RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 HDGFP51858 240 aaKnown RBP14.78□□□□□ -0.04
CDH1-206ENST00000564676 ILDR1Q86SU0 546 aaPredicted RBP14.76□□□□□ -0.05
CDH1-206ENST00000564676 BCANQ96GW7 911 aa14.76□□□□□ -0.05
CDH1-206ENST00000564676 MPHOSPH9Q99550 1183 aa14.76□□□□□ -0.05
CDH1-206ENST00000564676 SPHKAPQ2M3C7 1700 aa14.75□□□□□ -0.05
CDH1-206ENST00000564676 RAB3GAP2Q9H2M9 1393 aa14.75□□□□□ -0.05
CDH1-206ENST00000564676 IQGAP1P46940 1657 aa14.75□□□□□ -0.05
CDH1-206ENST00000564676 DCAF8L1A6NGE4 600 aa14.75□□□□□ -0.05
CDH1-206ENST00000564676 PPP1R15AO75807 674 aaPredicted RBP14.75□□□□□ -0.05
CDH1-206ENST00000564676 MYO5BQ9ULV0 1848 aa14.74□□□□□ -0.05
CDH1-206ENST00000564676 FBXO41Q8TF61 875 aa14.74□□□□□ -0.05
CDH1-206ENST00000564676 RIMS2Q9UQ26 1411 aa14.74□□□□□ -0.05
CDH1-206ENST00000564676 TMEM131LA2VDJ0 1609 aa14.74□□□□□ -0.05
CDH1-206ENST00000564676 LTBP4Q8N2S1 1624 aa14.74□□□□□ -0.05
CDH1-206ENST00000564676 ZNF326Q5BKZ1 582 aaKnown RBP14.73□□□□□ -0.05
CDH1-206ENST00000564676 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.73□□□□□ -0.05
CDH1-206ENST00000564676 NUTM2DQ5VT03 806 aaPredicted RBP14.72□□□□□ -0.05
CDH1-206ENST00000564676 RNF216Q9NWF9 866 aaPredicted RBP14.71□□□□□ -0.05
CDH1-206ENST00000564676 TRPM2O94759 1503 aa14.71□□□□□ -0.06
CDH1-206ENST00000564676 ZFYVE9O95405 1425 aa14.7□□□□□ -0.06
CDH1-206ENST00000564676 SLC26A8Q96RN1 970 aa14.7□□□□□ -0.06
CDH1-206ENST00000564676 CLTCL1P53675 1640 aa14.69□□□□□ -0.06
CDH1-206ENST00000564676 HRCP23327 699 aa14.68□□□□□ -0.06
CDH1-206ENST00000564676 PLEKHG1Q9ULL1 1385 aa14.67□□□□□ -0.06
CDH1-206ENST00000564676 CPS1P31327 1500 aa14.66□□□□□ -0.06
CDH1-206ENST00000564676 KIF1BO60333 1816 aa14.66□□□□□ -0.06
CDH1-206ENST00000564676 CACNB1Q02641 598 aaPredicted RBP14.66□□□□□ -0.06
CDH1-206ENST00000564676 IQSEC2Q5JU85 1478 aa14.65□□□□□ -0.06
CDH1-206ENST00000564676 CCDC144AA2RUR9 1427 aa14.65□□□□□ -0.06
CDH1-206ENST00000564676 KCNA6P17658 529 aa14.64□□□□□ -0.07
CDH1-206ENST00000564676 TBX22Q9Y458 520 aa14.64□□□□□ -0.07
CDH1-206ENST00000564676 UBAP1LF5GYI3 381 aa14.63□□□□□ -0.07
CDH1-206ENST00000564676 RGL3Q3MIN7 710 aa14.62□□□□□ -0.07
CDH1-206ENST00000564676 STRCP1A6NGW2 1772 aa14.62□□□□□ -0.07
CDH1-206ENST00000564676 RPGRIP1LQ68CZ1 1315 aa14.62□□□□□ -0.07
CDH1-206ENST00000564676 VGFO15240 615 aaPredicted RBP14.61□□□□□ -0.07
CDH1-206ENST00000564676 PROSER2Q86WR7 435 aaPredicted RBP14.6□□□□□ -0.07
CDH1-206ENST00000564676 ADAMTS13Q76LX8 1427 aa14.59□□□□□ -0.07
CDH1-206ENST00000564676 TOM1O60784 492 aa14.59□□□□□ -0.07
CDH1-206ENST00000564676 NEXMIFQ5QGS0 1516 aa14.59□□□□□ -0.07
CDH1-206ENST00000564676 LRRC7Q96NW7 1537 aa14.59□□□□□ -0.07
CDH1-206ENST00000564676 TRIM26Q12899 539 aaPredicted RBP14.58□□□□□ -0.08
CDH1-206ENST00000564676 RBM33Q96EV2 1170 aaKnown RBP14.56□□□□□ -0.08
CDH1-206ENST00000564676 PIK3R4Q99570 1358 aa14.56□□□□□ -0.08
CDH1-206ENST00000564676 ANKRD30BQ9BXX2 1392 aa14.56□□□□□ -0.08
CDH1-206ENST00000564676 SPATA31E1Q6ZUB1 1445 aa14.56□□□□□ -0.08
CDH1-206ENST00000564676 DIP2AQ14689 1571 aa14.56□□□□□ -0.08
CDH1-206ENST00000564676 PIP4K2BP78356 416 aa14.55□□□□□ -0.08
CDH1-206ENST00000564676 AMOTL2Q9Y2J4 779 aa14.55□□□□□ -0.08
CDH1-206ENST00000564676 TMEM94Q12767 1356 aa14.55□□□□□ -0.08
CDH1-206ENST00000564676 CHD2O14647 1828 aaKnown RBP14.55□□□□□ -0.08
CDH1-206ENST00000564676 SETBP1Q9Y6X0 1596 aa14.54□□□□□ -0.08
CDH1-206ENST00000564676 NWD1Q149M9 1564 aa14.53□□□□□ -0.08
CDH1-206ENST00000564676 NKTRP30414 1462 aaKnown RBP14.53□□□□□ -0.08
CDH1-206ENST00000564676 PPLO60437 1756 aa14.52□□□□□ -0.08
CDH1-206ENST00000564676 NRXN3Q9Y4C0 1643 aa14.52□□□□□ -0.08
CDH1-206ENST00000564676 METP08581 1390 aa14.52□□□□□ -0.08
CDH1-206ENST00000564676 ADGRF5Q8IZF2 1346 aa14.52□□□□□ -0.08
CDH1-206ENST00000564676 C14orf37Q86TY3 774 aa14.52□□□□□ -0.09
CDH1-206ENST00000564676 RNF39Q9H2S5 420 aa14.51□□□□□ -0.09
CDH1-206ENST00000564676 PTPRUQ92729 1446 aa14.5□□□□□ -0.09
CDH1-206ENST00000564676 NCBP3Q53F19 620 aaKnown RBP14.5□□□□□ -0.09
CDH1-206ENST00000564676 XIRP1Q702N8 1843 aaKnown RBP14.49□□□□□ -0.09
CDH1-206ENST00000564676 MSH6P52701 1360 aa14.48□□□□□ -0.09
CDH1-206ENST00000564676 ALKQ9UM73 1620 aa14.48□□□□□ -0.09
CDH1-206ENST00000564676 KDM2AQ9Y2K7 1162 aa14.47□□□□□ -0.09
CDH1-206ENST00000564676 NCOA3Q9Y6Q9 1424 aa14.46□□□□□ -0.09
CDH1-206ENST00000564676 IFT172Q9UG01 1749 aa14.46□□□□□ -0.1
CDH1-206ENST00000564676 DCAF11Q8TEB1 546 aa14.45□□□□□ -0.1
CDH1-206ENST00000564676 C19orf44Q9H6X5 657 aa14.45□□□□□ -0.1
CDH1-206ENST00000564676 ATF3P18847 181 aa14.44□□□□□ -0.1
CDH1-206ENST00000564676 XRN1Q8IZH2 1706 aaKnown RBP14.44□□□□□ -0.1
CDH1-206ENST00000564676 PIK3C2GO75747 1445 aa14.43□□□□□ -0.1
CDH1-206ENST00000564676 HSPA1LP34931 641 aa14.43□□□□□ -0.1
CDH1-206ENST00000564676 CFAP70Q5T0N1 1121 aa14.43□□□□□ -0.1
CDH1-206ENST00000564676 TMEM132EQ6IEE7 984 aa14.43□□□□□ -0.1
CDH1-206ENST00000564676 C14orf93Q9H972 538 aaKnown RBP14.43□□□□□ -0.1
CDH1-206ENST00000564676 STK26Q9P289 416 aa14.43□□□□□ -0.1
CDH1-206ENST00000564676 SETD1AO15047 1707 aaKnown RBP14.42□□□□□ -0.1
CDH1-206ENST00000564676 CADPS2Q86UW7 1296 aa14.42□□□□□ -0.1
CDH1-206ENST00000564676 STAC3Q96MF2 364 aa14.42□□□□□ -0.1
CDH1-206ENST00000564676 SLAIN2Q9P270 581 aa14.42□□□□□ -0.1
CDH1-206ENST00000564676 MYOM2P54296 1465 aa14.42□□□□□ -0.1
CDH1-206ENST00000564676 DHX57Q6P158 1386 aaKnown RBP14.4□□□□□ -0.1
CDH1-206ENST00000564676 ROBO2Q9HCK4 1378 aa14.4□□□□□ -0.1
CDH1-206ENST00000564676 NPM3O75607 178 aaKnown RBP14.4□□□□□ -0.1
CDH1-206ENST00000564676 NEUROD1Q13562 356 aa14.4□□□□□ -0.1
CDH1-206ENST00000564676 SIN3AQ96ST3 1273 aa14.4□□□□□ -0.1
CDH1-206ENST00000564676 NRXN1Q9ULB1 1477 aa14.39□□□□□ -0.11
CDH1-206ENST00000564676 LRPPRCP42704 1394 aaKnown RBP14.39□□□□□ -0.11
CDH1-206ENST00000564676 PTCH1Q13635 1447 aa14.39□□□□□ -0.11
CDH1-206ENST00000564676 FAM135BQ49AJ0 1406 aa14.39□□□□□ -0.11
CDH1-206ENST00000564676 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.38□□□□□ -0.11
CDH1-206ENST00000564676 ABCC11Q96J66 1382 aa14.37□□□□□ -0.11
CDH1-206ENST00000564676 YTHDC2Q9H6S0 1430 aaKnown RBP14.36□□□□□ -0.11
CDH1-206ENST00000564676 ADGRL3Q9HAR2 1447 aa14.36□□□□□ -0.11
CDH1-206ENST00000564676 C1QBPQ07021 282 aaKnown RBP14.36□□□□□ -0.11
CDH1-206ENST00000564676 WAPLQ7Z5K2 1190 aa14.36□□□□□ -0.11
CDH1-206ENST00000564676 PCGF6Q9BYE7 350 aa14.36□□□□□ -0.11
CDH1-206ENST00000564676 ASXL1Q8IXJ9 1541 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms