RNA–Protein interactions for RNA: ENST00000565256.1

SNHG20-203, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best)

Gene SNHG20, Length 1,234 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-203ENST00000565256 KIF1BO60333 1816 aa19.06■□□□□ 0.64
SNHG20-203ENST00000565256 SPATA31E1Q6ZUB1 1445 aa19.06■□□□□ 0.64
SNHG20-203ENST00000565256 POLR1AO95602 1720 aaPredicted RBP19.05■□□□□ 0.64
SNHG20-203ENST00000565256 FBXO31Q5XUX0 539 aaPredicted RBP19.05■□□□□ 0.64
SNHG20-203ENST00000565256 PIK3C2BO00750 1634 aa19.04■□□□□ 0.64
SNHG20-203ENST00000565256 RGL3Q3MIN7 710 aa19.04■□□□□ 0.64
SNHG20-203ENST00000565256 ERVK-7P63135 1459 aa19.03■□□□□ 0.64
SNHG20-203ENST00000565256 TNRQ92752 1358 aa19.01■□□□□ 0.63
SNHG20-203ENST00000565256 NBPF8Q3BBV2 869 aa19■□□□□ 0.63
SNHG20-203ENST00000565256 DCAF11Q8TEB1 546 aa19■□□□□ 0.63
SNHG20-203ENST00000565256 SLC52A1Q9NWF4 448 aa19■□□□□ 0.63
SNHG20-203ENST00000565256 IDI1Q13907 227 aa18.99■□□□□ 0.63
SNHG20-203ENST00000565256 KDM2AQ9Y2K7 1162 aa18.99■□□□□ 0.63
SNHG20-203ENST00000565256 PHF23Q9BUL5 403 aaPredicted RBP18.98■□□□□ 0.63
SNHG20-203ENST00000565256 MED14O60244 1454 aa18.97■□□□□ 0.63
SNHG20-203ENST00000565256 ADGRB3O60242 1522 aa18.97■□□□□ 0.63
SNHG20-203ENST00000565256 NPHP4O75161 1426 aaPredicted RBP18.95■□□□□ 0.62
SNHG20-203ENST00000565256 CHGAP10645 457 aaKnown RBP18.95■□□□□ 0.62
SNHG20-203ENST00000565256 IFT172Q9UG01 1749 aa18.94■□□□□ 0.62
SNHG20-203ENST00000565256 STRCP1A6NGW2 1772 aa18.93■□□□□ 0.62
SNHG20-203ENST00000565256 MYO5BQ9ULV0 1848 aa18.93■□□□□ 0.62
SNHG20-203ENST00000565256 TMEM131LA2VDJ0 1609 aa18.93■□□□□ 0.62
SNHG20-203ENST00000565256 ANKLE2Q86XL3 938 aa18.93■□□□□ 0.62
SNHG20-203ENST00000565256 RGS17Q9UGC6 210 aaPredicted RBP18.93■□□□□ 0.62
SNHG20-203ENST00000565256 LRRC7Q96NW7 1537 aa18.93■□□□□ 0.62
SNHG20-203ENST00000565256 ZNF326Q5BKZ1 582 aaKnown RBP18.92■□□□□ 0.62
SNHG20-203ENST00000565256 STAC3Q96MF2 364 aa18.92■□□□□ 0.62
SNHG20-203ENST00000565256 PRAG1Q86YV5 1406 aa18.91■□□□□ 0.62
SNHG20-203ENST00000565256 NLRP1Q9C000 1473 aa18.9■□□□□ 0.62
SNHG20-203ENST00000565256 SENP3Q9H4L4 574 aaPredicted RBP18.9■□□□□ 0.62
SNHG20-203ENST00000565256 IQGAP1P46940 1657 aa18.89■□□□□ 0.61
SNHG20-203ENST00000565256 PPLO60437 1756 aa18.89■□□□□ 0.61
SNHG20-203ENST00000565256 RPGRIP1LQ68CZ1 1315 aa18.89■□□□□ 0.61
SNHG20-203ENST00000565256 ZNF316A6NFI3 1004 aaPredicted RBP18.88■□□□□ 0.61
SNHG20-203ENST00000565256 THEMISQ8N1K5 641 aaPredicted RBP18.88■□□□□ 0.61
SNHG20-203ENST00000565256 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
SNHG20-203ENST00000565256 MYOM2P54296 1465 aa18.86■□□□□ 0.61
SNHG20-203ENST00000565256 RALGAPBQ86X10 1494 aa18.86■□□□□ 0.61
SNHG20-203ENST00000565256 NEXMIFQ5QGS0 1516 aa18.84■□□□□ 0.61
SNHG20-203ENST00000565256 STAG3Q9UJ98 1225 aa18.84■□□□□ 0.61
SNHG20-203ENST00000565256 KDM5AP29375 1690 aaKnown RBP18.84■□□□□ 0.61
SNHG20-203ENST00000565256 ADGRF5Q8IZF2 1346 aa18.83■□□□□ 0.61
SNHG20-203ENST00000565256 NRXN1Q9ULB1 1477 aa18.83■□□□□ 0.6
SNHG20-203ENST00000565256 UBR1Q8IWV7 1749 aa18.82■□□□□ 0.6
SNHG20-203ENST00000565256 KIAA1210Q9ULL0 1709 aa18.8■□□□□ 0.6
SNHG20-203ENST00000565256 VGFO15240 615 aaPredicted RBP18.8■□□□□ 0.6
SNHG20-203ENST00000565256 NBPF1Q3BBV0 1214 aa18.8■□□□□ 0.6
SNHG20-203ENST00000565256 ZFYVE9O95405 1425 aa18.8■□□□□ 0.6
SNHG20-203ENST00000565256 EIF4G2P78344 907 aaKnown RBP eCLIP18.78■□□□□ 0.6
SNHG20-203ENST00000565256 NUTM2DQ5VT03 806 aaPredicted RBP18.78■□□□□ 0.6
SNHG20-203ENST00000565256 CARD11Q9BXL7 1154 aa18.78■□□□□ 0.6
SNHG20-203ENST00000565256 ROCK2O75116 1388 aaKnown RBP18.78■□□□□ 0.6
SNHG20-203ENST00000565256 GPRASP1Q5JY77 1395 aa18.78■□□□□ 0.6
SNHG20-203ENST00000565256 HSPA5P11021 654 aaKnown RBP18.77■□□□□ 0.6
SNHG20-203ENST00000565256 POTEAQ6S8J7 498 aa18.77■□□□□ 0.6
SNHG20-203ENST00000565256 HIRIP3Q9BW71 556 aaPredicted RBP18.77■□□□□ 0.6
SNHG20-203ENST00000565256 LAMC1P11047 1609 aa18.77■□□□□ 0.6
SNHG20-203ENST00000565256 PIK3C2GO75747 1445 aa18.75■□□□□ 0.59
SNHG20-203ENST00000565256 RIMS2Q9UQ26 1411 aa18.75■□□□□ 0.59
SNHG20-203ENST00000565256 XIRP1Q702N8 1843 aaKnown RBP18.75■□□□□ 0.59
SNHG20-203ENST00000565256 CFAP70Q5T0N1 1121 aa18.75■□□□□ 0.59
SNHG20-203ENST00000565256 C14orf93Q9H972 538 aaKnown RBP18.74■□□□□ 0.59
SNHG20-203ENST00000565256 SCAF11Q99590 1463 aaKnown RBP18.73■□□□□ 0.59
SNHG20-203ENST00000565256 USP47Q96K76 1375 aa18.73■□□□□ 0.59
SNHG20-203ENST00000565256 ARHGAP23Q9P227 1491 aa18.72■□□□□ 0.59
SNHG20-203ENST00000565256 TMEM2Q9UHN6 1383 aa18.72■□□□□ 0.59
SNHG20-203ENST00000565256 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.72■□□□□ 0.59
SNHG20-203ENST00000565256 LTKP29376 864 aa18.71■□□□□ 0.59
SNHG20-203ENST00000565256 HDGFP51858 240 aaKnown RBP18.71■□□□□ 0.59
SNHG20-203ENST00000565256 FAM135BQ49AJ0 1406 aa18.71■□□□□ 0.59
SNHG20-203ENST00000565256 SLIT1O75093 1534 aa18.7■□□□□ 0.58
SNHG20-203ENST00000565256 SETBP1Q9Y6X0 1596 aa18.69■□□□□ 0.58
SNHG20-203ENST00000565256 ADGRB1O14514 1584 aa18.65■□□□□ 0.58
SNHG20-203ENST00000565256 ST20-MTHFSA0A0A6YYL1 179 aa18.65■□□□□ 0.58
SNHG20-203ENST00000565256 SETD1AO15047 1707 aaKnown RBP18.65■□□□□ 0.58
SNHG20-203ENST00000565256 TMEM132EQ6IEE7 984 aa18.64■□□□□ 0.57
SNHG20-203ENST00000565256 TXNDC2Q86VQ3 553 aa18.64■□□□□ 0.57
SNHG20-203ENST00000565256 NRXN3Q9Y4C0 1643 aa18.63■□□□□ 0.57
SNHG20-203ENST00000565256 TMEM94Q12767 1356 aa18.63■□□□□ 0.57
SNHG20-203ENST00000565256 ROBO1Q9Y6N7 1651 aa18.63■□□□□ 0.57
SNHG20-203ENST00000565256 EID1Q9Y6B2 187 aa18.62■□□□□ 0.57
SNHG20-203ENST00000565256 ASXL1Q8IXJ9 1541 aa18.61■□□□□ 0.57
SNHG20-203ENST00000565256 C11orf95C9JLR9 678 aaPredicted RBP18.61■□□□□ 0.57
SNHG20-203ENST00000565256 PLEKHG1Q9ULL1 1385 aa18.6■□□□□ 0.57
SNHG20-203ENST00000565256 WASHC2AQ641Q2 1341 aa18.58■□□□□ 0.57
SNHG20-203ENST00000565256 DIEXFQ68CQ4 756 aaKnown RBP18.57■□□□□ 0.56
SNHG20-203ENST00000565256 RBM33Q96EV2 1170 aaKnown RBP18.57■□□□□ 0.56
SNHG20-203ENST00000565256 TESK2Q96S53 571 aa18.57■□□□□ 0.56
SNHG20-203ENST00000565256 TRAK1Q9UPV9 953 aa18.57■□□□□ 0.56
SNHG20-203ENST00000565256 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
SNHG20-203ENST00000565256 BCANQ96GW7 911 aa18.56■□□□□ 0.56
SNHG20-203ENST00000565256 ADAMTS13Q76LX8 1427 aa18.56■□□□□ 0.56
SNHG20-203ENST00000565256 CCDC7Q96M83 1385 aa18.55■□□□□ 0.56
SNHG20-203ENST00000565256 YTHDC2Q9H6S0 1430 aaKnown RBP18.55■□□□□ 0.56
SNHG20-203ENST00000565256 ARHGEF28Q8N1W1 1705 aaKnown RBP18.54■□□□□ 0.56
SNHG20-203ENST00000565256 KCNA6P17658 529 aa18.54■□□□□ 0.56
SNHG20-203ENST00000565256 KIF7Q2M1P5 1343 aa18.53■□□□□ 0.56
SNHG20-203ENST00000565256 DDX10Q13206 875 aaKnown RBP18.53■□□□□ 0.56
SNHG20-203ENST00000565256 STK26Q9P289 416 aa18.53■□□□□ 0.56
SNHG20-203ENST00000565256 METP08581 1390 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms