RNA–Protein interactions for RNA: ENST00000564814.1

GINS3-205, Transcript of GINS complex subunit 3, humanhuman

TSL 4

Gene GINS3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-205ENST00000564814 RPGRIP1LQ68CZ1 1315 aa10.85□□□□□ -0.67
GINS3-205ENST00000564814 PPLO60437 1756 aa10.85□□□□□ -0.67
GINS3-205ENST00000564814 SIN3AQ96ST3 1273 aa10.85□□□□□ -0.67
GINS3-205ENST00000564814 A2ML1A8K2U0 1454 aa10.85□□□□□ -0.67
GINS3-205ENST00000564814 NRXN1Q9ULB1 1477 aa10.85□□□□□ -0.67
GINS3-205ENST00000564814 IDI1Q13907 227 aa10.84□□□□□ -0.67
GINS3-205ENST00000564814 FBXO31Q5XUX0 539 aaPredicted RBP10.84□□□□□ -0.67
GINS3-205ENST00000564814 TONSLQ96HA7 1378 aa10.84□□□□□ -0.67
GINS3-205ENST00000564814 CEP170BQ9Y4F5 1589 aaPredicted RBP10.84□□□□□ -0.67
GINS3-205ENST00000564814 SLIT1O75093 1534 aa10.84□□□□□ -0.67
GINS3-205ENST00000564814 NEXMIFQ5QGS0 1516 aa10.84□□□□□ -0.67
GINS3-205ENST00000564814 ARHGAP23Q9P227 1491 aa10.83□□□□□ -0.68
GINS3-205ENST00000564814 MYO5BQ9ULV0 1848 aa10.83□□□□□ -0.68
GINS3-205ENST00000564814 KIAA1210Q9ULL0 1709 aa10.83□□□□□ -0.68
GINS3-205ENST00000564814 MED1Q15648 1581 aaPredicted RBP10.82□□□□□ -0.68
GINS3-205ENST00000564814 STRCQ7RTU9 1775 aa10.82□□□□□ -0.68
GINS3-205ENST00000564814 PPP1R15AO75807 674 aaPredicted RBP10.8□□□□□ -0.68
GINS3-205ENST00000564814 L3MBTL2Q969R5 705 aa10.8□□□□□ -0.68
GINS3-205ENST00000564814 LAMC1P11047 1609 aa10.8□□□□□ -0.68
GINS3-205ENST00000564814 PRAG1Q86YV5 1406 aa10.79□□□□□ -0.68
GINS3-205ENST00000564814 TMEM2Q9UHN6 1383 aa10.78□□□□□ -0.68
GINS3-205ENST00000564814 PIK3C2GO75747 1445 aa10.78□□□□□ -0.68
GINS3-205ENST00000564814 TRPM1Q7Z4N2 1603 aa10.78□□□□□ -0.68
GINS3-205ENST00000564814 NEUROD1Q13562 356 aa10.78□□□□□ -0.68
GINS3-205ENST00000564814 RALGAPBQ86X10 1494 aa10.78□□□□□ -0.68
GINS3-205ENST00000564814 GPRASP1Q5JY77 1395 aa10.77□□□□□ -0.68
GINS3-205ENST00000564814 SETBP1Q9Y6X0 1596 aa10.77□□□□□ -0.68
GINS3-205ENST00000564814 THEMISQ8N1K5 641 aaPredicted RBP10.76□□□□□ -0.69
GINS3-205ENST00000564814 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.76□□□□□ -0.69
GINS3-205ENST00000564814 DMRT2Q9Y5R5 561 aa10.76□□□□□ -0.69
GINS3-205ENST00000564814 RIMS2Q9UQ26 1411 aa10.75□□□□□ -0.69
GINS3-205ENST00000564814 DIP2AQ14689 1571 aa10.75□□□□□ -0.69
GINS3-205ENST00000564814 VGFO15240 615 aaPredicted RBP10.75□□□□□ -0.69
GINS3-205ENST00000564814 HDGFP51858 240 aaKnown RBP10.75□□□□□ -0.69
GINS3-205ENST00000564814 SETD1AO15047 1707 aaKnown RBP10.75□□□□□ -0.69
GINS3-205ENST00000564814 MED14O60244 1454 aa10.74□□□□□ -0.69
GINS3-205ENST00000564814 NRXN3Q9Y4C0 1643 aa10.74□□□□□ -0.69
GINS3-205ENST00000564814 POLR1AO95602 1720 aaPredicted RBP10.73□□□□□ -0.69
GINS3-205ENST00000564814 DCAF11Q8TEB1 546 aa10.73□□□□□ -0.69
GINS3-205ENST00000564814 PLEKHG1Q9ULL1 1385 aa10.73□□□□□ -0.69
GINS3-205ENST00000564814 SCAF11Q99590 1463 aaKnown RBP10.73□□□□□ -0.69
GINS3-205ENST00000564814 RGL3Q3MIN7 710 aa10.72□□□□□ -0.69
GINS3-205ENST00000564814 ADGRB1O14514 1584 aa10.72□□□□□ -0.69
GINS3-205ENST00000564814 NBPF8Q3BBV2 869 aa10.71□□□□□ -0.69
GINS3-205ENST00000564814 STAG3Q9UJ98 1225 aa10.71□□□□□ -0.69
GINS3-205ENST00000564814 ALKQ9UM73 1620 aa10.7□□□□□ -0.7
GINS3-205ENST00000564814 ADGRF5Q8IZF2 1346 aa10.7□□□□□ -0.7
GINS3-205ENST00000564814 C14orf93Q9H972 538 aaKnown RBP10.7□□□□□ -0.7
GINS3-205ENST00000564814 IQGAP1P46940 1657 aa10.69□□□□□ -0.7
GINS3-205ENST00000564814 ADAMTS13Q76LX8 1427 aa10.69□□□□□ -0.7
GINS3-205ENST00000564814 PIK3R4Q99570 1358 aa10.69□□□□□ -0.7
GINS3-205ENST00000564814 NCKAP5LQ9HCH0 1330 aa10.69□□□□□ -0.7
GINS3-205ENST00000564814 ZNF326Q5BKZ1 582 aaKnown RBP10.69□□□□□ -0.7
GINS3-205ENST00000564814 KNDC1Q76NI1 1749 aa10.69□□□□□ -0.7
GINS3-205ENST00000564814 ASXL1Q8IXJ9 1541 aa10.68□□□□□ -0.7
GINS3-205ENST00000564814 CHGAP10645 457 aaKnown RBP10.68□□□□□ -0.7
GINS3-205ENST00000564814 EID1Q9Y6B2 187 aa10.68□□□□□ -0.7
GINS3-205ENST00000564814 DLC1Q96QB1 1528 aa10.67□□□□□ -0.7
GINS3-205ENST00000564814 TECPR2O15040 1411 aa10.67□□□□□ -0.7
GINS3-205ENST00000564814 LTBP4Q8N2S1 1624 aa10.66□□□□□ -0.7
GINS3-205ENST00000564814 LTKP29376 864 aa10.66□□□□□ -0.7
GINS3-205ENST00000564814 IQSEC2Q5JU85 1478 aa10.66□□□□□ -0.7
GINS3-205ENST00000564814 ROCK2O75116 1388 aaKnown RBP10.65□□□□□ -0.7
GINS3-205ENST00000564814 SBNO2Q9Y2G9 1366 aa10.65□□□□□ -0.7
GINS3-205ENST00000564814 TXNDC2Q86VQ3 553 aa10.65□□□□□ -0.7
GINS3-205ENST00000564814 ANKLE2Q86XL3 938 aa10.65□□□□□ -0.7
GINS3-205ENST00000564814 KDM2AQ9Y2K7 1162 aa10.65□□□□□ -0.7
GINS3-205ENST00000564814 TBX22Q9Y458 520 aa10.65□□□□□ -0.7
GINS3-205ENST00000564814 CPS1P31327 1500 aa10.64□□□□□ -0.71
GINS3-205ENST00000564814 NPHP4O75161 1426 aaPredicted RBP10.64□□□□□ -0.71
GINS3-205ENST00000564814 NWD1Q149M9 1564 aa10.64□□□□□ -0.71
GINS3-205ENST00000564814 XRN1Q8IZH2 1706 aaKnown RBP10.64□□□□□ -0.71
GINS3-205ENST00000564814 ARHGEF28Q8N1W1 1705 aaKnown RBP10.64□□□□□ -0.71
GINS3-205ENST00000564814 ABCC11Q96J66 1382 aa10.64□□□□□ -0.71
GINS3-205ENST00000564814 ZNF335Q9H4Z2 1342 aaPredicted RBP10.63□□□□□ -0.71
GINS3-205ENST00000564814 SIRT1Q96EB6 747 aa10.63□□□□□ -0.71
GINS3-205ENST00000564814 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
GINS3-205ENST00000564814 CHD2O14647 1828 aaKnown RBP10.63□□□□□ -0.71
GINS3-205ENST00000564814 PTCH1Q13635 1447 aa10.62□□□□□ -0.71
GINS3-205ENST00000564814 FAM135BQ49AJ0 1406 aa10.62□□□□□ -0.71
GINS3-205ENST00000564814 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
GINS3-205ENST00000564814 CFAP70Q5T0N1 1121 aa10.62□□□□□ -0.71
GINS3-205ENST00000564814 EIF3AQ14152 1382 aaKnown RBP10.62□□□□□ -0.71
GINS3-205ENST00000564814 YTHDC2Q9H6S0 1430 aaKnown RBP10.61□□□□□ -0.71
GINS3-205ENST00000564814 NBPF1Q3BBV0 1214 aa10.61□□□□□ -0.71
GINS3-205ENST00000564814 CARD11Q9BXL7 1154 aa10.61□□□□□ -0.71
GINS3-205ENST00000564814 USP47Q96K76 1375 aa10.61□□□□□ -0.71
GINS3-205ENST00000564814 EIF4G2P78344 907 aaKnown RBP eCLIP10.6□□□□□ -0.71
GINS3-205ENST00000564814 METP08581 1390 aa10.6□□□□□ -0.71
GINS3-205ENST00000564814 NKTRP30414 1462 aaKnown RBP10.59□□□□□ -0.71
GINS3-205ENST00000564814 SRCAPQ6ZRS2 3230 aa10.58□□□□□ -0.72
GINS3-205ENST00000564814 ADGRB2O60241 1585 aa10.58□□□□□ -0.72
GINS3-205ENST00000564814 UBAP1LF5GYI3 381 aa10.58□□□□□ -0.72
GINS3-205ENST00000564814 PTPRUQ92729 1446 aa10.58□□□□□ -0.72
GINS3-205ENST00000564814 NCOA3Q9Y6Q9 1424 aa10.57□□□□□ -0.72
GINS3-205ENST00000564814 NUTM2DQ5VT03 806 aaPredicted RBP10.56□□□□□ -0.72
GINS3-205ENST00000564814 PUS7Q96PZ0 661 aaKnown RBP10.56□□□□□ -0.72
GINS3-205ENST00000564814 QRICH2Q9H0J4 1663 aa10.56□□□□□ -0.72
GINS3-205ENST00000564814 TESK2Q96S53 571 aa10.55□□□□□ -0.72
GINS3-205ENST00000564814 HSPA5P11021 654 aaKnown RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms