -0.21
SF3B3-207ENST00000566095 NUTM2DQ5VT03 806 aaPredicted RBP13.72□□□□□ -0.21
SF3B3-207ENST00000566095 ALKQ9UM73 1620 aa13.72□□□□□ -0.21
SF3B3-207ENST00000566095 NBPF1Q3BBV0 1214 aa13.7□□□□□ -0.22
SF3B3-207ENST00000566095 PIK3R4Q99570 1358 aa13.7□□□□□ -0.22
SF3B3-207ENST00000566095 TBX22Q9Y458 520 aa13.69□□□□□ -0.22
SF3B3-207ENST00000566095 IQGAP1P46940 1657 aa13.69□□□□□ -0.22
SF3B3-207ENST00000566095 ADGRB1O14514 1584 aa13.68□□□□□ -0.22
SF3B3-207ENST00000566095 POLR1AO95602 1720 aaPredicted RBP13.67□□□□□ -0.22
SF3B3-207ENST00000566095 YTHDC2Q9H6S0 1430 aaKnown RBP13.67□□□□□ -0.22
SF3B3-207ENST00000566095 LTKP29376 864 aa13.67□□□□□ -0.22
SF3B3-207ENST00000566095 TMF1P82094 1093 aa13.67□□□□□ -0.22
SF3B3-207ENST00000566095 LRPPRCP42704 1394 aaKnown RBP13.67□□□□□ -0.22
SF3B3-207ENST00000566095 MED14O60244 1454 aa13.67□□□□□ -0.22
SF3B3-207ENST00000566095 CENPJQ9HC77 1338 aaPredicted RBP13.66□□□□□ -0.22
SF3B3-207ENST00000566095 NPHP4O75161 1426 aaPredicted RBP13.66□□□□□ -0.22
SF3B3-207ENST00000566095 DLC1Q96QB1 1528 aa13.66□□□□□ -0.22
SF3B3-207ENST00000566095 SIRT1Q96EB6 747 aa13.66□□□□□ -0.22
SF3B3-207ENST00000566095 SBNO2Q9Y2G9 1366 aa13.66□□□□□ -0.22
SF3B3-207ENST00000566095 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
SF3B3-207ENST00000566095 ABCC11Q96J66 1382 aa13.65□□□□□ -0.22
SF3B3-207ENST00000566095 NRXN3Q9Y4C0 1643 aa13.64□□□□□ -0.23
SF3B3-207ENST00000566095 POGKQ9P215 609 aa13.64□□□□□ -0.23
SF3B3-207ENST00000566095 ADAMTS13Q76LX8 1427 aa13.64□□□□□ -0.23
SF3B3-207ENST00000566095 TMEM132EQ6IEE7 984 aa13.63□□□□□ -0.23
SF3B3-207ENST00000566095 TRAK1Q9UPV9 953 aa13.63□□□□□ -0.23
SF3B3-207ENST00000566095 DMRT2Q9Y5R5 561 aa13.63□□□□□ -0.23
SF3B3-207ENST00000566095 KNDC1Q76NI1 1749 aa13.63□□□□□ -0.23
SF3B3-207ENST00000566095 TECPR2O15040 1411 aa13.63□□□□□ -0.23
SF3B3-207ENST00000566095 FAM135BQ49AJ0 1406 aa13.63□□□□□ -0.23
SF3B3-207ENST00000566095 LMTK3Q96Q04 1460 aa13.62□□□□□ -0.23
SF3B3-207ENST00000566095 SETD1AO15047 1707 aaKnown RBP13.62□□□□□ -0.23
SF3B3-207ENST00000566095 STK26Q9P289 416 aa13.61□□□□□ -0.23
SF3B3-207ENST00000566095 CPS1P31327 1500 aa13.6□□□□□ -0.23
SF3B3-207ENST00000566095 ASXL1Q8IXJ9 1541 aa13.6□□□□□ -0.23
SF3B3-207ENST00000566095 PTCH1Q13635 1447 aa13.6□□□□□ -0.23
SF3B3-207ENST00000566095 SLC26A8Q96RN1 970 aa13.6□□□□□ -0.23
SF3B3-207ENST00000566095 EVC2Q86UK5 1308 aa13.6□□□□□ -0.23
SF3B3-207ENST00000566095 METP08581 1390 aa13.59□□□□□ -0.23
SF3B3-207ENST00000566095 ARHGEF28Q8N1W1 1705 aaKnown RBP13.59□□□□□ -0.23
SF3B3-207ENST00000566095 PUS7Q96PZ0 661 aaKnown RBP13.59□□□□□ -0.23
SF3B3-207ENST00000566095 CCDC7Q96M83 1385 aa13.58□□□□□ -0.23
SF3B3-207ENST00000566095 NCKAP5LQ9HCH0 1330 aa13.58□□□□□ -0.24
SF3B3-207ENST00000566095 QRICH2Q9H0J4 1663 aa13.57□□□□□ -0.24
SF3B3-207ENST00000566095 PRAM1Q96QH2 718 aa13.57□□□□□ -0.24
SF3B3-207ENST00000566095 TESK2Q96S53 571 aa13.57□□□□□ -0.24
SF3B3-207ENST00000566095 HIRIP3Q9BW71 556 aaPredicted RBP13.57□□□□□ -0.24
SF3B3-207ENST00000566095 SENP3Q9H4L4 574 aaPredicted RBP13.57□□□□□ -0.24
SF3B3-207ENST00000566095 AMOTL2Q9Y2J4 779 aa13.57□□□□□ -0.24
SF3B3-207ENST00000566095 NINLQ9Y2I6 1382 aa13.56□□□□□ -0.24
SF3B3-207ENST00000566095 KCNA6P17658 529 aa13.55□□□□□ -0.24
SF3B3-207ENST00000566095 NKTRP30414 1462 aaKnown RBP13.55□□□□□ -0.24
SF3B3-207ENST00000566095 HSPA2P54652 639 aa13.54□□□□□ -0.24
SF3B3-207ENST00000566095 POLR3GLQ9BT43 218 aa13.54□□□□□ -0.24
SF3B3-207ENST00000566095 KIF7Q2M1P5 1343 aa13.54□□□□□ -0.24
SF3B3-207ENST00000566095 ATAD2Q6PL18 1390 aa13.54□□□□□ -0.24
SF3B3-207ENST00000566095 XRN1Q8IZH2 1706 aaKnown RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms