RNA–Protein interactions for RNA: ENST00000564778.5

SIN3A-205, Transcript of SIN3 transcription regulator family member A, humanhuman

TSL 2

Gene SIN3A, Length 617 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-205ENST00000564778 PPP1R15AO75807 674 aaPredicted RBP14.17□□□□□ -0.14
SIN3A-205ENST00000564778 ZFYVE9O95405 1425 aa14.16□□□□□ -0.14
SIN3A-205ENST00000564778 PRAG1Q86YV5 1406 aa14.16□□□□□ -0.14
SIN3A-205ENST00000564778 SLIT1O75093 1534 aa14.15□□□□□ -0.14
SIN3A-205ENST00000564778 ARHGAP23Q9P227 1491 aa14.15□□□□□ -0.14
SIN3A-205ENST00000564778 RGL3Q3MIN7 710 aa14.15□□□□□ -0.14
SIN3A-205ENST00000564778 CHGAP10645 457 aaKnown RBP14.13□□□□□ -0.15
SIN3A-205ENST00000564778 DCAF11Q8TEB1 546 aa14.13□□□□□ -0.15
SIN3A-205ENST00000564778 RALGAPBQ86X10 1494 aa14.12□□□□□ -0.15
SIN3A-205ENST00000564778 TMEM2Q9UHN6 1383 aa14.12□□□□□ -0.15
SIN3A-205ENST00000564778 PIK3C2GO75747 1445 aa14.12□□□□□ -0.15
SIN3A-205ENST00000564778 RIMS2Q9UQ26 1411 aa14.12□□□□□ -0.15
SIN3A-205ENST00000564778 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
SIN3A-205ENST00000564778 ZNF326Q5BKZ1 582 aaKnown RBP14.11□□□□□ -0.15
SIN3A-205ENST00000564778 STAG3Q9UJ98 1225 aa14.11□□□□□ -0.15
SIN3A-205ENST00000564778 TRPM1Q7Z4N2 1603 aa14.11□□□□□ -0.15
SIN3A-205ENST00000564778 NBPF8Q3BBV2 869 aa14.1□□□□□ -0.15
SIN3A-205ENST00000564778 LAMC1P11047 1609 aa14.09□□□□□ -0.15
SIN3A-205ENST00000564778 DMRT2Q9Y5R5 561 aa14.09□□□□□ -0.15
SIN3A-205ENST00000564778 STRCQ7RTU9 1775 aa14.08□□□□□ -0.16
SIN3A-205ENST00000564778 ADGRF5Q8IZF2 1346 aa14.08□□□□□ -0.16
SIN3A-205ENST00000564778 SETBP1Q9Y6X0 1596 aa14.08□□□□□ -0.16
SIN3A-205ENST00000564778 GPRASP1Q5JY77 1395 aa14.08□□□□□ -0.16
SIN3A-205ENST00000564778 VGFO15240 615 aaPredicted RBP14.07□□□□□ -0.16
SIN3A-205ENST00000564778 THEMISQ8N1K5 641 aaPredicted RBP14.07□□□□□ -0.16
SIN3A-205ENST00000564778 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.07□□□□□ -0.16
SIN3A-205ENST00000564778 NRXN3Q9Y4C0 1643 aa14.06□□□□□ -0.16
SIN3A-205ENST00000564778 ILDR1Q86SU0 546 aaPredicted RBP14.06□□□□□ -0.16
SIN3A-205ENST00000564778 KDM2AQ9Y2K7 1162 aa14.06□□□□□ -0.16
SIN3A-205ENST00000564778 SCAF11Q99590 1463 aaKnown RBP14.06□□□□□ -0.16
SIN3A-205ENST00000564778 PLEKHG1Q9ULL1 1385 aa14.05□□□□□ -0.16
SIN3A-205ENST00000564778 SETD1AO15047 1707 aaKnown RBP14.04□□□□□ -0.16
SIN3A-205ENST00000564778 HDGFP51858 240 aaKnown RBP14.04□□□□□ -0.16
SIN3A-205ENST00000564778 ADGRB1O14514 1584 aa14.04□□□□□ -0.16
SIN3A-205ENST00000564778 IQGAP1P46940 1657 aa14.04□□□□□ -0.16
SIN3A-205ENST00000564778 POLR1AO95602 1720 aaPredicted RBP14.03□□□□□ -0.16
SIN3A-205ENST00000564778 DIP2AQ14689 1571 aa14.02□□□□□ -0.16
SIN3A-205ENST00000564778 ASXL1Q8IXJ9 1541 aa14.02□□□□□ -0.16
SIN3A-205ENST00000564778 C14orf93Q9H972 538 aaKnown RBP14.02□□□□□ -0.17
SIN3A-205ENST00000564778 ALKQ9UM73 1620 aa14.01□□□□□ -0.17
SIN3A-205ENST00000564778 MED14O60244 1454 aa14.01□□□□□ -0.17
SIN3A-205ENST00000564778 ROCK2O75116 1388 aaKnown RBP14.01□□□□□ -0.17
SIN3A-205ENST00000564778 LTKP29376 864 aa14.01□□□□□ -0.17
SIN3A-205ENST00000564778 ADAMTS13Q76LX8 1427 aa14□□□□□ -0.17
SIN3A-205ENST00000564778 NUTM2DQ5VT03 806 aaPredicted RBP14□□□□□ -0.17
SIN3A-205ENST00000564778 EID1Q9Y6B2 187 aa14□□□□□ -0.17
SIN3A-205ENST00000564778 TXNDC2Q86VQ3 553 aa13.99□□□□□ -0.17
SIN3A-205ENST00000564778 CFAP70Q5T0N1 1121 aa13.98□□□□□ -0.17
SIN3A-205ENST00000564778 NBPF1Q3BBV0 1214 aa13.97□□□□□ -0.17
SIN3A-205ENST00000564778 ANKLE2Q86XL3 938 aa13.97□□□□□ -0.17
SIN3A-205ENST00000564778 USP47Q96K76 1375 aa13.96□□□□□ -0.18
SIN3A-205ENST00000564778 NCKAP5LQ9HCH0 1330 aa13.95□□□□□ -0.18
SIN3A-205ENST00000564778 CARD11Q9BXL7 1154 aa13.95□□□□□ -0.18
SIN3A-205ENST00000564778 NPHP4O75161 1426 aaPredicted RBP13.95□□□□□ -0.18
SIN3A-205ENST00000564778 KNDC1Q76NI1 1749 aa13.95□□□□□ -0.18
SIN3A-205ENST00000564778 TECPR2O15040 1411 aa13.94□□□□□ -0.18
SIN3A-205ENST00000564778 DLC1Q96QB1 1528 aa13.94□□□□□ -0.18
SIN3A-205ENST00000564778 ARHGEF28Q8N1W1 1705 aaKnown RBP13.93□□□□□ -0.18
SIN3A-205ENST00000564778 YTHDC2Q9H6S0 1430 aaKnown RBP13.93□□□□□ -0.18
SIN3A-205ENST00000564778 CERKQ8TCT0 537 aa13.93□□□□□ -0.18
SIN3A-205ENST00000564778 FBXO41Q8TF61 875 aa13.93□□□□□ -0.18
SIN3A-205ENST00000564778 PIK3R4Q99570 1358 aa13.93□□□□□ -0.18
SIN3A-205ENST00000564778 EIF4G2P78344 907 aaKnown RBP eCLIP13.92□□□□□ -0.18
SIN3A-205ENST00000564778 TBX22Q9Y458 520 aa13.92□□□□□ -0.18
SIN3A-205ENST00000564778 METP08581 1390 aa13.92□□□□□ -0.18
SIN3A-205ENST00000564778 LRPPRCP42704 1394 aaKnown RBP13.92□□□□□ -0.18
SIN3A-205ENST00000564778 EIF3AQ14152 1382 aaKnown RBP13.92□□□□□ -0.18
SIN3A-205ENST00000564778 CPS1P31327 1500 aa13.91□□□□□ -0.18
SIN3A-205ENST00000564778 XRN1Q8IZH2 1706 aaKnown RBP13.91□□□□□ -0.18
SIN3A-205ENST00000564778 ABCC11Q96J66 1382 aa13.9□□□□□ -0.18
SIN3A-205ENST00000564778 NWD1Q149M9 1564 aa13.89□□□□□ -0.19
SIN3A-205ENST00000564778 HSPA5P11021 654 aaKnown RBP13.89□□□□□ -0.19
SIN3A-205ENST00000564778 TMEM132EQ6IEE7 984 aa13.89□□□□□ -0.19
SIN3A-205ENST00000564778 LTBP4Q8N2S1 1624 aa13.89□□□□□ -0.19
SIN3A-205ENST00000564778 PTCH1Q13635 1447 aa13.89□□□□□ -0.19
SIN3A-205ENST00000564778 SBNO2Q9Y2G9 1366 aa13.88□□□□□ -0.19
SIN3A-205ENST00000564778 PTPRUQ92729 1446 aa13.88□□□□□ -0.19
SIN3A-205ENST00000564778 IQSEC2Q5JU85 1478 aa13.87□□□□□ -0.19
SIN3A-205ENST00000564778 BCANQ96GW7 911 aa13.87□□□□□ -0.19
SIN3A-205ENST00000564778 SLC26A8Q96RN1 970 aa13.87□□□□□ -0.19
SIN3A-205ENST00000564778 FAM135BQ49AJ0 1406 aa13.87□□□□□ -0.19
SIN3A-205ENST00000564778 CHD2O14647 1828 aaKnown RBP13.87□□□□□ -0.19
SIN3A-205ENST00000564778 QRICH2Q9H0J4 1663 aa13.85□□□□□ -0.19
SIN3A-205ENST00000564778 ST20-MTHFSA0A0A6YYL1 179 aa13.85□□□□□ -0.19
SIN3A-205ENST00000564778 SIRT1Q96EB6 747 aa13.85□□□□□ -0.19
SIN3A-205ENST00000564778 SENP3Q9H4L4 574 aaPredicted RBP13.85□□□□□ -0.19
SIN3A-205ENST00000564778 ZNF335Q9H4Z2 1342 aaPredicted RBP13.85□□□□□ -0.19
SIN3A-205ENST00000564778 TESK2Q96S53 571 aa13.84□□□□□ -0.19
SIN3A-205ENST00000564778 TRAK1Q9UPV9 953 aa13.84□□□□□ -0.19
SIN3A-205ENST00000564778 CENPJQ9HC77 1338 aaPredicted RBP13.84□□□□□ -0.19
SIN3A-205ENST00000564778 NKTRP30414 1462 aaKnown RBP13.83□□□□□ -0.2
SIN3A-205ENST00000564778 ZNF316A6NFI3 1004 aaPredicted RBP13.83□□□□□ -0.2
SIN3A-205ENST00000564778 ROBO2Q9HCK4 1378 aa13.83□□□□□ -0.2
SIN3A-205ENST00000564778 ADGRB2O60241 1585 aa13.82□□□□□ -0.2
SIN3A-205ENST00000564778 STK26Q9P289 416 aa13.81□□□□□ -0.2
SIN3A-205ENST00000564778 SLC24A1O60721 1099 aa13.8□□□□□ -0.2
SIN3A-205ENST00000564778 AMOTL2Q9Y2J4 779 aa13.8□□□□□ -0.2
SIN3A-205ENST00000564778 PLEKHH1Q9ULM0 1364 aa13.8□□□□□ -0.2
SIN3A-205ENST00000564778 KCNA6P17658 529 aa13.79□□□□□ -0.2
SIN3A-205ENST00000564778 PRAM1Q96QH2 718 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms