RNA–Protein interactions for RNA: ENST00000565848.1

NR4A1-221, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 2

Gene NR4A1, Length 691 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-221ENST00000565848 MYO3AQ8NEV4 1616 aa18.15■□□□□ 0.5
NR4A1-221ENST00000565848 SPATA31E1Q6ZUB1 1445 aa18.15■□□□□ 0.5
NR4A1-221ENST00000565848 ZNF142P52746 1687 aaPredicted RBP18.14■□□□□ 0.49
NR4A1-221ENST00000565848 TNRQ92752 1358 aa18.14■□□□□ 0.49
NR4A1-221ENST00000565848 KIF1BO60333 1816 aa18.14■□□□□ 0.49
NR4A1-221ENST00000565848 NLRP1Q9C000 1473 aa18.14■□□□□ 0.49
NR4A1-221ENST00000565848 SLC52A1Q9NWF4 448 aa18.13■□□□□ 0.49
NR4A1-221ENST00000565848 THEMISQ8N1K5 641 aaPredicted RBP18.12■□□□□ 0.49
NR4A1-221ENST00000565848 A2ML1A8K2U0 1454 aa18.12■□□□□ 0.49
NR4A1-221ENST00000565848 SIN3AQ96ST3 1273 aa18.11■□□□□ 0.49
NR4A1-221ENST00000565848 UBR1Q8IWV7 1749 aa18.11■□□□□ 0.49
NR4A1-221ENST00000565848 IDI1Q13907 227 aa18.1■□□□□ 0.49
NR4A1-221ENST00000565848 MYO5BQ9ULV0 1848 aa18.09■□□□□ 0.49
NR4A1-221ENST00000565848 IFT172Q9UG01 1749 aa18.09■□□□□ 0.49
NR4A1-221ENST00000565848 CPS1P31327 1500 aa18.09■□□□□ 0.49
NR4A1-221ENST00000565848 TIMELESSQ9UNS1 1208 aa18.05■□□□□ 0.48
NR4A1-221ENST00000565848 PPLO60437 1756 aa18.04■□□□□ 0.48
NR4A1-221ENST00000565848 RGS17Q9UGC6 210 aaPredicted RBP18.04■□□□□ 0.48
NR4A1-221ENST00000565848 NEXMIFQ5QGS0 1516 aa18.03■□□□□ 0.48
NR4A1-221ENST00000565848 NPHP4O75161 1426 aaPredicted RBP18.03■□□□□ 0.48
NR4A1-221ENST00000565848 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
NR4A1-221ENST00000565848 SLIT1O75093 1534 aa18.02■□□□□ 0.47
NR4A1-221ENST00000565848 ZFYVE9O95405 1425 aa18■□□□□ 0.47
NR4A1-221ENST00000565848 NEUROD1Q13562 356 aa17.99■□□□□ 0.47
NR4A1-221ENST00000565848 MYOM2P54296 1465 aa17.99■□□□□ 0.47
NR4A1-221ENST00000565848 NRXN1Q9ULB1 1477 aa17.99■□□□□ 0.47
NR4A1-221ENST00000565848 RPGRIP1LQ68CZ1 1315 aa17.98■□□□□ 0.47
NR4A1-221ENST00000565848 L3MBTL2Q969R5 705 aa17.97■□□□□ 0.47
NR4A1-221ENST00000565848 TONSLQ96HA7 1378 aa17.96■□□□□ 0.47
NR4A1-221ENST00000565848 TMEM2Q9UHN6 1383 aa17.95■□□□□ 0.46
NR4A1-221ENST00000565848 POTEAQ6S8J7 498 aa17.95■□□□□ 0.46
NR4A1-221ENST00000565848 STAC3Q96MF2 364 aa17.95■□□□□ 0.46
NR4A1-221ENST00000565848 LRRC7Q96NW7 1537 aa17.93■□□□□ 0.46
NR4A1-221ENST00000565848 ALKQ9UM73 1620 aa17.93■□□□□ 0.46
NR4A1-221ENST00000565848 RIMS2Q9UQ26 1411 aa17.92■□□□□ 0.46
NR4A1-221ENST00000565848 PPP1R15AO75807 674 aaPredicted RBP17.91■□□□□ 0.46
NR4A1-221ENST00000565848 RGL3Q3MIN7 710 aa17.91■□□□□ 0.46
NR4A1-221ENST00000565848 NRXN3Q9Y4C0 1643 aa17.9■□□□□ 0.46
NR4A1-221ENST00000565848 PIK3C2GO75747 1445 aa17.9■□□□□ 0.46
NR4A1-221ENST00000565848 PRAG1Q86YV5 1406 aa17.9■□□□□ 0.46
NR4A1-221ENST00000565848 MED14O60244 1454 aa17.9■□□□□ 0.46
NR4A1-221ENST00000565848 KIAA1210Q9ULL0 1709 aa17.9■□□□□ 0.46
NR4A1-221ENST00000565848 TXNDC2Q86VQ3 553 aa17.9■□□□□ 0.46
NR4A1-221ENST00000565848 POLR1AO95602 1720 aaPredicted RBP17.89■□□□□ 0.46
NR4A1-221ENST00000565848 SETBP1Q9Y6X0 1596 aa17.89■□□□□ 0.45
NR4A1-221ENST00000565848 CHGAP10645 457 aaKnown RBP17.89■□□□□ 0.45
NR4A1-221ENST00000565848 ZEB1P37275 1124 aaPredicted RBP17.89■□□□□ 0.45
NR4A1-221ENST00000565848 TRPM1Q7Z4N2 1603 aa17.89■□□□□ 0.45
NR4A1-221ENST00000565848 SETD1AO15047 1707 aaKnown RBP17.89■□□□□ 0.45
NR4A1-221ENST00000565848 DCAF11Q8TEB1 546 aa17.88■□□□□ 0.45
NR4A1-221ENST00000565848 STAG3Q9UJ98 1225 aa17.87■□□□□ 0.45
NR4A1-221ENST00000565848 ADGRF5Q8IZF2 1346 aa17.87■□□□□ 0.45
NR4A1-221ENST00000565848 SCAF11Q99590 1463 aaKnown RBP17.87■□□□□ 0.45
NR4A1-221ENST00000565848 LAMC1P11047 1609 aa17.87■□□□□ 0.45
NR4A1-221ENST00000565848 LTKP29376 864 aa17.86■□□□□ 0.45
NR4A1-221ENST00000565848 ZNF326Q5BKZ1 582 aaKnown RBP17.86■□□□□ 0.45
NR4A1-221ENST00000565848 RBM33Q96EV2 1170 aaKnown RBP17.86■□□□□ 0.45
NR4A1-221ENST00000565848 VGFO15240 615 aaPredicted RBP17.85■□□□□ 0.45
NR4A1-221ENST00000565848 IQGAP1P46940 1657 aa17.85■□□□□ 0.45
NR4A1-221ENST00000565848 NBPF8Q3BBV2 869 aa17.85■□□□□ 0.45
NR4A1-221ENST00000565848 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.85■□□□□ 0.45
NR4A1-221ENST00000565848 PLEKHG1Q9ULL1 1385 aa17.84■□□□□ 0.45
NR4A1-221ENST00000565848 EID1Q9Y6B2 187 aa17.84■□□□□ 0.45
NR4A1-221ENST00000565848 RALGAPBQ86X10 1494 aa17.83■□□□□ 0.45
NR4A1-221ENST00000565848 ADAMTS13Q76LX8 1427 aa17.81■□□□□ 0.44
NR4A1-221ENST00000565848 ADGRB1O14514 1584 aa17.81■□□□□ 0.44
NR4A1-221ENST00000565848 DIP2AQ14689 1571 aa17.81■□□□□ 0.44
NR4A1-221ENST00000565848 ASXL1Q8IXJ9 1541 aa17.81■□□□□ 0.44
NR4A1-221ENST00000565848 GPRASP1Q5JY77 1395 aa17.8■□□□□ 0.44
NR4A1-221ENST00000565848 HDGFP51858 240 aaKnown RBP17.8■□□□□ 0.44
NR4A1-221ENST00000565848 PROSER2Q86WR7 435 aaPredicted RBP17.8■□□□□ 0.44
NR4A1-221ENST00000565848 KDM2AQ9Y2K7 1162 aa17.8■□□□□ 0.44
NR4A1-221ENST00000565848 STRCP1A6NGW2 1772 aa17.79■□□□□ 0.44
NR4A1-221ENST00000565848 NUTM2DQ5VT03 806 aaPredicted RBP17.78■□□□□ 0.44
NR4A1-221ENST00000565848 C14orf93Q9H972 538 aaKnown RBP17.78■□□□□ 0.44
NR4A1-221ENST00000565848 FAM135BQ49AJ0 1406 aa17.78■□□□□ 0.44
NR4A1-221ENST00000565848 BCANQ96GW7 911 aa17.77■□□□□ 0.44
NR4A1-221ENST00000565848 SLC26A8Q96RN1 970 aa17.76■□□□□ 0.43
NR4A1-221ENST00000565848 TMEM94Q12767 1356 aa17.76■□□□□ 0.43
NR4A1-221ENST00000565848 KCNA6P17658 529 aa17.73■□□□□ 0.43
NR4A1-221ENST00000565848 CFAP70Q5T0N1 1121 aa17.73■□□□□ 0.43
NR4A1-221ENST00000565848 MEX3CQ5U5Q3 659 aaKnown RBP17.72■□□□□ 0.43
NR4A1-221ENST00000565848 KNDC1Q76NI1 1749 aa17.72■□□□□ 0.43
NR4A1-221ENST00000565848 NBPF1Q3BBV0 1214 aa17.71■□□□□ 0.43
NR4A1-221ENST00000565848 TBX22Q9Y458 520 aa17.71■□□□□ 0.43
NR4A1-221ENST00000565848 CHD2O14647 1828 aaKnown RBP17.7■□□□□ 0.42
NR4A1-221ENST00000565848 XRN1Q8IZH2 1706 aaKnown RBP17.7■□□□□ 0.42
NR4A1-221ENST00000565848 METP08581 1390 aa17.7■□□□□ 0.42
NR4A1-221ENST00000565848 PIK3R4Q99570 1358 aa17.7■□□□□ 0.42
NR4A1-221ENST00000565848 UPF1Q92900 1129 aaKnown RBP eCLIP17.7■□□□□ 0.42
NR4A1-221ENST00000565848 SLAIN2Q9P270 581 aa17.7■□□□□ 0.42
NR4A1-221ENST00000565848 TECPR2O15040 1411 aa17.69■□□□□ 0.42
NR4A1-221ENST00000565848 NWD1Q149M9 1564 aa17.69■□□□□ 0.42
NR4A1-221ENST00000565848 ROCK2O75116 1388 aaKnown RBP17.68■□□□□ 0.42
NR4A1-221ENST00000565848 ARHGEF28Q8N1W1 1705 aaKnown RBP17.68■□□□□ 0.42
NR4A1-221ENST00000565848 PTPRUQ92729 1446 aa17.68■□□□□ 0.42
NR4A1-221ENST00000565848 DLC1Q96QB1 1528 aa17.67■□□□□ 0.42
NR4A1-221ENST00000565848 YTHDC2Q9H6S0 1430 aaKnown RBP17.66■□□□□ 0.42
NR4A1-221ENST00000565848 LRPPRCP42704 1394 aaKnown RBP17.66■□□□□ 0.42
NR4A1-221ENST00000565848 ABCC11Q96J66 1382 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms