RNA–Protein interactions for RNA: ENST00000565738.1

KARS-205, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 2

Gene KARS, Length 607 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-205ENST00000565738 RABGEF1Q9UJ41 708 aa12.72□□□□□ -0.37
KARS-205ENST00000565738 SKIV2LQ15477 1246 aaKnown RBP12.71□□□□□ -0.37
KARS-205ENST00000565738 RDH13Q8NBN7 331 aa12.71□□□□□ -0.37
KARS-205ENST00000565738 CD46P15529 392 aa12.7□□□□□ -0.38
KARS-205ENST00000565738 MYSM1Q5VVJ2 828 aa12.7□□□□□ -0.38
KARS-205ENST00000565738 HS3ST6Q96QI5 342 aa12.7□□□□□ -0.38
KARS-205ENST00000565738 PROCA1Q8NCQ7 364 aaPredicted RBP12.69□□□□□ -0.38
KARS-205ENST00000565738 SLC4A5Q9BY07 1137 aa12.69□□□□□ -0.38
KARS-205ENST00000565738 VPS9D1Q9Y2B5 631 aa12.68□□□□□ -0.38
KARS-205ENST00000565738 SWT1Q5T5J6 900 aaKnown RBP12.67□□□□□ -0.38
KARS-205ENST00000565738 NUTM1Q86Y26 1132 aa12.67□□□□□ -0.38
KARS-205ENST00000565738 POTEB3A0JP26 581 aa12.66□□□□□ -0.38
KARS-205ENST00000565738 CLK2P49760 499 aaKnown RBP12.66□□□□□ -0.38
KARS-205ENST00000565738 POTEBQ6S5H4 581 aa12.66□□□□□ -0.38
KARS-205ENST00000565738 SPIRE2Q8WWL2 714 aa12.66□□□□□ -0.38
KARS-205ENST00000565738 DIXDC1Q155Q3 683 aa12.65□□□□□ -0.38
KARS-205ENST00000565738 FAM98CQ17RN3 349 aaKnown RBP12.64□□□□□ -0.39
KARS-205ENST00000565738 HDGFP51858 240 aaKnown RBP12.63□□□□□ -0.39
KARS-205ENST00000565738 RSPH4AQ5TD94 716 aa12.62□□□□□ -0.39
KARS-205ENST00000565738 NBPF3Q9H094 633 aa12.62□□□□□ -0.39
KARS-205ENST00000565738 RNF40O75150 1001 aa12.61□□□□□ -0.39
KARS-205ENST00000565738 RIC3Q7Z5B4 369 aa12.61□□□□□ -0.39
KARS-205ENST00000565738 LIMD1Q9UGP4 676 aa12.61□□□□□ -0.39
KARS-205ENST00000565738 SLC4A3P48751 1232 aa12.6□□□□□ -0.39
KARS-205ENST00000565738 CSPP1Q1MSJ5 1256 aa12.6□□□□□ -0.39
KARS-205ENST00000565738 SAMD7Q7Z3H4 446 aa12.6□□□□□ -0.39
KARS-205ENST00000565738 LCE2DQ5TA82 110 aaPredicted RBP12.59□□□□□ -0.39
KARS-205ENST00000565738 MOXD2PA6NHM9 499 aa12.58□□□□□ -0.4
KARS-205ENST00000565738 LSM11P83369 360 aaKnown RBP eCLIP12.58□□□□□ -0.4
KARS-205ENST00000565738 FLIIQ13045 1269 aa12.58□□□□□ -0.4
KARS-205ENST00000565738 TK2O00142 265 aa12.57□□□□□ -0.4
KARS-205ENST00000565738 KDM4AO75164 1064 aa12.57□□□□□ -0.4
KARS-205ENST00000565738 SLC10A3P09131 477 aa12.57□□□□□ -0.4
KARS-205ENST00000565738 NDUFV2P19404 249 aa12.57□□□□□ -0.4
KARS-205ENST00000565738 LAPTM4BQ86VI4 370 aa12.57□□□□□ -0.4
KARS-205ENST00000565738 MRPL50Q8N5N7 158 aaKnown RBP12.57□□□□□ -0.4
KARS-205ENST00000565738 GNL3Q9BVP2 549 aaKnown RBP eCLIP12.57□□□□□ -0.4
KARS-205ENST00000565738 SUPT5HO00267 1087 aaKnown RBP12.56□□□□□ -0.4
KARS-205ENST00000565738 GCGRP47871 477 aa12.56□□□□□ -0.4
KARS-205ENST00000565738 RSBN1LQ6PCB5 846 aaPredicted RBP12.56□□□□□ -0.4
KARS-205ENST00000565738 SLF2Q8IX21 1173 aa12.56□□□□□ -0.4
KARS-205ENST00000565738 BHMG1C9JSJ3 638 aaPredicted RBP12.55□□□□□ -0.4
KARS-205ENST00000565738 ADGRD1Q6QNK2 874 aa12.55□□□□□ -0.4
KARS-205ENST00000565738 SPTLC1O15269 473 aa12.54□□□□□ -0.4
KARS-205ENST00000565738 ZFRQ96KR1 1074 aaKnown RBP12.54□□□□□ -0.4
KARS-205ENST00000565738 ZMYND15Q9H091 742 aa12.54□□□□□ -0.4
KARS-205ENST00000565738 ANKRD13DQ6ZTN6 518 aa12.53□□□□□ -0.4
KARS-205ENST00000565738 STAC3Q96MF2 364 aa12.52□□□□□ -0.41
KARS-205ENST00000565738 CFHP08603 1231 aa12.51□□□□□ -0.41
KARS-205ENST00000565738 RFC5P40937 340 aa12.51□□□□□ -0.41
KARS-205ENST00000565738 USP46P62068 366 aa12.51□□□□□ -0.41
KARS-205ENST00000565738 FBXO31Q5XUX0 539 aaPredicted RBP12.51□□□□□ -0.41
KARS-205ENST00000565738 HOXA2O43364 376 aa12.5□□□□□ -0.41
KARS-205ENST00000565738 PCDHB15Q9Y5E8 787 aa12.5□□□□□ -0.41
KARS-205ENST00000565738 GOLGA8CPA6NN73 597 aa12.49□□□□□ -0.41
KARS-205ENST00000565738 GUCA2AQ02747 115 aa12.49□□□□□ -0.41
KARS-205ENST00000565738 MCM6Q14566 821 aa12.49□□□□□ -0.41
KARS-205ENST00000565738 QPCTQ16769 361 aa12.49□□□□□ -0.41
KARS-205ENST00000565738 HLA-CQ95604 372 aa12.49□□□□□ -0.41
KARS-205ENST00000565738 LRCH3Q96II8 777 aa12.49□□□□□ -0.41
KARS-205ENST00000565738 NUTM2BA6NNL0 878 aaPredicted RBP12.48□□□□□ -0.41
KARS-205ENST00000565738 NUTM2EB1AL46 878 aaPredicted RBP12.48□□□□□ -0.41
KARS-205ENST00000565738 FDX1P10109 184 aa12.48□□□□□ -0.41
KARS-205ENST00000565738 NUTM2DQ5VT03 806 aaPredicted RBP12.48□□□□□ -0.41
KARS-205ENST00000565738 NUTM2AQ8IVF1 878 aaPredicted RBP12.48□□□□□ -0.41
KARS-205ENST00000565738 UBTFP17480 764 aaKnown RBP12.47□□□□□ -0.41
KARS-205ENST00000565738 TUSC1Q2TAM9 212 aa12.47□□□□□ -0.41
KARS-205ENST00000565738 CABLES1Q8TDN4 633 aa12.47□□□□□ -0.41
KARS-205ENST00000565738 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.47□□□□□ -0.41
KARS-205ENST00000565738 HRO43593 1189 aa12.46□□□□□ -0.41
KARS-205ENST00000565738 GJA5P36382 358 aa12.46□□□□□ -0.41
KARS-205ENST00000565738 FUT2Q10981 343 aa12.46□□□□□ -0.41
KARS-205ENST00000565738 PPP2R2DQ66LE6 453 aa12.45□□□□□ -0.42
KARS-205ENST00000565738 KMT5BQ4FZB7 885 aa12.44□□□□□ -0.42
KARS-205ENST00000565738 RTL5Q5HYW3 569 aaPredicted RBP12.44□□□□□ -0.42
KARS-205ENST00000565738 ANKK1Q8NFD2 765 aa12.44□□□□□ -0.42
KARS-205ENST00000565738 LILRB3O75022 631 aa12.43□□□□□ -0.42
KARS-205ENST00000565738 GRIPAP1Q4V328 841 aa12.43□□□□□ -0.42
KARS-205ENST00000565738 CLUAP1Q96AJ1 413 aa12.43□□□□□ -0.42
KARS-205ENST00000565738 ZBTB3Q9H5J0 574 aa12.43□□□□□ -0.42
KARS-205ENST00000565738 PCDHGC3Q9UN70 934 aa12.43□□□□□ -0.42
KARS-205ENST00000565738 TMEM259Q4ZIN3 620 aa12.42□□□□□ -0.42
KARS-205ENST00000565738 AP1G2O75843 785 aa12.41□□□□□ -0.42
KARS-205ENST00000565738 HRCP23327 699 aa12.41□□□□□ -0.42
KARS-205ENST00000565738 SNRKQ9NRH2 765 aa12.41□□□□□ -0.42
KARS-205ENST00000565738 BCAMP50895 628 aa12.4□□□□□ -0.42
KARS-205ENST00000565738 PRPF38BQ5VTL8 546 aaKnown RBP12.4□□□□□ -0.42
KARS-205ENST00000565738 NECTIN2Q92692 538 aa12.4□□□□□ -0.42
KARS-205ENST00000565738 SPDYE5A6NIY4 337 aa12.39□□□□□ -0.43
KARS-205ENST00000565738 ATP6V1AP38606 617 aa12.39□□□□□ -0.43
KARS-205ENST00000565738 BANK1Q8NDB2 785 aa12.39□□□□□ -0.43
KARS-205ENST00000565738 WNT2BQ93097 391 aa12.39□□□□□ -0.43
KARS-205ENST00000565738 HPS5Q9UPZ3 1129 aa12.39□□□□□ -0.43
KARS-205ENST00000565738 C6orf229H3BNL8 230 aa12.38□□□□□ -0.43
KARS-205ENST00000565738 PUS10Q3MIT2 529 aaKnown RBP12.38□□□□□ -0.43
KARS-205ENST00000565738 TSC1Q92574 1164 aa12.38□□□□□ -0.43
KARS-205ENST00000565738 SOWAHBA6NEL2 793 aa12.37□□□□□ -0.43
KARS-205ENST00000565738 PPP4CP60510 307 aa12.37□□□□□ -0.43
KARS-205ENST00000565738 MTMR2Q13614 643 aa12.37□□□□□ -0.43
KARS-205ENST00000565738 POM121Q96HA1 1249 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms