RNA–Protein interactions for RNA: ENST00000565548.1

TUBGCP4-210, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 5

Gene TUBGCP4, Length 762 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-210ENST00000565548 TMEM259Q4ZIN3 620 aa11.91□□□□□ -0.5
TUBGCP4-210ENST00000565548 ARSIQ5FYB1 569 aa11.91□□□□□ -0.5
TUBGCP4-210ENST00000565548 RIC3Q7Z5B4 369 aa11.91□□□□□ -0.5
TUBGCP4-210ENST00000565548 RCCD1A6NED2 376 aa11.9□□□□□ -0.5
TUBGCP4-210ENST00000565548 HOXB3P14651 431 aaPredicted RBP11.9□□□□□ -0.5
TUBGCP4-210ENST00000565548 CD46P15529 392 aa11.9□□□□□ -0.5
TUBGCP4-210ENST00000565548 SERPINA10Q9UK55 444 aa11.9□□□□□ -0.5
TUBGCP4-210ENST00000565548 SPTLC1O15269 473 aa11.88□□□□□ -0.51
TUBGCP4-210ENST00000565548 COL9A1P20849 921 aa11.88□□□□□ -0.51
TUBGCP4-210ENST00000565548 DOK7Q18PE1 504 aa11.88□□□□□ -0.51
TUBGCP4-210ENST00000565548 PLSCR2Q9NRY7 297 aa11.88□□□□□ -0.51
TUBGCP4-210ENST00000565548 GPR153Q6NV75 609 aa11.87□□□□□ -0.51
TUBGCP4-210ENST00000565548 CCDC97Q96F63 343 aaPredicted RBP11.86□□□□□ -0.51
TUBGCP4-210ENST00000565548 ZSWIM6Q9HCJ5 1215 aa11.86□□□□□ -0.51
TUBGCP4-210ENST00000565548 RSBN1LQ6PCB5 846 aaPredicted RBP11.85□□□□□ -0.51
TUBGCP4-210ENST00000565548 TSKSQ9UJT2 592 aa11.85□□□□□ -0.51
TUBGCP4-210ENST00000565548 C3orf80F5H4A9 247 aa11.84□□□□□ -0.51
TUBGCP4-210ENST00000565548 MTMR14Q8NCE2 650 aa11.84□□□□□ -0.51
TUBGCP4-210ENST00000565548 ZNF330Q9Y3S2 320 aaPredicted RBP11.84□□□□□ -0.51
TUBGCP4-210ENST00000565548 BCL2L12Q9HB09 334 aa11.83□□□□□ -0.52
TUBGCP4-210ENST00000565548 SOCS7O14512 581 aa11.82□□□□□ -0.52
TUBGCP4-210ENST00000565548 NUDT18Q6ZVK8 323 aa11.82□□□□□ -0.52
TUBGCP4-210ENST00000565548 SULF1Q8IWU6 871 aa11.82□□□□□ -0.52
TUBGCP4-210ENST00000565548 NECTIN2Q92692 538 aa11.82□□□□□ -0.52
TUBGCP4-210ENST00000565548 LHX6Q9UPM6 363 aa11.82□□□□□ -0.52
TUBGCP4-210ENST00000565548 MOXD2PA6NHM9 499 aa11.81□□□□□ -0.52
TUBGCP4-210ENST00000565548 RIMBP2O15034 1052 aa11.81□□□□□ -0.52
TUBGCP4-210ENST00000565548 DNAJB2P25686 324 aa11.81□□□□□ -0.52
TUBGCP4-210ENST00000565548 GJA5P36382 358 aa11.81□□□□□ -0.52
TUBGCP4-210ENST00000565548 NUTM1Q86Y26 1132 aa11.81□□□□□ -0.52
TUBGCP4-210ENST00000565548 DDX11L8A8MPP1 907 aa11.8□□□□□ -0.52
TUBGCP4-210ENST00000565548 PPP1R3GB7ZBB8 358 aa11.8□□□□□ -0.52
TUBGCP4-210ENST00000565548 LILRB3O75022 631 aa11.8□□□□□ -0.52
TUBGCP4-210ENST00000565548 PPP4R3BQ5MIZ7 849 aa11.8□□□□□ -0.52
TUBGCP4-210ENST00000565548 GDPD2Q9HCC8 539 aa11.8□□□□□ -0.52
TUBGCP4-210ENST00000565548 NESP48681 1621 aa11.79□□□□□ -0.52
TUBGCP4-210ENST00000565548 ZBTB7CA1YPR0 619 aa11.79□□□□□ -0.52
TUBGCP4-210ENST00000565548 POTEJP0CG39 1038 aa11.79□□□□□ -0.52
TUBGCP4-210ENST00000565548 QPCTQ16769 361 aa11.79□□□□□ -0.52
TUBGCP4-210ENST00000565548 TRAIPQ9BWF2 469 aa11.79□□□□□ -0.52
TUBGCP4-210ENST00000565548 TMEM134Q9H6X4 195 aa11.79□□□□□ -0.52
TUBGCP4-210ENST00000565548 NDUFV2P19404 249 aa11.78□□□□□ -0.52
TUBGCP4-210ENST00000565548 TATDN2Q93075 761 aa11.78□□□□□ -0.52
TUBGCP4-210ENST00000565548 PCDHB15Q9Y5E8 787 aa11.78□□□□□ -0.52
TUBGCP4-210ENST00000565548 NBPF26B4DH59 902 aa11.77□□□□□ -0.53
TUBGCP4-210ENST00000565548 CSPP1Q1MSJ5 1256 aa11.77□□□□□ -0.53
TUBGCP4-210ENST00000565548 PNMA3Q9UL41 463 aa11.77□□□□□ -0.53
TUBGCP4-210ENST00000565548 PSDA5PKW4 1024 aaPredicted RBP11.76□□□□□ -0.53
TUBGCP4-210ENST00000565548 TRIM6-TRIM34B2RNG4 842 aa11.76□□□□□ -0.53
TUBGCP4-210ENST00000565548 PTPREP23469 700 aa11.76□□□□□ -0.53
TUBGCP4-210ENST00000565548 RTL5Q5HYW3 569 aaPredicted RBP11.76□□□□□ -0.53
TUBGCP4-210ENST00000565548 THOC2Q8NI27 1593 aaKnown RBP11.74□□□□□ -0.53
TUBGCP4-210ENST00000565548 AP1G2O75843 785 aa11.73□□□□□ -0.53
TUBGCP4-210ENST00000565548 PRPF38BQ5VTL8 546 aaKnown RBP11.73□□□□□ -0.53
TUBGCP4-210ENST00000565548 PACS2Q86VP3 889 aa11.73□□□□□ -0.53
TUBGCP4-210ENST00000565548 ABL2P42684 1182 aa11.72□□□□□ -0.53
TUBGCP4-210ENST00000565548 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
TUBGCP4-210ENST00000565548 ZNF710Q8N1W2 664 aa11.72□□□□□ -0.53
TUBGCP4-210ENST00000565548 TBC1D2BQ9UPU7 963 aa11.72□□□□□ -0.53
TUBGCP4-210ENST00000565548 USP17L8P0C7I0 530 aa11.71□□□□□ -0.53
TUBGCP4-210ENST00000565548 CABLES1Q8TDN4 633 aa11.71□□□□□ -0.53
TUBGCP4-210ENST00000565548 PRM3Q9NNZ6 103 aa11.71□□□□□ -0.53
TUBGCP4-210ENST00000565548 POM121CA8CG34 1229 aa11.7□□□□□ -0.54
TUBGCP4-210ENST00000565548 KDM4AO75164 1064 aa11.7□□□□□ -0.54
TUBGCP4-210ENST00000565548 NCAPD3P42695 1498 aa11.7□□□□□ -0.54
TUBGCP4-210ENST00000565548 SMAPO00193 183 aa11.69□□□□□ -0.54
TUBGCP4-210ENST00000565548 RDH13Q8NBN7 331 aa11.69□□□□□ -0.54
TUBGCP4-210ENST00000565548 SMARCA2P51531 1590 aa11.68□□□□□ -0.54
TUBGCP4-210ENST00000565548 NUTM2BA6NNL0 878 aaPredicted RBP11.68□□□□□ -0.54
TUBGCP4-210ENST00000565548 NUTM2EB1AL46 878 aaPredicted RBP11.68□□□□□ -0.54
TUBGCP4-210ENST00000565548 NUTM2DQ5VT03 806 aaPredicted RBP11.68□□□□□ -0.54
TUBGCP4-210ENST00000565548 NUTM2AQ8IVF1 878 aaPredicted RBP11.68□□□□□ -0.54
TUBGCP4-210ENST00000565548 RETREG2Q8NC44 543 aa11.68□□□□□ -0.54
TUBGCP4-210ENST00000565548 GJD4Q96KN9 370 aaPredicted RBP11.68□□□□□ -0.54
TUBGCP4-210ENST00000565548 CALR3Q96L12 384 aaKnown RBP11.68□□□□□ -0.54
TUBGCP4-210ENST00000565548 POTEB2H3BUK9 544 aa11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 RANGAP1P46060 587 aaPredicted RBP11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 GCGRP47871 477 aa11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 USP46P62068 366 aa11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 PROX2Q3B8N5 592 aa11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 KCTD17Q8N5Z5 321 aa11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 SP7Q8TDD2 431 aaPredicted RBP11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 GLMNQ92990 594 aa11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 ZBTB3Q9H5J0 574 aa11.67□□□□□ -0.54
TUBGCP4-210ENST00000565548 HOXA2O43364 376 aa11.66□□□□□ -0.54
TUBGCP4-210ENST00000565548 PPP1R15AO75807 674 aaPredicted RBP11.66□□□□□ -0.54
TUBGCP4-210ENST00000565548 CCDC9Q9Y3X0 531 aaKnown RBP11.66□□□□□ -0.54
TUBGCP4-210ENST00000565548 NPM2Q86SE8 214 aaKnown RBP11.65□□□□□ -0.54
TUBGCP4-210ENST00000565548 IRF5Q13568 498 aa11.64□□□□□ -0.55
TUBGCP4-210ENST00000565548 PCDHGC3Q9UN70 934 aa11.64□□□□□ -0.55
TUBGCP4-210ENST00000565548 ATAD2BQ9ULI0 1458 aa11.63□□□□□ -0.55
TUBGCP4-210ENST00000565548 FDX1P10109 184 aa11.63□□□□□ -0.55
TUBGCP4-210ENST00000565548 NDUFB9Q9Y6M9 179 aa11.63□□□□□ -0.55
TUBGCP4-210ENST00000565548 KIF21AQ7Z4S6 1674 aa11.62□□□□□ -0.55
TUBGCP4-210ENST00000565548 SLC10A3P09131 477 aa11.62□□□□□ -0.55
TUBGCP4-210ENST00000565548 HOXB1P14653 301 aaPredicted RBP11.62□□□□□ -0.55
TUBGCP4-210ENST00000565548 RSPH4AQ5TD94 716 aa11.61□□□□□ -0.55
TUBGCP4-210ENST00000565548 KIAA1468Q9P260 1216 aa11.61□□□□□ -0.55
TUBGCP4-210ENST00000565548 GPR37L1O60883 481 aa11.6□□□□□ -0.55
TUBGCP4-210ENST00000565548 GUCA2AQ02747 115 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms