RNA–Protein interactions for RNA: ENST00000564519.1

HERC2-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 3

Gene HERC2, Length 323 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-206ENST00000564519 HFM1A2PYH4 1435 aa19.17■□□□□ 0.66
HERC2-206ENST00000564519 CHGAP10645 457 aaKnown RBP19.16■□□□□ 0.66
HERC2-206ENST00000564519 ZFYVE9O95405 1425 aa19.15■□□□□ 0.66
HERC2-206ENST00000564519 TMEM131LA2VDJ0 1609 aa19.14■□□□□ 0.66
HERC2-206ENST00000564519 STRCP1A6NGW2 1772 aa19.14■□□□□ 0.66
HERC2-206ENST00000564519 SLC26A8Q96RN1 970 aa19.13■□□□□ 0.65
HERC2-206ENST00000564519 RIMS2Q9UQ26 1411 aa19.13■□□□□ 0.65
HERC2-206ENST00000564519 BCANQ96GW7 911 aa19.12■□□□□ 0.65
HERC2-206ENST00000564519 NUTM2DQ5VT03 806 aaPredicted RBP19.11■□□□□ 0.65
HERC2-206ENST00000564519 TRIM52Q96A61 297 aa19.11■□□□□ 0.65
HERC2-206ENST00000564519 ALKQ9UM73 1620 aa19.08■□□□□ 0.65
HERC2-206ENST00000564519 PPP1R15AO75807 674 aaPredicted RBP19.08■□□□□ 0.64
HERC2-206ENST00000564519 MYO5BQ9ULV0 1848 aa19.08■□□□□ 0.64
HERC2-206ENST00000564519 PLEKHG1Q9ULL1 1385 aa19.07■□□□□ 0.64
HERC2-206ENST00000564519 PROSER2Q86WR7 435 aaPredicted RBP19.06■□□□□ 0.64
HERC2-206ENST00000564519 KCNA6P17658 529 aa19.05■□□□□ 0.64
HERC2-206ENST00000564519 HDGFP51858 240 aaKnown RBP19.05■□□□□ 0.64
HERC2-206ENST00000564519 SPHKAPQ2M3C7 1700 aa19.05■□□□□ 0.64
HERC2-206ENST00000564519 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.04■□□□□ 0.64
HERC2-206ENST00000564519 SLC4A1APQ9BWU0 796 aaKnown RBP19.04■□□□□ 0.64
HERC2-206ENST00000564519 TMEM94Q12767 1356 aa19.04■□□□□ 0.64
HERC2-206ENST00000564519 TRPM2O94759 1503 aa19.03■□□□□ 0.64
HERC2-206ENST00000564519 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
HERC2-206ENST00000564519 CLTCL1P53675 1640 aa19.02■□□□□ 0.64
HERC2-206ENST00000564519 ADAMTS13Q76LX8 1427 aa19.01■□□□□ 0.63
HERC2-206ENST00000564519 FOXD1Q16676 465 aa19.01■□□□□ 0.63
HERC2-206ENST00000564519 FAM135BQ49AJ0 1406 aa19■□□□□ 0.63
HERC2-206ENST00000564519 ZNF326Q5BKZ1 582 aaKnown RBP19■□□□□ 0.63
HERC2-206ENST00000564519 TBX22Q9Y458 520 aa19■□□□□ 0.63
HERC2-206ENST00000564519 NWD1Q149M9 1564 aa18.98■□□□□ 0.63
HERC2-206ENST00000564519 MSH6P52701 1360 aa18.97■□□□□ 0.63
HERC2-206ENST00000564519 MPHOSPH9Q99550 1183 aa18.96■□□□□ 0.63
HERC2-206ENST00000564519 NKTRP30414 1462 aaKnown RBP18.96■□□□□ 0.63
HERC2-206ENST00000564519 XIRP1Q702N8 1843 aaKnown RBP18.95■□□□□ 0.62
HERC2-206ENST00000564519 SETD5Q9C0A6 1442 aa18.95■□□□□ 0.62
HERC2-206ENST00000564519 NEXMIFQ5QGS0 1516 aa18.94■□□□□ 0.62
HERC2-206ENST00000564519 C14orf37Q86TY3 774 aa18.93■□□□□ 0.62
HERC2-206ENST00000564519 DIP2AQ14689 1571 aa18.92■□□□□ 0.62
HERC2-206ENST00000564519 NRXN3Q9Y4C0 1643 aa18.92■□□□□ 0.62
HERC2-206ENST00000564519 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
HERC2-206ENST00000564519 SLAIN2Q9P270 581 aa18.91■□□□□ 0.62
HERC2-206ENST00000564519 RGS17Q9UGC6 210 aaPredicted RBP18.91■□□□□ 0.62
HERC2-206ENST00000564519 RAB3GAP2Q9H2M9 1393 aa18.91■□□□□ 0.62
HERC2-206ENST00000564519 SETBP1Q9Y6X0 1596 aa18.9■□□□□ 0.62
HERC2-206ENST00000564519 CHD2O14647 1828 aaKnown RBP18.9■□□□□ 0.62
HERC2-206ENST00000564519 PIK3R4Q99570 1358 aa18.9■□□□□ 0.62
HERC2-206ENST00000564519 AMOTL2Q9Y2J4 779 aa18.89■□□□□ 0.61
HERC2-206ENST00000564519 METP08581 1390 aa18.88■□□□□ 0.61
HERC2-206ENST00000564519 ROBO1Q9Y6N7 1651 aa18.87■□□□□ 0.61
HERC2-206ENST00000564519 KIF1BO60333 1816 aa18.86■□□□□ 0.61
HERC2-206ENST00000564519 CCDC144AA2RUR9 1427 aa18.85■□□□□ 0.61
HERC2-206ENST00000564519 JCADQ9P266 1359 aa18.84■□□□□ 0.61
HERC2-206ENST00000564519 RPGRIP1LQ68CZ1 1315 aa18.84■□□□□ 0.61
HERC2-206ENST00000564519 ATF3P18847 181 aa18.84■□□□□ 0.61
HERC2-206ENST00000564519 POTEAQ6S8J7 498 aa18.84■□□□□ 0.61
HERC2-206ENST00000564519 VGFO15240 615 aaPredicted RBP18.83■□□□□ 0.6
HERC2-206ENST00000564519 SPATA31E1Q6ZUB1 1445 aa18.83■□□□□ 0.6
HERC2-206ENST00000564519 RGL3Q3MIN7 710 aa18.82■□□□□ 0.6
HERC2-206ENST00000564519 MEX3CQ5U5Q3 659 aaKnown RBP18.82■□□□□ 0.6
HERC2-206ENST00000564519 CADPS2Q86UW7 1296 aa18.82■□□□□ 0.6
HERC2-206ENST00000564519 NCOA3Q9Y6Q9 1424 aa18.82■□□□□ 0.6
HERC2-206ENST00000564519 ACIN1Q9UKV3 1341 aaKnown RBP18.81■□□□□ 0.6
HERC2-206ENST00000564519 XRN1Q8IZH2 1706 aaKnown RBP18.8■□□□□ 0.6
HERC2-206ENST00000564519 ADGRF5Q8IZF2 1346 aa18.79■□□□□ 0.6
HERC2-206ENST00000564519 C19orf44Q9H6X5 657 aa18.79■□□□□ 0.6
HERC2-206ENST00000564519 PHLPP1O60346 1717 aa18.77■□□□□ 0.59
HERC2-206ENST00000564519 PPLO60437 1756 aa18.76■□□□□ 0.59
HERC2-206ENST00000564519 SPATA31A6Q5VVP1 1343 aa18.75■□□□□ 0.59
HERC2-206ENST00000564519 SETD1AO15047 1707 aaKnown RBP18.75■□□□□ 0.59
HERC2-206ENST00000564519 ZNF772Q68DY9 489 aaPredicted RBP18.74■□□□□ 0.59
HERC2-206ENST00000564519 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.74■□□□□ 0.59
HERC2-206ENST00000564519 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
HERC2-206ENST00000564519 HRCP23327 699 aa18.73■□□□□ 0.59
HERC2-206ENST00000564519 ANKRD30BQ9BXX2 1392 aa18.72■□□□□ 0.59
HERC2-206ENST00000564519 PTCH1Q13635 1447 aa18.7■□□□□ 0.58
HERC2-206ENST00000564519 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
HERC2-206ENST00000564519 ADGRL3Q9HAR2 1447 aa18.69■□□□□ 0.58
HERC2-206ENST00000564519 PIK3C2GO75747 1445 aa18.68■□□□□ 0.58
HERC2-206ENST00000564519 DCCP43146 1447 aa18.68■□□□□ 0.58
HERC2-206ENST00000564519 NUTM2BA6NNL0 878 aaPredicted RBP18.68■□□□□ 0.58
HERC2-206ENST00000564519 NUTM2EB1AL46 878 aaPredicted RBP18.68■□□□□ 0.58
HERC2-206ENST00000564519 NUTM2AQ8IVF1 878 aaPredicted RBP18.68■□□□□ 0.58
HERC2-206ENST00000564519 MST1RQ04912 1400 aa18.67■□□□□ 0.58
HERC2-206ENST00000564519 PRAG1Q86YV5 1406 aa18.67■□□□□ 0.58
HERC2-206ENST00000564519 TMEM132EQ6IEE7 984 aa18.67■□□□□ 0.58
HERC2-206ENST00000564519 BRINP3Q76B58 766 aa18.67■□□□□ 0.58
HERC2-206ENST00000564519 ASXL1Q8IXJ9 1541 aa18.67■□□□□ 0.58
HERC2-206ENST00000564519 COL16A1Q07092 1604 aaPredicted RBP18.67■□□□□ 0.58
HERC2-206ENST00000564519 STK26Q9P289 416 aa18.65■□□□□ 0.58
HERC2-206ENST00000564519 NALCNQ8IZF0 1738 aa18.65■□□□□ 0.58
HERC2-206ENST00000564519 AHDC1Q5TGY3 1603 aaPredicted RBP18.64■□□□□ 0.57
HERC2-206ENST00000564519 RXRBP28702 533 aa18.64■□□□□ 0.57
HERC2-206ENST00000564519 NRXN1Q9ULB1 1477 aa18.64■□□□□ 0.57
HERC2-206ENST00000564519 CFAP70Q5T0N1 1121 aa18.63■□□□□ 0.57
HERC2-206ENST00000564519 C14orf93Q9H972 538 aaKnown RBP18.63■□□□□ 0.57
HERC2-206ENST00000564519 LRPPRCP42704 1394 aaKnown RBP18.63■□□□□ 0.57
HERC2-206ENST00000564519 MYOM2P54296 1465 aa18.63■□□□□ 0.57
HERC2-206ENST00000564519 LRP6O75581 1613 aa18.63■□□□□ 0.57
HERC2-206ENST00000564519 WAPLQ7Z5K2 1190 aa18.62■□□□□ 0.57
HERC2-206ENST00000564519 PLEKHH1Q9ULM0 1364 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms