RNA–Protein interactions for RNA: ENST00000565646.5

CFDP1-205, Transcript of craniofacial development protein 1, humanhuman

TSL 3

Gene CFDP1, Length 608 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFDP1-205ENST00000565646 CLSPNQ9HAW4 1339 aa18.62■□□□□ 0.57
CFDP1-205ENST00000565646 ADGRB3O60242 1522 aa18.62■□□□□ 0.57
CFDP1-205ENST00000565646 SPATA31E1Q6ZUB1 1445 aa18.61■□□□□ 0.57
CFDP1-205ENST00000565646 TOM1O60784 492 aa18.61■□□□□ 0.57
CFDP1-205ENST00000565646 NEURL4Q96JN8 1562 aa18.6■□□□□ 0.57
CFDP1-205ENST00000565646 ANKLE2Q86XL3 938 aa18.6■□□□□ 0.57
CFDP1-205ENST00000565646 HSPA1LP34931 641 aa18.59■□□□□ 0.57
CFDP1-205ENST00000565646 CPS1P31327 1500 aa18.59■□□□□ 0.57
CFDP1-205ENST00000565646 THEMISQ8N1K5 641 aaPredicted RBP18.58■□□□□ 0.56
CFDP1-205ENST00000565646 CHGAP10645 457 aaKnown RBP18.55■□□□□ 0.56
CFDP1-205ENST00000565646 NEUROD1Q13562 356 aa18.55■□□□□ 0.56
CFDP1-205ENST00000565646 IFT172Q9UG01 1749 aa18.54■□□□□ 0.56
CFDP1-205ENST00000565646 PPLO60437 1756 aa18.53■□□□□ 0.56
CFDP1-205ENST00000565646 ARHGAP23Q9P227 1491 aa18.52■□□□□ 0.56
CFDP1-205ENST00000565646 MED1Q15648 1581 aaPredicted RBP18.52■□□□□ 0.56
CFDP1-205ENST00000565646 RGL3Q3MIN7 710 aa18.52■□□□□ 0.56
CFDP1-205ENST00000565646 STAG3Q9UJ98 1225 aa18.52■□□□□ 0.56
CFDP1-205ENST00000565646 SLIT1O75093 1534 aa18.52■□□□□ 0.56
CFDP1-205ENST00000565646 NEXMIFQ5QGS0 1516 aa18.52■□□□□ 0.56
CFDP1-205ENST00000565646 NPHP4O75161 1426 aaPredicted RBP18.51■□□□□ 0.55
CFDP1-205ENST00000565646 ZFYVE9O95405 1425 aa18.51■□□□□ 0.55
CFDP1-205ENST00000565646 TMEM2Q9UHN6 1383 aa18.5■□□□□ 0.55
CFDP1-205ENST00000565646 IQGAP1P46940 1657 aa18.5■□□□□ 0.55
CFDP1-205ENST00000565646 MED14O60244 1454 aa18.49■□□□□ 0.55
CFDP1-205ENST00000565646 RIMS2Q9UQ26 1411 aa18.48■□□□□ 0.55
CFDP1-205ENST00000565646 STRCP1A6NGW2 1772 aa18.47■□□□□ 0.55
CFDP1-205ENST00000565646 ZNF326Q5BKZ1 582 aaKnown RBP18.47■□□□□ 0.55
CFDP1-205ENST00000565646 L3MBTL2Q969R5 705 aa18.46■□□□□ 0.55
CFDP1-205ENST00000565646 RPGRIP1LQ68CZ1 1315 aa18.46■□□□□ 0.55
CFDP1-205ENST00000565646 LTKP29376 864 aa18.45■□□□□ 0.54
CFDP1-205ENST00000565646 SENP3Q9H4L4 574 aaPredicted RBP18.45■□□□□ 0.54
CFDP1-205ENST00000565646 PHF23Q9BUL5 403 aaPredicted RBP18.44■□□□□ 0.54
CFDP1-205ENST00000565646 ALKQ9UM73 1620 aa18.44■□□□□ 0.54
CFDP1-205ENST00000565646 TONSLQ96HA7 1378 aa18.43■□□□□ 0.54
CFDP1-205ENST00000565646 MYOM2P54296 1465 aa18.43■□□□□ 0.54
CFDP1-205ENST00000565646 SCAF11Q99590 1463 aaKnown RBP18.43■□□□□ 0.54
CFDP1-205ENST00000565646 NUTM2DQ5VT03 806 aaPredicted RBP18.42■□□□□ 0.54
CFDP1-205ENST00000565646 DCAF11Q8TEB1 546 aa18.42■□□□□ 0.54
CFDP1-205ENST00000565646 TXNDC2Q86VQ3 553 aa18.41■□□□□ 0.54
CFDP1-205ENST00000565646 ADGRF5Q8IZF2 1346 aa18.41■□□□□ 0.54
CFDP1-205ENST00000565646 NRXN1Q9ULB1 1477 aa18.4■□□□□ 0.54
CFDP1-205ENST00000565646 LRRC7Q96NW7 1537 aa18.4■□□□□ 0.54
CFDP1-205ENST00000565646 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.4■□□□□ 0.54
CFDP1-205ENST00000565646 NRXN3Q9Y4C0 1643 aa18.39■□□□□ 0.53
CFDP1-205ENST00000565646 TIMELESSQ9UNS1 1208 aa18.39■□□□□ 0.53
CFDP1-205ENST00000565646 KDM2AQ9Y2K7 1162 aa18.39■□□□□ 0.53
CFDP1-205ENST00000565646 VGFO15240 615 aaPredicted RBP18.38■□□□□ 0.53
CFDP1-205ENST00000565646 EID1Q9Y6B2 187 aa18.38■□□□□ 0.53
CFDP1-205ENST00000565646 HDGFP51858 240 aaKnown RBP18.37■□□□□ 0.53
CFDP1-205ENST00000565646 STAC3Q96MF2 364 aa18.37■□□□□ 0.53
CFDP1-205ENST00000565646 PLEKHG1Q9ULL1 1385 aa18.37■□□□□ 0.53
CFDP1-205ENST00000565646 PIK3C2GO75747 1445 aa18.37■□□□□ 0.53
CFDP1-205ENST00000565646 SETBP1Q9Y6X0 1596 aa18.37■□□□□ 0.53
CFDP1-205ENST00000565646 SETD1AO15047 1707 aaKnown RBP18.36■□□□□ 0.53
CFDP1-205ENST00000565646 PRAG1Q86YV5 1406 aa18.36■□□□□ 0.53
CFDP1-205ENST00000565646 PPP1R15AO75807 674 aaPredicted RBP18.35■□□□□ 0.53
CFDP1-205ENST00000565646 NBPF8Q3BBV2 869 aa18.34■□□□□ 0.53
CFDP1-205ENST00000565646 XIRP1Q702N8 1843 aaKnown RBP18.34■□□□□ 0.53
CFDP1-205ENST00000565646 ADAMTS13Q76LX8 1427 aa18.33■□□□□ 0.53
CFDP1-205ENST00000565646 KIAA1210Q9ULL0 1709 aa18.32■□□□□ 0.52
CFDP1-205ENST00000565646 TRPM1Q7Z4N2 1603 aa18.31■□□□□ 0.52
CFDP1-205ENST00000565646 LAMC1P11047 1609 aa18.3■□□□□ 0.52
CFDP1-205ENST00000565646 DIP2AQ14689 1571 aa18.29■□□□□ 0.52
CFDP1-205ENST00000565646 ASXL1Q8IXJ9 1541 aa18.28■□□□□ 0.52
CFDP1-205ENST00000565646 SLC26A8Q96RN1 970 aa18.28■□□□□ 0.52
CFDP1-205ENST00000565646 C14orf93Q9H972 538 aaKnown RBP18.28■□□□□ 0.52
CFDP1-205ENST00000565646 CFAP70Q5T0N1 1121 aa18.27■□□□□ 0.52
CFDP1-205ENST00000565646 TBX22Q9Y458 520 aa18.26■□□□□ 0.51
CFDP1-205ENST00000565646 ADGRB1O14514 1584 aa18.25■□□□□ 0.51
CFDP1-205ENST00000565646 NBPF1Q3BBV0 1214 aa18.25■□□□□ 0.51
CFDP1-205ENST00000565646 BCANQ96GW7 911 aa18.25■□□□□ 0.51
CFDP1-205ENST00000565646 METP08581 1390 aa18.25■□□□□ 0.51
CFDP1-205ENST00000565646 RALGAPBQ86X10 1494 aa18.25■□□□□ 0.51
CFDP1-205ENST00000565646 CHD2O14647 1828 aaKnown RBP18.24■□□□□ 0.51
CFDP1-205ENST00000565646 RGS17Q9UGC6 210 aaPredicted RBP18.23■□□□□ 0.51
CFDP1-205ENST00000565646 PTPRUQ92729 1446 aa18.22■□□□□ 0.51
CFDP1-205ENST00000565646 TMEM132EQ6IEE7 984 aa18.21■□□□□ 0.51
CFDP1-205ENST00000565646 GPRASP1Q5JY77 1395 aa18.2■□□□□ 0.5
CFDP1-205ENST00000565646 FAM135BQ49AJ0 1406 aa18.2■□□□□ 0.5
CFDP1-205ENST00000565646 XRN1Q8IZH2 1706 aaKnown RBP18.2■□□□□ 0.5
CFDP1-205ENST00000565646 PIK3R4Q99570 1358 aa18.19■□□□□ 0.5
CFDP1-205ENST00000565646 KCNA6P17658 529 aa18.19■□□□□ 0.5
CFDP1-205ENST00000565646 ZEB1P37275 1124 aaPredicted RBP18.19■□□□□ 0.5
CFDP1-205ENST00000565646 PROSER2Q86WR7 435 aaPredicted RBP18.19■□□□□ 0.5
CFDP1-205ENST00000565646 TMEM94Q12767 1356 aa18.18■□□□□ 0.5
CFDP1-205ENST00000565646 NWD1Q149M9 1564 aa18.18■□□□□ 0.5
CFDP1-205ENST00000565646 RBM33Q96EV2 1170 aaKnown RBP18.18■□□□□ 0.5
CFDP1-205ENST00000565646 KNDC1Q76NI1 1749 aa18.18■□□□□ 0.5
CFDP1-205ENST00000565646 ROCK2O75116 1388 aaKnown RBP18.17■□□□□ 0.5
CFDP1-205ENST00000565646 YTHDC2Q9H6S0 1430 aaKnown RBP18.17■□□□□ 0.5
CFDP1-205ENST00000565646 ROBO1Q9Y6N7 1651 aa18.17■□□□□ 0.5
CFDP1-205ENST00000565646 LRPPRCP42704 1394 aaKnown RBP18.16■□□□□ 0.5
CFDP1-205ENST00000565646 ARHGEF28Q8N1W1 1705 aaKnown RBP18.15■□□□□ 0.5
CFDP1-205ENST00000565646 ABCC11Q96J66 1382 aa18.14■□□□□ 0.49
CFDP1-205ENST00000565646 TECPR2O15040 1411 aa18.14■□□□□ 0.49
CFDP1-205ENST00000565646 POTEAQ6S8J7 498 aa18.13■□□□□ 0.49
CFDP1-205ENST00000565646 AMOTL2Q9Y2J4 779 aa18.13■□□□□ 0.49
CFDP1-205ENST00000565646 CARD11Q9BXL7 1154 aa18.12■□□□□ 0.49
CFDP1-205ENST00000565646 STK26Q9P289 416 aa18.12■□□□□ 0.49
CFDP1-205ENST00000565646 DLC1Q96QB1 1528 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms