RNA–Protein interactions for RNA: ENST00000565636.5

CDH13-207, Transcript of cadherin 13, humanhuman

TSL 5 BASIC

Gene CDH13, Length 810 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-207ENST00000565636 VARS2Q5ST30 1063 aaKnown RBP13.68□□□□□ -0.22
CDH13-207ENST00000565636 GPR153Q6NV75 609 aa13.68□□□□□ -0.22
CDH13-207ENST00000565636 UBTFP17480 764 aaKnown RBP13.67□□□□□ -0.22
CDH13-207ENST00000565636 MMRN1Q13201 1228 aa13.67□□□□□ -0.22
CDH13-207ENST00000565636 RYDENQ9NUL5 291 aaKnown RBP13.67□□□□□ -0.22
CDH13-207ENST00000565636 ZNF518AQ6AHZ1 1483 aa13.67□□□□□ -0.22
CDH13-207ENST00000565636 REREQ9P2R6 1566 aa13.66□□□□□ -0.22
CDH13-207ENST00000565636 CLIP1P30622 1438 aa13.65□□□□□ -0.22
CDH13-207ENST00000565636 TROQ12816 1431 aaPredicted RBP13.65□□□□□ -0.22
CDH13-207ENST00000565636 C9orf84Q5VXU9 1444 aa13.65□□□□□ -0.22
CDH13-207ENST00000565636 ARHGEF12Q9NZN5 1544 aa13.65□□□□□ -0.22
CDH13-207ENST00000565636 KIF3CO14782 793 aa13.65□□□□□ -0.22
CDH13-207ENST00000565636 RANGAP1P46060 587 aaPredicted RBP13.65□□□□□ -0.22
CDH13-207ENST00000565636 KRTAP3-3Q9BYR6 98 aa13.65□□□□□ -0.22
CDH13-207ENST00000565636 KRTAP3-2Q9BYR7 98 aa13.65□□□□□ -0.22
CDH13-207ENST00000565636 YEATS2Q9ULM3 1422 aa13.64□□□□□ -0.23
CDH13-207ENST00000565636 CDK13Q14004 1512 aaKnown RBP13.64□□□□□ -0.23
CDH13-207ENST00000565636 KIF14Q15058 1648 aa13.64□□□□□ -0.23
CDH13-207ENST00000565636 KDM5CP41229 1560 aa13.64□□□□□ -0.23
CDH13-207ENST00000565636 ARHGAP35Q9NRY4 1499 aa13.64□□□□□ -0.23
CDH13-207ENST00000565636 ARSIQ5FYB1 569 aa13.64□□□□□ -0.23
CDH13-207ENST00000565636 PREX1Q8TCU6 1659 aa13.63□□□□□ -0.23
CDH13-207ENST00000565636 MLH3Q9UHC1 1453 aa13.62□□□□□ -0.23
CDH13-207ENST00000565636 SIGLEC1Q9BZZ2 1709 aa13.61□□□□□ -0.23
CDH13-207ENST00000565636 CDC42BPBQ9Y5S2 1711 aa13.61□□□□□ -0.23
CDH13-207ENST00000565636 CCDC18Q5T9S5 1454 aa13.61□□□□□ -0.23
CDH13-207ENST00000565636 AGLP35573 1532 aa13.59□□□□□ -0.23
CDH13-207ENST00000565636 PPP1R37O75864 691 aa13.59□□□□□ -0.23
CDH13-207ENST00000565636 ZNF687Q8N1G0 1237 aa13.59□□□□□ -0.23
CDH13-207ENST00000565636 CASKIN1Q8WXD9 1431 aa13.58□□□□□ -0.24
CDH13-207ENST00000565636 SLC34A2O95436 690 aa13.58□□□□□ -0.24
CDH13-207ENST00000565636 LRRIQ1Q96JM4 1722 aa13.58□□□□□ -0.24
CDH13-207ENST00000565636 ARHGAP5Q13017 1502 aa13.58□□□□□ -0.24
CDH13-207ENST00000565636 CERKQ8TCT0 537 aa13.57□□□□□ -0.24
CDH13-207ENST00000565636 ATP1B4Q9UN42 357 aaPredicted RBP13.57□□□□□ -0.24
CDH13-207ENST00000565636 ZNF316A6NFI3 1004 aaPredicted RBP13.56□□□□□ -0.24
CDH13-207ENST00000565636 AFAP1Q8N556 730 aa13.56□□□□□ -0.24
CDH13-207ENST00000565636 PREX2Q70Z35 1606 aa13.56□□□□□ -0.24
CDH13-207ENST00000565636 CNTLNQ9NXG0 1405 aa13.55□□□□□ -0.24
CDH13-207ENST00000565636 HSPA2P54652 639 aa13.54□□□□□ -0.24
CDH13-207ENST00000565636 MLECQ14165 292 aa13.54□□□□□ -0.24
CDH13-207ENST00000565636 DIP2CQ9Y2E4 1556 aa13.54□□□□□ -0.24
CDH13-207ENST00000565636 STRCQ7RTU9 1775 aa13.53□□□□□ -0.24
CDH13-207ENST00000565636 UHRF1BP1Q6BDS2 1440 aa13.53□□□□□ -0.24
CDH13-207ENST00000565636 CDC42BPAQ5VT25 1732 aa13.53□□□□□ -0.24
CDH13-207ENST00000565636 ESF1Q9H501 851 aaKnown RBP13.52□□□□□ -0.25
CDH13-207ENST00000565636 PCDHGA4Q9Y5G9 962 aa13.52□□□□□ -0.25
CDH13-207ENST00000565636 PTPRTO14522 1441 aa13.52□□□□□ -0.25
CDH13-207ENST00000565636 ITSN2Q9NZM3 1697 aa13.52□□□□□ -0.25
CDH13-207ENST00000565636 KIDINS220Q9ULH0 1771 aa13.51□□□□□ -0.25
CDH13-207ENST00000565636 C3P01024 1663 aa13.51□□□□□ -0.25
CDH13-207ENST00000565636 ABCC1P33527 1531 aa13.51□□□□□ -0.25
CDH13-207ENST00000565636 TRAPPC8Q9Y2L5 1435 aa13.51□□□□□ -0.25
CDH13-207ENST00000565636 MROH2AA6NES4 1674 aa13.5□□□□□ -0.25
CDH13-207ENST00000565636 FYCO1Q9BQS8 1478 aa13.5□□□□□ -0.25
CDH13-207ENST00000565636 KIAA1107Q9UPP5 1409 aa13.5□□□□□ -0.25
CDH13-207ENST00000565636 NUDT7P0C024 238 aa13.5□□□□□ -0.25
CDH13-207ENST00000565636 KHSRPQ92945 711 aaKnown RBP eCLIP13.5□□□□□ -0.25
CDH13-207ENST00000565636 PLEKHH2Q8IVE3 1493 aa13.49□□□□□ -0.25
CDH13-207ENST00000565636 GPHNQ9NQX3 736 aaPredicted RBP13.49□□□□□ -0.25
CDH13-207ENST00000565636 MYT1LQ9UL68 1186 aa13.49□□□□□ -0.25
CDH13-207ENST00000565636 ABCA6Q8N139 1617 aa13.49□□□□□ -0.25
CDH13-207ENST00000565636 IQSEC2Q5JU85 1478 aa13.48□□□□□ -0.25
CDH13-207ENST00000565636 NPATQ14207 1427 aa13.48□□□□□ -0.25
CDH13-207ENST00000565636 FOXK1P85037 733 aa13.48□□□□□ -0.25
CDH13-207ENST00000565636 PSDA5PKW4 1024 aaPredicted RBP13.46□□□□□ -0.25
CDH13-207ENST00000565636 PTGER2P43116 358 aa13.46□□□□□ -0.25
CDH13-207ENST00000565636 CEBPAP49715 358 aaPredicted RBP13.46□□□□□ -0.25
CDH13-207ENST00000565636 TBC1D12O60347 775 aa13.45□□□□□ -0.26
CDH13-207ENST00000565636 PBX2P40425 430 aa13.44□□□□□ -0.26
CDH13-207ENST00000565636 PLPP6Q8IY26 295 aa13.44□□□□□ -0.26
CDH13-207ENST00000565636 SAMD9LQ8IVG5 1584 aa13.44□□□□□ -0.26
CDH13-207ENST00000565636 GPATCH8Q9UKJ3 1502 aaKnown RBP13.44□□□□□ -0.26
CDH13-207ENST00000565636 NKX1-1Q15270 411 aaPredicted RBP13.43□□□□□ -0.26
CDH13-207ENST00000565636 RSPH4AQ5TD94 716 aa13.43□□□□□ -0.26
CDH13-207ENST00000565636 SPAG9O60271 1321 aaKnown RBP13.42□□□□□ -0.26
CDH13-207ENST00000565636 PTCD2Q8WV60 388 aaKnown RBP13.42□□□□□ -0.26
CDH13-207ENST00000565636 LHX6Q9UPM6 363 aa13.42□□□□□ -0.26
CDH13-207ENST00000565636 ZMYM3Q14202 1370 aa13.41□□□□□ -0.26
CDH13-207ENST00000565636 ADGBQ8N7X0 1667 aa13.4□□□□□ -0.26
CDH13-207ENST00000565636 ANKRD13DQ6ZTN6 518 aa13.4□□□□□ -0.26
CDH13-207ENST00000565636 CFDP1Q9UEE9 299 aaPredicted RBP13.4□□□□□ -0.26
CDH13-207ENST00000565636 RTEL1-TNFRSF6BF6WH68 1400 aa13.39□□□□□ -0.27
CDH13-207ENST00000565636 NCOA1Q15788 1441 aa13.39□□□□□ -0.27
CDH13-207ENST00000565636 RNF166Q96A37 237 aaPredicted RBP13.39□□□□□ -0.27
CDH13-207ENST00000565636 ATP7AQ04656 1500 aa13.39□□□□□ -0.27
CDH13-207ENST00000565636 PLXNC1O60486 1568 aa13.38□□□□□ -0.27
CDH13-207ENST00000565636 CCNB3Q8WWL7 1395 aa13.38□□□□□ -0.27
CDH13-207ENST00000565636 DSG2Q14126 1118 aa13.38□□□□□ -0.27
CDH13-207ENST00000565636 SUPT6HQ7KZ85 1726 aaKnown RBP13.38□□□□□ -0.27
CDH13-207ENST00000565636 FAM135AQ9P2D6 1515 aa13.38□□□□□ -0.27
CDH13-207ENST00000565636 INO80Q9ULG1 1556 aaPredicted RBP13.37□□□□□ -0.27
CDH13-207ENST00000565636 PLA2R1Q13018 1463 aa13.37□□□□□ -0.27
CDH13-207ENST00000565636 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
CDH13-207ENST00000565636 LTBP4Q8N2S1 1624 aa13.37□□□□□ -0.27
CDH13-207ENST00000565636 ZNF142P52746 1687 aaPredicted RBP13.37□□□□□ -0.27
CDH13-207ENST00000565636 A2MP01023 1474 aa13.36□□□□□ -0.27
CDH13-207ENST00000565636 SYCP2Q9BX26 1530 aa13.36□□□□□ -0.27
CDH13-207ENST00000565636 HNRNPMP52272 730 aaKnown RBP eCLIP13.36□□□□□ -0.27
CDH13-207ENST00000565636 ZNF777Q9ULD5 760 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms