RNA–Protein interactions for RNA: ENST00000564584.1

CTU2-205, Transcript of cytosolic thiouridylase subunit 2, humanhuman

TSL 3

Gene CTU2, Length 896 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTU2-205ENST00000564584 TET3O43151 1660 aa21■□□□□ 0.95
CTU2-205ENST00000564584 ITGAEP38570 1179 aa21■□□□□ 0.95
CTU2-205ENST00000564584 RBM33Q96EV2 1170 aaKnown RBP21■□□□□ 0.95
CTU2-205ENST00000564584 PPP1R15AO75807 674 aaPredicted RBP20.99■□□□□ 0.95
CTU2-205ENST00000564584 RGS17Q9UGC6 210 aaPredicted RBP20.99■□□□□ 0.95
CTU2-205ENST00000564584 FAM135BQ49AJ0 1406 aa20.98■□□□□ 0.95
CTU2-205ENST00000564584 CHGAP10645 457 aaKnown RBP20.98■□□□□ 0.95
CTU2-205ENST00000564584 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.96■□□□□ 0.95
CTU2-205ENST00000564584 PLEKHG1Q9ULL1 1385 aa20.96■□□□□ 0.95
CTU2-205ENST00000564584 ZFYVE9O95405 1425 aa20.95■□□□□ 0.95
CTU2-205ENST00000564584 RIMS2Q9UQ26 1411 aa20.95■□□□□ 0.95
CTU2-205ENST00000564584 TRIM26Q12899 539 aaPredicted RBP20.95■□□□□ 0.94
CTU2-205ENST00000564584 SETD1AO15047 1707 aaKnown RBP20.95■□□□□ 0.94
CTU2-205ENST00000564584 TBX22Q9Y458 520 aa20.94■□□□□ 0.94
CTU2-205ENST00000564584 NUP155O75694 1391 aa20.93■□□□□ 0.94
CTU2-205ENST00000564584 NKTRP30414 1462 aaKnown RBP20.91■□□□□ 0.94
CTU2-205ENST00000564584 MSH6P52701 1360 aa20.9■□□□□ 0.94
CTU2-205ENST00000564584 NUTM2DQ5VT03 806 aaPredicted RBP20.9■□□□□ 0.94
CTU2-205ENST00000564584 SLAIN2Q9P270 581 aa20.9■□□□□ 0.94
CTU2-205ENST00000564584 UNC13BO14795 1591 aa20.89■□□□□ 0.93
CTU2-205ENST00000564584 XIRP1Q702N8 1843 aaKnown RBP20.88■□□□□ 0.93
CTU2-205ENST00000564584 TMEM131LA2VDJ0 1609 aa20.86■□□□□ 0.93
CTU2-205ENST00000564584 NWD1Q149M9 1564 aa20.86■□□□□ 0.93
CTU2-205ENST00000564584 HFM1A2PYH4 1435 aa20.86■□□□□ 0.93
CTU2-205ENST00000564584 ACIN1Q9UKV3 1341 aaKnown RBP20.85■□□□□ 0.93
CTU2-205ENST00000564584 POTEAQ6S8J7 498 aa20.84■□□□□ 0.93
CTU2-205ENST00000564584 C14orf37Q86TY3 774 aa20.83■□□□□ 0.93
CTU2-205ENST00000564584 ADAMTS13Q76LX8 1427 aa20.82■□□□□ 0.92
CTU2-205ENST00000564584 NCOA3Q9Y6Q9 1424 aa20.82■□□□□ 0.92
CTU2-205ENST00000564584 GCC2Q8IWJ2 1684 aa20.82■□□□□ 0.92
CTU2-205ENST00000564584 NAIPQ13075 1403 aa20.81■□□□□ 0.92
CTU2-205ENST00000564584 IQGAP3Q86VI3 1631 aa20.81■□□□□ 0.92
CTU2-205ENST00000564584 PIK3R4Q99570 1358 aa20.81■□□□□ 0.92
CTU2-205ENST00000564584 E9PCH4 1651 aa20.8■□□□□ 0.92
CTU2-205ENST00000564584 C19orf44Q9H6X5 657 aa20.8■□□□□ 0.92
CTU2-205ENST00000564584 AMOTL2Q9Y2J4 779 aa20.8■□□□□ 0.92
CTU2-205ENST00000564584 CADPS2Q86UW7 1296 aa20.78■□□□□ 0.92
CTU2-205ENST00000564584 ROBO1Q9Y6N7 1651 aa20.77■□□□□ 0.92
CTU2-205ENST00000564584 ATF3P18847 181 aa20.77■□□□□ 0.92
CTU2-205ENST00000564584 ZNF326Q5BKZ1 582 aaKnown RBP20.77■□□□□ 0.92
CTU2-205ENST00000564584 SETD5Q9C0A6 1442 aa20.77■□□□□ 0.91
CTU2-205ENST00000564584 JCADQ9P266 1359 aa20.74■□□□□ 0.91
CTU2-205ENST00000564584 CHD2O14647 1828 aaKnown RBP20.74■□□□□ 0.91
CTU2-205ENST00000564584 MYO5BQ9ULV0 1848 aa20.74■□□□□ 0.91
CTU2-205ENST00000564584 HRCP23327 699 aa20.73■□□□□ 0.91
CTU2-205ENST00000564584 DIP2AQ14689 1571 aa20.72■□□□□ 0.91
CTU2-205ENST00000564584 PTPRUQ92729 1446 aa20.72■□□□□ 0.91
CTU2-205ENST00000564584 TRPM2O94759 1503 aa20.69■□□□□ 0.9
CTU2-205ENST00000564584 TRIM52Q96A61 297 aa20.67■□□□□ 0.9
CTU2-205ENST00000564584 BRINP3Q76B58 766 aa20.66■□□□□ 0.9
CTU2-205ENST00000564584 SPATA31A6Q5VVP1 1343 aa20.66■□□□□ 0.9
CTU2-205ENST00000564584 METP08581 1390 aa20.66■□□□□ 0.9
CTU2-205ENST00000564584 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
CTU2-205ENST00000564584 PCGF6Q9BYE7 350 aa20.64■□□□□ 0.89
CTU2-205ENST00000564584 PHLPP1O60346 1717 aa20.63■□□□□ 0.89
CTU2-205ENST00000564584 SETBP1Q9Y6X0 1596 aa20.63■□□□□ 0.89
CTU2-205ENST00000564584 MEX3CQ5U5Q3 659 aaKnown RBP20.62■□□□□ 0.89
CTU2-205ENST00000564584 DCCP43146 1447 aa20.61■□□□□ 0.89
CTU2-205ENST00000564584 VGFO15240 615 aaPredicted RBP20.61■□□□□ 0.89
CTU2-205ENST00000564584 SLC4A1APQ9BWU0 796 aaKnown RBP20.61■□□□□ 0.89
CTU2-205ENST00000564584 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.61■□□□□ 0.89
CTU2-205ENST00000564584 COL16A1Q07092 1604 aaPredicted RBP20.6■□□□□ 0.89
CTU2-205ENST00000564584 SPHKAPQ2M3C7 1700 aa20.59■□□□□ 0.89
CTU2-205ENST00000564584 UPF1Q92900 1129 aaKnown RBP eCLIP20.59■□□□□ 0.89
CTU2-205ENST00000564584 NRXN3Q9Y4C0 1643 aa20.58■□□□□ 0.89
CTU2-205ENST00000564584 RPGRIP1LQ68CZ1 1315 aa20.57■□□□□ 0.88
CTU2-205ENST00000564584 AHDC1Q5TGY3 1603 aaPredicted RBP20.57■□□□□ 0.88
CTU2-205ENST00000564584 ZNF772Q68DY9 489 aaPredicted RBP20.57■□□□□ 0.88
CTU2-205ENST00000564584 CLTCL1P53675 1640 aa20.56■□□□□ 0.88
CTU2-205ENST00000564584 MST1RQ04912 1400 aa20.56■□□□□ 0.88
CTU2-205ENST00000564584 NEXMIFQ5QGS0 1516 aa20.56■□□□□ 0.88
CTU2-205ENST00000564584 NUTM2BA6NNL0 878 aaPredicted RBP20.55■□□□□ 0.88
CTU2-205ENST00000564584 NUTM2EB1AL46 878 aaPredicted RBP20.55■□□□□ 0.88
CTU2-205ENST00000564584 NUTM2AQ8IVF1 878 aaPredicted RBP20.55■□□□□ 0.88
CTU2-205ENST00000564584 LRRC59Q96AG4 307 aaKnown RBP20.55■□□□□ 0.88
CTU2-205ENST00000564584 LRP6O75581 1613 aa20.55■□□□□ 0.88
CTU2-205ENST00000564584 XRN1Q8IZH2 1706 aaKnown RBP20.54■□□□□ 0.88
CTU2-205ENST00000564584 ADGRL3Q9HAR2 1447 aa20.53■□□□□ 0.88
CTU2-205ENST00000564584 ASXL1Q8IXJ9 1541 aa20.52■□□□□ 0.87
CTU2-205ENST00000564584 DDX17Q92841 729 aaKnown RBP20.51■□□□□ 0.87
CTU2-205ENST00000564584 FOXD1Q16676 465 aa20.5■□□□□ 0.87
CTU2-205ENST00000564584 MPHOSPH9Q99550 1183 aa20.5■□□□□ 0.87
CTU2-205ENST00000564584 ROBO2Q9HCK4 1378 aa20.49■□□□□ 0.87
CTU2-205ENST00000564584 RXRBP28702 533 aa20.47■□□□□ 0.87
CTU2-205ENST00000564584 PTCH1Q13635 1447 aa20.46■□□□□ 0.87
CTU2-205ENST00000564584 C1orf167Q5SNV9 1468 aa20.46■□□□□ 0.87
CTU2-205ENST00000564584 ORAI2Q96SN7 254 aa20.45■□□□□ 0.86
CTU2-205ENST00000564584 SHPRHQ149N8 1683 aa20.45■□□□□ 0.86
CTU2-205ENST00000564584 RGL3Q3MIN7 710 aa20.44■□□□□ 0.86
CTU2-205ENST00000564584 AFF2P51816 1311 aa20.44■□□□□ 0.86
CTU2-205ENST00000564584 SRCAPQ6ZRS2 3230 aa20.44■□□□□ 0.86
CTU2-205ENST00000564584 KIF1BO60333 1816 aa20.43■□□□□ 0.86
CTU2-205ENST00000564584 PNPLA6Q8IY17 1366 aa20.43■□□□□ 0.86
CTU2-205ENST00000564584 ADGRF5Q8IZF2 1346 aa20.42■□□□□ 0.86
CTU2-205ENST00000564584 PRAG1Q86YV5 1406 aa20.42■□□□□ 0.86
CTU2-205ENST00000564584 C8orf37Q96NL8 207 aa20.41■□□□□ 0.86
CTU2-205ENST00000564584 CCDC144AA2RUR9 1427 aa20.41■□□□□ 0.86
CTU2-205ENST00000564584 SOS2Q07890 1332 aaPredicted RBP20.4■□□□□ 0.86
CTU2-205ENST00000564584 QTRT2Q9H974 415 aaKnown RBP20.38■□□□□ 0.85
CTU2-205ENST00000564584 STK26Q9P289 416 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms