RNA–Protein interactions for RNA: ENST00000565810.1

CDH1-208, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 282 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-208ENST00000565810 ADGRB3O60242 1522 aa11.13□□□□□ -0.63
CDH1-208ENST00000565810 SETD1BQ9UPS6 1966 aaKnown RBP11.12□□□□□ -0.63
CDH1-208ENST00000565810 NEURL4Q96JN8 1562 aa11.12□□□□□ -0.63
CDH1-208ENST00000565810 RIMS2Q9UQ26 1411 aa11.12□□□□□ -0.63
CDH1-208ENST00000565810 CEP170BQ9Y4F5 1589 aaPredicted RBP11.11□□□□□ -0.63
CDH1-208ENST00000565810 LTKP29376 864 aa11.1□□□□□ -0.63
CDH1-208ENST00000565810 ADGRF5Q8IZF2 1346 aa11.09□□□□□ -0.63
CDH1-208ENST00000565810 TMEM131LA2VDJ0 1609 aa11.09□□□□□ -0.63
CDH1-208ENST00000565810 MYO3AQ8NEV4 1616 aa11.09□□□□□ -0.63
CDH1-208ENST00000565810 HSPA2P54652 639 aa11.09□□□□□ -0.63
CDH1-208ENST00000565810 ZFYVE9O95405 1425 aa11.09□□□□□ -0.63
CDH1-208ENST00000565810 KIF1BO60333 1816 aa11.08□□□□□ -0.64
CDH1-208ENST00000565810 ARHGAP23Q9P227 1491 aa11.07□□□□□ -0.64
CDH1-208ENST00000565810 SLIT1O75093 1534 aa11.07□□□□□ -0.64
CDH1-208ENST00000565810 NCKAP5LQ9HCH0 1330 aa11.07□□□□□ -0.64
CDH1-208ENST00000565810 MYOM2P54296 1465 aa11.06□□□□□ -0.64
CDH1-208ENST00000565810 SCAF11Q99590 1463 aaKnown RBP11.06□□□□□ -0.64
CDH1-208ENST00000565810 KDM5AP29375 1690 aaKnown RBP11.06□□□□□ -0.64
CDH1-208ENST00000565810 NBPF8Q3BBV2 869 aa11.06□□□□□ -0.64
CDH1-208ENST00000565810 C14orf93Q9H972 538 aaKnown RBP11.06□□□□□ -0.64
CDH1-208ENST00000565810 LMTK3Q96Q04 1460 aa11.06□□□□□ -0.64
CDH1-208ENST00000565810 PLEKHG1Q9ULL1 1385 aa11.05□□□□□ -0.64
CDH1-208ENST00000565810 NEXMIFQ5QGS0 1516 aa11.05□□□□□ -0.64
CDH1-208ENST00000565810 CFAP70Q5T0N1 1121 aa11.05□□□□□ -0.64
CDH1-208ENST00000565810 PRAG1Q86YV5 1406 aa11.05□□□□□ -0.64
CDH1-208ENST00000565810 UBR1Q8IWV7 1749 aa11.05□□□□□ -0.64
CDH1-208ENST00000565810 TBX22Q9Y458 520 aa11.04□□□□□ -0.64
CDH1-208ENST00000565810 DMRT2Q9Y5R5 561 aa11.04□□□□□ -0.64
CDH1-208ENST00000565810 ZNF142P52746 1687 aaPredicted RBP11.04□□□□□ -0.64
CDH1-208ENST00000565810 PIK3C2GO75747 1445 aa11.03□□□□□ -0.64
CDH1-208ENST00000565810 SLC26A8Q96RN1 970 aa11.03□□□□□ -0.64
CDH1-208ENST00000565810 CARD11Q9BXL7 1154 aa11.03□□□□□ -0.64
CDH1-208ENST00000565810 ROCK2O75116 1388 aaKnown RBP11.03□□□□□ -0.64
CDH1-208ENST00000565810 NRXN1Q9ULB1 1477 aa11.02□□□□□ -0.65
CDH1-208ENST00000565810 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
CDH1-208ENST00000565810 NBPF1Q3BBV0 1214 aa11.01□□□□□ -0.65
CDH1-208ENST00000565810 TMEM132EQ6IEE7 984 aa11.01□□□□□ -0.65
CDH1-208ENST00000565810 MED14O60244 1454 aa11□□□□□ -0.65
CDH1-208ENST00000565810 PHF23Q9BUL5 403 aaPredicted RBP10.99□□□□□ -0.65
CDH1-208ENST00000565810 STK26Q9P289 416 aa10.99□□□□□ -0.65
CDH1-208ENST00000565810 EIF4G2P78344 907 aaKnown RBP eCLIP10.98□□□□□ -0.65
CDH1-208ENST00000565810 ADAMTS13Q76LX8 1427 aa10.98□□□□□ -0.65
CDH1-208ENST00000565810 RALGAPBQ86X10 1494 aa10.98□□□□□ -0.65
CDH1-208ENST00000565810 PPLO60437 1756 aa10.98□□□□□ -0.65
CDH1-208ENST00000565810 POTEDQ86YR6 584 aa10.97□□□□□ -0.65
CDH1-208ENST00000565810 TRAK1Q9UPV9 953 aa10.97□□□□□ -0.65
CDH1-208ENST00000565810 AMOTL2Q9Y2J4 779 aa10.97□□□□□ -0.65
CDH1-208ENST00000565810 GPRASP1Q5JY77 1395 aa10.97□□□□□ -0.65
CDH1-208ENST00000565810 PIK3R4Q99570 1358 aa10.97□□□□□ -0.65
CDH1-208ENST00000565810 SETBP1Q9Y6X0 1596 aa10.97□□□□□ -0.65
CDH1-208ENST00000565810 MYO5BQ9ULV0 1848 aa10.97□□□□□ -0.65
CDH1-208ENST00000565810 METP08581 1390 aa10.96□□□□□ -0.65
CDH1-208ENST00000565810 ALKQ9UM73 1620 aa10.95□□□□□ -0.66
CDH1-208ENST00000565810 LRPPRCP42704 1394 aaKnown RBP10.95□□□□□ -0.66
CDH1-208ENST00000565810 EIF3AQ14152 1382 aaKnown RBP10.95□□□□□ -0.66
CDH1-208ENST00000565810 KCNA6P17658 529 aa10.95□□□□□ -0.66
CDH1-208ENST00000565810 POGKQ9P215 609 aa10.95□□□□□ -0.66
CDH1-208ENST00000565810 IFT172Q9UG01 1749 aa10.95□□□□□ -0.66
CDH1-208ENST00000565810 YTHDC2Q9H6S0 1430 aaKnown RBP10.94□□□□□ -0.66
CDH1-208ENST00000565810 ABCC11Q96J66 1382 aa10.94□□□□□ -0.66
CDH1-208ENST00000565810 SLC24A1O60721 1099 aa10.94□□□□□ -0.66
CDH1-208ENST00000565810 SIRT1Q96EB6 747 aa10.94□□□□□ -0.66
CDH1-208ENST00000565810 DIP2AQ14689 1571 aa10.94□□□□□ -0.66
CDH1-208ENST00000565810 USP47Q96K76 1375 aa10.93□□□□□ -0.66
CDH1-208ENST00000565810 ST20-MTHFSA0A0A6YYL1 179 aa10.92□□□□□ -0.66
CDH1-208ENST00000565810 HSPA5P11021 654 aaKnown RBP10.92□□□□□ -0.66
CDH1-208ENST00000565810 PRAM1Q96QH2 718 aa10.92□□□□□ -0.66
CDH1-208ENST00000565810 LAMC1P11047 1609 aa10.91□□□□□ -0.66
CDH1-208ENST00000565810 CENPJQ9HC77 1338 aaPredicted RBP10.91□□□□□ -0.66
CDH1-208ENST00000565810 PROSER2Q86WR7 435 aaPredicted RBP10.91□□□□□ -0.66
CDH1-208ENST00000565810 IQGAP1P46940 1657 aa10.91□□□□□ -0.66
CDH1-208ENST00000565810 TRPM1Q7Z4N2 1603 aa10.91□□□□□ -0.66
CDH1-208ENST00000565810 ADGRB1O14514 1584 aa10.9□□□□□ -0.66
CDH1-208ENST00000565810 KIAA1210Q9ULL0 1709 aa10.9□□□□□ -0.66
CDH1-208ENST00000565810 SAFB2Q14151 953 aaKnown RBP eCLIP10.9□□□□□ -0.66
CDH1-208ENST00000565810 WAPLQ7Z5K2 1190 aa10.9□□□□□ -0.66
CDH1-208ENST00000565810 NRXN3Q9Y4C0 1643 aa10.9□□□□□ -0.66
CDH1-208ENST00000565810 PTPRUQ92729 1446 aa10.9□□□□□ -0.66
CDH1-208ENST00000565810 C14orf37Q86TY3 774 aa10.89□□□□□ -0.67
CDH1-208ENST00000565810 HIRIP3Q9BW71 556 aaPredicted RBP10.89□□□□□ -0.67
CDH1-208ENST00000565810 TECPR2O15040 1411 aa10.89□□□□□ -0.67
CDH1-208ENST00000565810 POLR1AO95602 1720 aaPredicted RBP10.89□□□□□ -0.67
CDH1-208ENST00000565810 TMF1P82094 1093 aa10.88□□□□□ -0.67
CDH1-208ENST00000565810 FAM135BQ49AJ0 1406 aa10.88□□□□□ -0.67
CDH1-208ENST00000565810 ASXL1Q8IXJ9 1541 aa10.88□□□□□ -0.67
CDH1-208ENST00000565810 ROBO2Q9HCK4 1378 aa10.88□□□□□ -0.67
CDH1-208ENST00000565810 ZNF335Q9H4Z2 1342 aaPredicted RBP10.87□□□□□ -0.67
CDH1-208ENST00000565810 PTCH1Q13635 1447 aa10.87□□□□□ -0.67
CDH1-208ENST00000565810 CDCA8Q53HL2 280 aa10.87□□□□□ -0.67
CDH1-208ENST00000565810 STRCQ7RTU9 1775 aa10.87□□□□□ -0.67
CDH1-208ENST00000565810 DLC1Q96QB1 1528 aa10.86□□□□□ -0.67
CDH1-208ENST00000565810 EVC2Q86UK5 1308 aa10.85□□□□□ -0.67
CDH1-208ENST00000565810 MINK1Q8N4C8 1332 aaPredicted RBP10.85□□□□□ -0.67
CDH1-208ENST00000565810 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
CDH1-208ENST00000565810 TESK2Q96S53 571 aa10.85□□□□□ -0.67
CDH1-208ENST00000565810 PLEKHH1Q9ULM0 1364 aa10.85□□□□□ -0.67
CDH1-208ENST00000565810 RBM33Q96EV2 1170 aaKnown RBP10.84□□□□□ -0.67
CDH1-208ENST00000565810 POLR3GLQ9BT43 218 aa10.84□□□□□ -0.67
CDH1-208ENST00000565810 SBNO2Q9Y2G9 1366 aa10.84□□□□□ -0.67
CDH1-208ENST00000565810 NKTRP30414 1462 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms