RNA–Protein interactions for RNA: ENST00000565931.1

RNF40-207, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-207ENST00000565931 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.22■■□□□ 1.47
RNF40-207ENST00000565931 CCER1Q8TC90 406 aaPredicted RBP24.22■■□□□ 1.47
RNF40-207ENST00000565931 NEURL4Q96JN8 1562 aa24.21■■□□□ 1.47
RNF40-207ENST00000565931 NEUROD1Q13562 356 aa24.21■■□□□ 1.47
RNF40-207ENST00000565931 CLSPNQ9HAW4 1339 aa24.2■■□□□ 1.46
RNF40-207ENST00000565931 NUTM2DQ5VT03 806 aaPredicted RBP24.2■■□□□ 1.46
RNF40-207ENST00000565931 SCAF11Q99590 1463 aaKnown RBP24.19■■□□□ 1.46
RNF40-207ENST00000565931 KIF1BO60333 1816 aa24.18■■□□□ 1.46
RNF40-207ENST00000565931 PPP1R15AO75807 674 aaPredicted RBP24.16■■□□□ 1.46
RNF40-207ENST00000565931 NEXMIFQ5QGS0 1516 aa24.15■■□□□ 1.46
RNF40-207ENST00000565931 MED14O60244 1454 aa24.15■■□□□ 1.46
RNF40-207ENST00000565931 MYO5BQ9ULV0 1848 aa24.14■■□□□ 1.46
RNF40-207ENST00000565931 VGFO15240 615 aaPredicted RBP24.14■■□□□ 1.45
RNF40-207ENST00000565931 NPHP4O75161 1426 aaPredicted RBP24.14■■□□□ 1.45
RNF40-207ENST00000565931 DMRT2Q9Y5R5 561 aa24.14■■□□□ 1.45
RNF40-207ENST00000565931 STRCQ7RTU9 1775 aa24.12■■□□□ 1.45
RNF40-207ENST00000565931 PLEKHG1Q9ULL1 1385 aa24.12■■□□□ 1.45
RNF40-207ENST00000565931 DCAF11Q8TEB1 546 aa24.1■■□□□ 1.45
RNF40-207ENST00000565931 L3MBTL2Q969R5 705 aa24.1■■□□□ 1.45
RNF40-207ENST00000565931 ADGRF5Q8IZF2 1346 aa24.1■■□□□ 1.45
RNF40-207ENST00000565931 STAC3Q96MF2 364 aa24.09■■□□□ 1.45
RNF40-207ENST00000565931 BCANQ96GW7 911 aa24.08■■□□□ 1.45
RNF40-207ENST00000565931 SENP3Q9H4L4 574 aaPredicted RBP24.08■■□□□ 1.45
RNF40-207ENST00000565931 KDM2AQ9Y2K7 1162 aa24.08■■□□□ 1.45
RNF40-207ENST00000565931 SLC26A8Q96RN1 970 aa24.05■■□□□ 1.44
RNF40-207ENST00000565931 MYOM2P54296 1465 aa24.05■■□□□ 1.44
RNF40-207ENST00000565931 POLR1AO95602 1720 aaPredicted RBP24.04■■□□□ 1.44
RNF40-207ENST00000565931 TONSLQ96HA7 1378 aa24.03■■□□□ 1.44
RNF40-207ENST00000565931 ADAMTS13Q76LX8 1427 aa24.03■■□□□ 1.44
RNF40-207ENST00000565931 TBX22Q9Y458 520 aa24.03■■□□□ 1.44
RNF40-207ENST00000565931 PPLO60437 1756 aa24.03■■□□□ 1.44
RNF40-207ENST00000565931 NRXN1Q9ULB1 1477 aa24.01■■□□□ 1.43
RNF40-207ENST00000565931 IQGAP1P46940 1657 aa24■■□□□ 1.43
RNF40-207ENST00000565931 IFT172Q9UG01 1749 aa24■■□□□ 1.43
RNF40-207ENST00000565931 SETBP1Q9Y6X0 1596 aa23.99■■□□□ 1.43
RNF40-207ENST00000565931 TIMELESSQ9UNS1 1208 aa23.99■■□□□ 1.43
RNF40-207ENST00000565931 PIK3C2GO75747 1445 aa23.99■■□□□ 1.43
RNF40-207ENST00000565931 C14orf93Q9H972 538 aaKnown RBP23.97■■□□□ 1.43
RNF40-207ENST00000565931 CFAP70Q5T0N1 1121 aa23.95■■□□□ 1.42
RNF40-207ENST00000565931 NRXN3Q9Y4C0 1643 aa23.95■■□□□ 1.42
RNF40-207ENST00000565931 METP08581 1390 aa23.93■■□□□ 1.42
RNF40-207ENST00000565931 PRAG1Q86YV5 1406 aa23.93■■□□□ 1.42
RNF40-207ENST00000565931 ALKQ9UM73 1620 aa23.92■■□□□ 1.42
RNF40-207ENST00000565931 ZNF335Q9H4Z2 1342 aaPredicted RBP23.92■■□□□ 1.42
RNF40-207ENST00000565931 PIK3R4Q99570 1358 aa23.91■■□□□ 1.42
RNF40-207ENST00000565931 DIP2AQ14689 1571 aa23.91■■□□□ 1.42
RNF40-207ENST00000565931 KCNA6P17658 529 aa23.9■■□□□ 1.42
RNF40-207ENST00000565931 NBPF8Q3BBV2 869 aa23.9■■□□□ 1.42
RNF40-207ENST00000565931 PTPRUQ92729 1446 aa23.87■■□□□ 1.41
RNF40-207ENST00000565931 TMEM132EQ6IEE7 984 aa23.87■■□□□ 1.41
RNF40-207ENST00000565931 AMOTL2Q9Y2J4 779 aa23.86■■□□□ 1.41
RNF40-207ENST00000565931 NBPF1Q3BBV0 1214 aa23.83■■□□□ 1.41
RNF40-207ENST00000565931 ASXL1Q8IXJ9 1541 aa23.83■■□□□ 1.41
RNF40-207ENST00000565931 SETD1AO15047 1707 aaKnown RBP23.82■■□□□ 1.4
RNF40-207ENST00000565931 LRPPRCP42704 1394 aaKnown RBP23.81■■□□□ 1.4
RNF40-207ENST00000565931 ADGRB1O14514 1584 aa23.8■■□□□ 1.4
RNF40-207ENST00000565931 STK26Q9P289 416 aa23.8■■□□□ 1.4
RNF40-207ENST00000565931 LTBP4Q8N2S1 1624 aa23.8■■□□□ 1.4
RNF40-207ENST00000565931 NWD1Q149M9 1564 aa23.79■■□□□ 1.4
RNF40-207ENST00000565931 LAMC1P11047 1609 aa23.79■■□□□ 1.4
RNF40-207ENST00000565931 ABCC11Q96J66 1382 aa23.78■■□□□ 1.4
RNF40-207ENST00000565931 YTHDC2Q9H6S0 1430 aaKnown RBP23.78■■□□□ 1.4
RNF40-207ENST00000565931 CPS1P31327 1500 aa23.76■■□□□ 1.39
RNF40-207ENST00000565931 PROSER2Q86WR7 435 aaPredicted RBP23.76■■□□□ 1.39
RNF40-207ENST00000565931 NKTRP30414 1462 aaKnown RBP23.75■■□□□ 1.39
RNF40-207ENST00000565931 TECPR2O15040 1411 aa23.75■■□□□ 1.39
RNF40-207ENST00000565931 KIAA1210Q9ULL0 1709 aa23.74■■□□□ 1.39
RNF40-207ENST00000565931 SIRT1Q96EB6 747 aa23.74■■□□□ 1.39
RNF40-207ENST00000565931 CHD2O14647 1828 aaKnown RBP23.74■■□□□ 1.39
RNF40-207ENST00000565931 ROCK2O75116 1388 aaKnown RBP23.74■■□□□ 1.39
RNF40-207ENST00000565931 ROBO2Q9HCK4 1378 aa23.74■■□□□ 1.39
RNF40-207ENST00000565931 STRCP1A6NGW2 1772 aa23.73■■□□□ 1.39
RNF40-207ENST00000565931 TRAK1Q9UPV9 953 aa23.73■■□□□ 1.39
RNF40-207ENST00000565931 GPRASP1Q5JY77 1395 aa23.73■■□□□ 1.39
RNF40-207ENST00000565931 RALGAPBQ86X10 1494 aa23.73■■□□□ 1.39
RNF40-207ENST00000565931 LRRC7Q96NW7 1537 aa23.73■■□□□ 1.39
RNF40-207ENST00000565931 XRN1Q8IZH2 1706 aaKnown RBP23.73■■□□□ 1.39
RNF40-207ENST00000565931 RBM33Q96EV2 1170 aaKnown RBP23.72■■□□□ 1.39
RNF40-207ENST00000565931 PTCH1Q13635 1447 aa23.72■■□□□ 1.39
RNF40-207ENST00000565931 TRPM1Q7Z4N2 1603 aa23.71■■□□□ 1.39
RNF40-207ENST00000565931 TMEM94Q12767 1356 aa23.71■■□□□ 1.39
RNF40-207ENST00000565931 WAPLQ7Z5K2 1190 aa23.69■■□□□ 1.38
RNF40-207ENST00000565931 CERKQ8TCT0 537 aa23.69■■□□□ 1.38
RNF40-207ENST00000565931 CARD11Q9BXL7 1154 aa23.69■■□□□ 1.38
RNF40-207ENST00000565931 FAM135BQ49AJ0 1406 aa23.67■■□□□ 1.38
RNF40-207ENST00000565931 NCOA3Q9Y6Q9 1424 aa23.67■■□□□ 1.38
RNF40-207ENST00000565931 PLEKHH1Q9ULM0 1364 aa23.66■■□□□ 1.38
RNF40-207ENST00000565931 DLC1Q96QB1 1528 aa23.66■■□□□ 1.38
RNF40-207ENST00000565931 PRAM1Q96QH2 718 aa23.66■■□□□ 1.38
RNF40-207ENST00000565931 POGKQ9P215 609 aa23.64■■□□□ 1.37
RNF40-207ENST00000565931 KNDC1Q76NI1 1749 aa23.62■■□□□ 1.37
RNF40-207ENST00000565931 C14orf37Q86TY3 774 aa23.61■■□□□ 1.37
RNF40-207ENST00000565931 SAFB2Q14151 953 aaKnown RBP eCLIP23.6■■□□□ 1.37
RNF40-207ENST00000565931 C19orf44Q9H6X5 657 aa23.6■■□□□ 1.37
RNF40-207ENST00000565931 IQSEC2Q5JU85 1478 aa23.59■■□□□ 1.37
RNF40-207ENST00000565931 ADGRL3Q9HAR2 1447 aa23.58■■□□□ 1.36
RNF40-207ENST00000565931 CENPJQ9HC77 1338 aaPredicted RBP23.58■■□□□ 1.36
RNF40-207ENST00000565931 MSH6P52701 1360 aa23.57■■□□□ 1.36
RNF40-207ENST00000565931 ZEB1P37275 1124 aaPredicted RBP23.57■■□□□ 1.36
RNF40-207ENST00000565931 EIF3AQ14152 1382 aaKnown RBP23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms