RNA–Protein interactions for RNA: ENST00000565296.5

CCNDBP1-206, Transcript of cyclin D1 binding protein 1, humanhuman

TSL 2

Gene CCNDBP1, Length 1,831 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNDBP1-206ENST00000565296 RGL3Q3MIN7 710 aa20.26■□□□□ 0.83
CCNDBP1-206ENST00000565296 NUTM2DQ5VT03 806 aaPredicted RBP20.26■□□□□ 0.83
CCNDBP1-206ENST00000565296 KIF1BO60333 1816 aa20.26■□□□□ 0.83
CCNDBP1-206ENST00000565296 SIN3AQ96ST3 1273 aa20.25■□□□□ 0.83
CCNDBP1-206ENST00000565296 EID1Q9Y6B2 187 aa20.25■□□□□ 0.83
CCNDBP1-206ENST00000565296 MED14O60244 1454 aa20.25■□□□□ 0.83
CCNDBP1-206ENST00000565296 NEXMIFQ5QGS0 1516 aa20.24■□□□□ 0.83
CCNDBP1-206ENST00000565296 NPHP4O75161 1426 aaPredicted RBP20.22■□□□□ 0.83
CCNDBP1-206ENST00000565296 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.22■□□□□ 0.83
CCNDBP1-206ENST00000565296 RPGRIP1LQ68CZ1 1315 aa20.22■□□□□ 0.83
CCNDBP1-206ENST00000565296 POLR1AO95602 1720 aaPredicted RBP20.21■□□□□ 0.83
CCNDBP1-206ENST00000565296 HDGFP51858 240 aaKnown RBP20.2■□□□□ 0.82
CCNDBP1-206ENST00000565296 DMRT2Q9Y5R5 561 aa20.2■□□□□ 0.82
CCNDBP1-206ENST00000565296 PPP1R15AO75807 674 aaPredicted RBP20.19■□□□□ 0.82
CCNDBP1-206ENST00000565296 SENP3Q9H4L4 574 aaPredicted RBP20.19■□□□□ 0.82
CCNDBP1-206ENST00000565296 PLEKHG1Q9ULL1 1385 aa20.19■□□□□ 0.82
CCNDBP1-206ENST00000565296 NEUROD1Q13562 356 aa20.18■□□□□ 0.82
CCNDBP1-206ENST00000565296 VGFO15240 615 aaPredicted RBP20.16■□□□□ 0.82
CCNDBP1-206ENST00000565296 IQGAP1P46940 1657 aa20.16■□□□□ 0.82
CCNDBP1-206ENST00000565296 ADGRF5Q8IZF2 1346 aa20.15■□□□□ 0.82
CCNDBP1-206ENST00000565296 SLC26A8Q96RN1 970 aa20.14■□□□□ 0.81
CCNDBP1-206ENST00000565296 PPLO60437 1756 aa20.14■□□□□ 0.81
CCNDBP1-206ENST00000565296 ADAMTS13Q76LX8 1427 aa20.13■□□□□ 0.81
CCNDBP1-206ENST00000565296 CCER1Q8TC90 406 aaPredicted RBP20.13■□□□□ 0.81
CCNDBP1-206ENST00000565296 IFT172Q9UG01 1749 aa20.12■□□□□ 0.81
CCNDBP1-206ENST00000565296 DCAF11Q8TEB1 546 aa20.12■□□□□ 0.81
CCNDBP1-206ENST00000565296 CLSPNQ9HAW4 1339 aa20.11■□□□□ 0.81
CCNDBP1-206ENST00000565296 BCANQ96GW7 911 aa20.11■□□□□ 0.81
CCNDBP1-206ENST00000565296 L3MBTL2Q969R5 705 aa20.11■□□□□ 0.81
CCNDBP1-206ENST00000565296 NRXN3Q9Y4C0 1643 aa20.11■□□□□ 0.81
CCNDBP1-206ENST00000565296 SETBP1Q9Y6X0 1596 aa20.11■□□□□ 0.81
CCNDBP1-206ENST00000565296 MYOM2P54296 1465 aa20.1■□□□□ 0.81
CCNDBP1-206ENST00000565296 NRXN1Q9ULB1 1477 aa20.1■□□□□ 0.81
CCNDBP1-206ENST00000565296 KDM2AQ9Y2K7 1162 aa20.09■□□□□ 0.81
CCNDBP1-206ENST00000565296 TBX22Q9Y458 520 aa20.09■□□□□ 0.81
CCNDBP1-206ENST00000565296 ZNF335Q9H4Z2 1342 aaPredicted RBP20.08■□□□□ 0.81
CCNDBP1-206ENST00000565296 PIK3C2GO75747 1445 aa20.08■□□□□ 0.8
CCNDBP1-206ENST00000565296 STAC3Q96MF2 364 aa20.05■□□□□ 0.8
CCNDBP1-206ENST00000565296 METP08581 1390 aa20.04■□□□□ 0.8
CCNDBP1-206ENST00000565296 ALKQ9UM73 1620 aa20.04■□□□□ 0.8
CCNDBP1-206ENST00000565296 DIP2AQ14689 1571 aa20.03■□□□□ 0.8
CCNDBP1-206ENST00000565296 TONSLQ96HA7 1378 aa20.02■□□□□ 0.8
CCNDBP1-206ENST00000565296 C14orf93Q9H972 538 aaKnown RBP20.02■□□□□ 0.79
CCNDBP1-206ENST00000565296 LTBP4Q8N2S1 1624 aa20.01■□□□□ 0.79
CCNDBP1-206ENST00000565296 CFAP70Q5T0N1 1121 aa20.01■□□□□ 0.79
CCNDBP1-206ENST00000565296 PTPRUQ92729 1446 aa20■□□□□ 0.79
CCNDBP1-206ENST00000565296 SETD1AO15047 1707 aaKnown RBP20■□□□□ 0.79
CCNDBP1-206ENST00000565296 PRAG1Q86YV5 1406 aa20■□□□□ 0.79
CCNDBP1-206ENST00000565296 KCNA6P17658 529 aa19.99■□□□□ 0.79
CCNDBP1-206ENST00000565296 PIK3R4Q99570 1358 aa19.99■□□□□ 0.79
CCNDBP1-206ENST00000565296 STRCP1A6NGW2 1772 aa19.98■□□□□ 0.79
CCNDBP1-206ENST00000565296 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
CCNDBP1-206ENST00000565296 TMEM132EQ6IEE7 984 aa19.97■□□□□ 0.79
CCNDBP1-206ENST00000565296 AMOTL2Q9Y2J4 779 aa19.96■□□□□ 0.79
CCNDBP1-206ENST00000565296 NWD1Q149M9 1564 aa19.96■□□□□ 0.79
CCNDBP1-206ENST00000565296 NBPF8Q3BBV2 869 aa19.95■□□□□ 0.78
CCNDBP1-206ENST00000565296 TIMELESSQ9UNS1 1208 aa19.93■□□□□ 0.78
CCNDBP1-206ENST00000565296 ADGRB1O14514 1584 aa19.93■□□□□ 0.78
CCNDBP1-206ENST00000565296 CHD2O14647 1828 aaKnown RBP19.93■□□□□ 0.78
CCNDBP1-206ENST00000565296 CPS1P31327 1500 aa19.92■□□□□ 0.78
CCNDBP1-206ENST00000565296 LAMC1P11047 1609 aa19.91■□□□□ 0.78
CCNDBP1-206ENST00000565296 LRRC7Q96NW7 1537 aa19.91■□□□□ 0.78
CCNDBP1-206ENST00000565296 XRN1Q8IZH2 1706 aaKnown RBP19.91■□□□□ 0.78
CCNDBP1-206ENST00000565296 NBPF1Q3BBV0 1214 aa19.91■□□□□ 0.78
CCNDBP1-206ENST00000565296 NKTRP30414 1462 aaKnown RBP19.9■□□□□ 0.78
CCNDBP1-206ENST00000565296 RBM33Q96EV2 1170 aaKnown RBP19.9■□□□□ 0.78
CCNDBP1-206ENST00000565296 LRPPRCP42704 1394 aaKnown RBP19.9■□□□□ 0.78
CCNDBP1-206ENST00000565296 YTHDC2Q9H6S0 1430 aaKnown RBP19.89■□□□□ 0.77
CCNDBP1-206ENST00000565296 STK26Q9P289 416 aa19.89■□□□□ 0.77
CCNDBP1-206ENST00000565296 CERKQ8TCT0 537 aa19.88■□□□□ 0.77
CCNDBP1-206ENST00000565296 ABCC11Q96J66 1382 aa19.88■□□□□ 0.77
CCNDBP1-206ENST00000565296 ROBO2Q9HCK4 1378 aa19.88■□□□□ 0.77
CCNDBP1-206ENST00000565296 PROSER2Q86WR7 435 aaPredicted RBP19.88■□□□□ 0.77
CCNDBP1-206ENST00000565296 TMEM94Q12767 1356 aa19.88■□□□□ 0.77
CCNDBP1-206ENST00000565296 TECPR2O15040 1411 aa19.87■□□□□ 0.77
CCNDBP1-206ENST00000565296 KIAA1210Q9ULL0 1709 aa19.86■□□□□ 0.77
CCNDBP1-206ENST00000565296 PTCH1Q13635 1447 aa19.86■□□□□ 0.77
CCNDBP1-206ENST00000565296 TRPM1Q7Z4N2 1603 aa19.84■□□□□ 0.77
CCNDBP1-206ENST00000565296 TRAK1Q9UPV9 953 aa19.83■□□□□ 0.76
CCNDBP1-206ENST00000565296 PLEKHH1Q9ULM0 1364 aa19.82■□□□□ 0.76
CCNDBP1-206ENST00000565296 RALGAPBQ86X10 1494 aa19.81■□□□□ 0.76
CCNDBP1-206ENST00000565296 WAPLQ7Z5K2 1190 aa19.81■□□□□ 0.76
CCNDBP1-206ENST00000565296 ROCK2O75116 1388 aaKnown RBP19.81■□□□□ 0.76
CCNDBP1-206ENST00000565296 GPRASP1Q5JY77 1395 aa19.81■□□□□ 0.76
CCNDBP1-206ENST00000565296 SIRT1Q96EB6 747 aa19.81■□□□□ 0.76
CCNDBP1-206ENST00000565296 XIRP1Q702N8 1843 aaKnown RBP19.8■□□□□ 0.76
CCNDBP1-206ENST00000565296 IQSEC2Q5JU85 1478 aa19.8■□□□□ 0.76
CCNDBP1-206ENST00000565296 KNDC1Q76NI1 1749 aa19.79■□□□□ 0.76
CCNDBP1-206ENST00000565296 FAM135BQ49AJ0 1406 aa19.79■□□□□ 0.76
CCNDBP1-206ENST00000565296 NCOA3Q9Y6Q9 1424 aa19.79■□□□□ 0.76
CCNDBP1-206ENST00000565296 DLC1Q96QB1 1528 aa19.79■□□□□ 0.76
CCNDBP1-206ENST00000565296 PRAM1Q96QH2 718 aa19.78■□□□□ 0.76
CCNDBP1-206ENST00000565296 C19orf44Q9H6X5 657 aa19.75■□□□□ 0.75
CCNDBP1-206ENST00000565296 C14orf37Q86TY3 774 aa19.74■□□□□ 0.75
CCNDBP1-206ENST00000565296 CARD11Q9BXL7 1154 aa19.74■□□□□ 0.75
CCNDBP1-206ENST00000565296 ADGRL3Q9HAR2 1447 aa19.74■□□□□ 0.75
CCNDBP1-206ENST00000565296 SAFB2Q14151 953 aaKnown RBP eCLIP19.74■□□□□ 0.75
CCNDBP1-206ENST00000565296 PELP1Q8IZL8 1130 aaKnown RBP19.74■□□□□ 0.75
CCNDBP1-206ENST00000565296 POGKQ9P215 609 aa19.73■□□□□ 0.75
CCNDBP1-206ENST00000565296 MSH6P52701 1360 aa19.73■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms