RNA–Protein interactions for RNA: ENST00000564512.1

VAC14-205, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-205ENST00000564512 KIAA1210Q9ULL0 1709 aa26.65■■□□□ 1.86
VAC14-205ENST00000564512 RIMS2Q9UQ26 1411 aa26.65■■□□□ 1.86
VAC14-205ENST00000564512 LAMC1P11047 1609 aa26.64■■□□□ 1.85
VAC14-205ENST00000564512 SETD1AO15047 1707 aaKnown RBP26.62■■□□□ 1.85
VAC14-205ENST00000564512 NRXN3Q9Y4C0 1643 aa26.62■■□□□ 1.85
VAC14-205ENST00000564512 CHGAP10645 457 aaKnown RBP26.62■■□□□ 1.85
VAC14-205ENST00000564512 STAG3Q9UJ98 1225 aa26.62■■□□□ 1.85
VAC14-205ENST00000564512 IQGAP1P46940 1657 aa26.62■■□□□ 1.85
VAC14-205ENST00000564512 L3MBTL2Q969R5 705 aa26.61■■□□□ 1.85
VAC14-205ENST00000564512 TRPM1Q7Z4N2 1603 aa26.61■■□□□ 1.85
VAC14-205ENST00000564512 THEMISQ8N1K5 641 aaPredicted RBP26.6■■□□□ 1.85
VAC14-205ENST00000564512 SETBP1Q9Y6X0 1596 aa26.59■■□□□ 1.85
VAC14-205ENST00000564512 RGL3Q3MIN7 710 aa26.59■■□□□ 1.85
VAC14-205ENST00000564512 STAC3Q96MF2 364 aa26.59■■□□□ 1.85
VAC14-205ENST00000564512 SCAF11Q99590 1463 aaKnown RBP26.59■■□□□ 1.85
VAC14-205ENST00000564512 STRCQ7RTU9 1775 aa26.58■■□□□ 1.85
VAC14-205ENST00000564512 PIK3C2GO75747 1445 aa26.56■■□□□ 1.84
VAC14-205ENST00000564512 PRAG1Q86YV5 1406 aa26.56■■□□□ 1.84
VAC14-205ENST00000564512 ZNF326Q5BKZ1 582 aaKnown RBP26.56■■□□□ 1.84
VAC14-205ENST00000564512 MED14O60244 1454 aa26.54■■□□□ 1.84
VAC14-205ENST00000564512 DIP2AQ14689 1571 aa26.53■■□□□ 1.84
VAC14-205ENST00000564512 DCAF11Q8TEB1 546 aa26.52■■□□□ 1.84
VAC14-205ENST00000564512 PLEKHG1Q9ULL1 1385 aa26.51■■□□□ 1.83
VAC14-205ENST00000564512 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.51■■□□□ 1.83
VAC14-205ENST00000564512 ZEB1P37275 1124 aaPredicted RBP26.49■■□□□ 1.83
VAC14-205ENST00000564512 RALGAPBQ86X10 1494 aa26.49■■□□□ 1.83
VAC14-205ENST00000564512 ADGRF5Q8IZF2 1346 aa26.48■■□□□ 1.83
VAC14-205ENST00000564512 VGFO15240 615 aaPredicted RBP26.48■■□□□ 1.83
VAC14-205ENST00000564512 ALKQ9UM73 1620 aa26.47■■□□□ 1.83
VAC14-205ENST00000564512 PPP1R15AO75807 674 aaPredicted RBP26.47■■□□□ 1.83
VAC14-205ENST00000564512 HDGFP51858 240 aaKnown RBP26.47■■□□□ 1.83
VAC14-205ENST00000564512 LTKP29376 864 aa26.46■■□□□ 1.83
VAC14-205ENST00000564512 ASXL1Q8IXJ9 1541 aa26.45■■□□□ 1.83
VAC14-205ENST00000564512 EID1Q9Y6B2 187 aa26.44■■□□□ 1.82
VAC14-205ENST00000564512 ADAMTS13Q76LX8 1427 aa26.44■■□□□ 1.82
VAC14-205ENST00000564512 ADGRB1O14514 1584 aa26.43■■□□□ 1.82
VAC14-205ENST00000564512 TXNDC2Q86VQ3 553 aa26.43■■□□□ 1.82
VAC14-205ENST00000564512 KDM2AQ9Y2K7 1162 aa26.42■■□□□ 1.82
VAC14-205ENST00000564512 KNDC1Q76NI1 1749 aa26.42■■□□□ 1.82
VAC14-205ENST00000564512 NPHP4O75161 1426 aaPredicted RBP26.41■■□□□ 1.82
VAC14-205ENST00000564512 ANKLE2Q86XL3 938 aa26.41■■□□□ 1.82
VAC14-205ENST00000564512 HSPA2P54652 639 aa26.4■■□□□ 1.82
VAC14-205ENST00000564512 NBPF8Q3BBV2 869 aa26.4■■□□□ 1.82
VAC14-205ENST00000564512 NUTM2DQ5VT03 806 aaPredicted RBP26.4■■□□□ 1.82
VAC14-205ENST00000564512 CHD2O14647 1828 aaKnown RBP26.37■■□□□ 1.81
VAC14-205ENST00000564512 GPRASP1Q5JY77 1395 aa26.37■■□□□ 1.81
VAC14-205ENST00000564512 XRN1Q8IZH2 1706 aaKnown RBP26.36■■□□□ 1.81
VAC14-205ENST00000564512 ARHGEF28Q8N1W1 1705 aaKnown RBP26.34■■□□□ 1.81
VAC14-205ENST00000564512 NWD1Q149M9 1564 aa26.34■■□□□ 1.81
VAC14-205ENST00000564512 C14orf93Q9H972 538 aaKnown RBP26.34■■□□□ 1.81
VAC14-205ENST00000564512 NCKAP5LQ9HCH0 1330 aa26.33■■□□□ 1.81
VAC14-205ENST00000564512 CFAP70Q5T0N1 1121 aa26.29■■□□□ 1.8
VAC14-205ENST00000564512 AEBP2Q6ZN18 517 aaPredicted RBP26.29■■□□□ 1.8
VAC14-205ENST00000564512 PIK3R4Q99570 1358 aa26.29■■□□□ 1.8
VAC14-205ENST00000564512 CPS1P31327 1500 aa26.29■■□□□ 1.8
VAC14-205ENST00000564512 TBX22Q9Y458 520 aa26.27■■□□□ 1.8
VAC14-205ENST00000564512 ROCK2O75116 1388 aaKnown RBP26.27■■□□□ 1.8
VAC14-205ENST00000564512 STRCP1A6NGW2 1772 aa26.26■■□□□ 1.79
VAC14-205ENST00000564512 DLC1Q96QB1 1528 aa26.26■■□□□ 1.79
VAC14-205ENST00000564512 TECPR2O15040 1411 aa26.25■■□□□ 1.79
VAC14-205ENST00000564512 METP08581 1390 aa26.25■■□□□ 1.79
VAC14-205ENST00000564512 YTHDC2Q9H6S0 1430 aaKnown RBP26.23■■□□□ 1.79
VAC14-205ENST00000564512 NBPF1Q3BBV0 1214 aa26.22■■□□□ 1.79
VAC14-205ENST00000564512 PTPRUQ92729 1446 aa26.22■■□□□ 1.79
VAC14-205ENST00000564512 LRPPRCP42704 1394 aaKnown RBP26.21■■□□□ 1.79
VAC14-205ENST00000564512 SLC26A8Q96RN1 970 aa26.2■■□□□ 1.78
VAC14-205ENST00000564512 QRICH2Q9H0J4 1663 aa26.19■■□□□ 1.78
VAC14-205ENST00000564512 PTCH1Q13635 1447 aa26.19■■□□□ 1.78
VAC14-205ENST00000564512 BCANQ96GW7 911 aa26.18■■□□□ 1.78
VAC14-205ENST00000564512 NKTRP30414 1462 aaKnown RBP26.17■■□□□ 1.78
VAC14-205ENST00000564512 ABCC11Q96J66 1382 aa26.17■■□□□ 1.78
VAC14-205ENST00000564512 SENP3Q9H4L4 574 aaPredicted RBP26.16■■□□□ 1.78
VAC14-205ENST00000564512 DMRT2Q9Y5R5 561 aa26.15■■□□□ 1.78
VAC14-205ENST00000564512 TMEM132EQ6IEE7 984 aa26.14■■□□□ 1.78
VAC14-205ENST00000564512 CARD11Q9BXL7 1154 aa26.14■■□□□ 1.78
VAC14-205ENST00000564512 USP47Q96K76 1375 aa26.13■■□□□ 1.77
VAC14-205ENST00000564512 FAM135BQ49AJ0 1406 aa26.13■■□□□ 1.77
VAC14-205ENST00000564512 XIRP1Q702N8 1843 aaKnown RBP26.12■■□□□ 1.77
VAC14-205ENST00000564512 EIF3AQ14152 1382 aaKnown RBP26.11■■□□□ 1.77
VAC14-205ENST00000564512 NALCNQ8IZF0 1738 aa26.09■■□□□ 1.77
VAC14-205ENST00000564512 ADGRB2O60241 1585 aa26.09■■□□□ 1.77
VAC14-205ENST00000564512 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.07■■□□□ 1.76
VAC14-205ENST00000564512 ROBO2Q9HCK4 1378 aa26.07■■□□□ 1.76
VAC14-205ENST00000564512 KCNA6P17658 529 aa26.06■■□□□ 1.76
VAC14-205ENST00000564512 SIRT1Q96EB6 747 aa26.06■■□□□ 1.76
VAC14-205ENST00000564512 SBNO2Q9Y2G9 1366 aa26.06■■□□□ 1.76
VAC14-205ENST00000564512 LTBP4Q8N2S1 1624 aa26.04■■□□□ 1.76
VAC14-205ENST00000564512 AMOTL2Q9Y2J4 779 aa26.04■■□□□ 1.76
VAC14-205ENST00000564512 TRAK1Q9UPV9 953 aa26.02■■□□□ 1.76
VAC14-205ENST00000564512 EIF4G2P78344 907 aaKnown RBP eCLIP26.01■■□□□ 1.75
VAC14-205ENST00000564512 STK26Q9P289 416 aa26.01■■□□□ 1.75
VAC14-205ENST00000564512 PLEKHH1Q9ULM0 1364 aa25.99■■□□□ 1.75
VAC14-205ENST00000564512 CENPJQ9HC77 1338 aaPredicted RBP25.99■■□□□ 1.75
VAC14-205ENST00000564512 CDC42BPGQ6DT37 1551 aa25.99■■□□□ 1.75
VAC14-205ENST00000564512 ZNF335Q9H4Z2 1342 aaPredicted RBP25.98■■□□□ 1.75
VAC14-205ENST00000564512 LRRC7Q96NW7 1537 aa25.98■■□□□ 1.75
VAC14-205ENST00000564512 HSPA5P11021 654 aaKnown RBP25.97■■□□□ 1.75
VAC14-205ENST00000564512 TULP4Q9NRJ4 1543 aa25.97■■□□□ 1.75
VAC14-205ENST00000564512 NCOA3Q9Y6Q9 1424 aa25.97■■□□□ 1.75
VAC14-205ENST00000564512 FMN2Q9NZ56 1722 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms