RNA–Protein interactions for RNA: ENST00000564313.1

PKD1-227, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 4

Gene PKD1, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-227ENST00000564313 ARHGAP23Q9P227 1491 aa27.13■■□□□ 1.93
PKD1-227ENST00000564313 NPHP4O75161 1426 aaPredicted RBP27.11■■□□□ 1.93
PKD1-227ENST00000564313 MPHOSPH9Q99550 1183 aa27.1■■□□□ 1.93
PKD1-227ENST00000564313 MED14O60244 1454 aa27.1■■□□□ 1.93
PKD1-227ENST00000564313 RGS17Q9UGC6 210 aaPredicted RBP27.09■■□□□ 1.93
PKD1-227ENST00000564313 TMEM2Q9UHN6 1383 aa27.09■■□□□ 1.93
PKD1-227ENST00000564313 TMEM131LA2VDJ0 1609 aa27.08■■□□□ 1.93
PKD1-227ENST00000564313 SCAF11Q99590 1463 aaKnown RBP27.06■■□□□ 1.92
PKD1-227ENST00000564313 EID1Q9Y6B2 187 aa27.06■■□□□ 1.92
PKD1-227ENST00000564313 LRRC7Q96NW7 1537 aa27.06■■□□□ 1.92
PKD1-227ENST00000564313 STRCP1A6NGW2 1772 aa27.05■■□□□ 1.92
PKD1-227ENST00000564313 LTKP29376 864 aa27.04■■□□□ 1.92
PKD1-227ENST00000564313 TRIM26Q12899 539 aaPredicted RBP27.04■■□□□ 1.92
PKD1-227ENST00000564313 CLTCL1P53675 1640 aa27.03■■□□□ 1.92
PKD1-227ENST00000564313 TXNDC2Q86VQ3 553 aa27.03■■□□□ 1.92
PKD1-227ENST00000564313 MYO5BQ9ULV0 1848 aa27.03■■□□□ 1.92
PKD1-227ENST00000564313 IQGAP1P46940 1657 aa27.02■■□□□ 1.92
PKD1-227ENST00000564313 HDGFP51858 240 aaKnown RBP27.02■■□□□ 1.92
PKD1-227ENST00000564313 CHGAP10645 457 aaKnown RBP27.01■■□□□ 1.91
PKD1-227ENST00000564313 KIF1BO60333 1816 aa27■■□□□ 1.91
PKD1-227ENST00000564313 ZFYVE9O95405 1425 aa26.97■■□□□ 1.91
PKD1-227ENST00000564313 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.96■■□□□ 1.91
PKD1-227ENST00000564313 CCDC144AA2RUR9 1427 aa26.96■■□□□ 1.91
PKD1-227ENST00000564313 RIMS2Q9UQ26 1411 aa26.96■■□□□ 1.91
PKD1-227ENST00000564313 FOXD1Q16676 465 aa26.95■■□□□ 1.9
PKD1-227ENST00000564313 PPP1R15AO75807 674 aaPredicted RBP26.9■■□□□ 1.9
PKD1-227ENST00000564313 POTEAQ6S8J7 498 aa26.89■■□□□ 1.9
PKD1-227ENST00000564313 PLEKHG1Q9ULL1 1385 aa26.88■■□□□ 1.89
PKD1-227ENST00000564313 ZNF326Q5BKZ1 582 aaKnown RBP26.88■■□□□ 1.89
PKD1-227ENST00000564313 RPGRIP1LQ68CZ1 1315 aa26.84■■□□□ 1.89
PKD1-227ENST00000564313 NEXMIFQ5QGS0 1516 aa26.83■■□□□ 1.89
PKD1-227ENST00000564313 ANKRD30BQ9BXX2 1392 aa26.83■■□□□ 1.88
PKD1-227ENST00000564313 XIRP1Q702N8 1843 aaKnown RBP26.81■■□□□ 1.88
PKD1-227ENST00000564313 SLC26A8Q96RN1 970 aa26.81■■□□□ 1.88
PKD1-227ENST00000564313 NUTM2DQ5VT03 806 aaPredicted RBP26.8■■□□□ 1.88
PKD1-227ENST00000564313 BCANQ96GW7 911 aa26.8■■□□□ 1.88
PKD1-227ENST00000564313 DIP2AQ14689 1571 aa26.8■■□□□ 1.88
PKD1-227ENST00000564313 SPATA31E1Q6ZUB1 1445 aa26.79■■□□□ 1.88
PKD1-227ENST00000564313 FAM135BQ49AJ0 1406 aa26.77■■□□□ 1.88
PKD1-227ENST00000564313 PPLO60437 1756 aa26.76■■□□□ 1.88
PKD1-227ENST00000564313 VGFO15240 615 aaPredicted RBP26.76■■□□□ 1.87
PKD1-227ENST00000564313 SETBP1Q9Y6X0 1596 aa26.75■■□□□ 1.87
PKD1-227ENST00000564313 TBX22Q9Y458 520 aa26.74■■□□□ 1.87
PKD1-227ENST00000564313 ADAMTS13Q76LX8 1427 aa26.72■■□□□ 1.87
PKD1-227ENST00000564313 PIK3R4Q99570 1358 aa26.71■■□□□ 1.87
PKD1-227ENST00000564313 SETD1AO15047 1707 aaKnown RBP26.7■■□□□ 1.87
PKD1-227ENST00000564313 IFT172Q9UG01 1749 aa26.7■■□□□ 1.87
PKD1-227ENST00000564313 RGL3Q3MIN7 710 aa26.7■■□□□ 1.86
PKD1-227ENST00000564313 NRXN3Q9Y4C0 1643 aa26.69■■□□□ 1.86
PKD1-227ENST00000564313 KCNA6P17658 529 aa26.69■■□□□ 1.86
PKD1-227ENST00000564313 NWD1Q149M9 1564 aa26.68■■□□□ 1.86
PKD1-227ENST00000564313 NKTRP30414 1462 aaKnown RBP26.66■■□□□ 1.86
PKD1-227ENST00000564313 CHD2O14647 1828 aaKnown RBP26.65■■□□□ 1.86
PKD1-227ENST00000564313 TMEM94Q12767 1356 aa26.65■■□□□ 1.86
PKD1-227ENST00000564313 ROBO1Q9Y6N7 1651 aa26.65■■□□□ 1.86
PKD1-227ENST00000564313 DHX57Q6P158 1386 aaKnown RBP26.63■■□□□ 1.85
PKD1-227ENST00000564313 MYOM2P54296 1465 aa26.62■■□□□ 1.85
PKD1-227ENST00000564313 STAC3Q96MF2 364 aa26.61■■□□□ 1.85
PKD1-227ENST00000564313 PROSER2Q86WR7 435 aaPredicted RBP26.58■■□□□ 1.85
PKD1-227ENST00000564313 RBM33Q96EV2 1170 aaKnown RBP26.58■■□□□ 1.85
PKD1-227ENST00000564313 PCGF6Q9BYE7 350 aa26.57■■□□□ 1.84
PKD1-227ENST00000564313 ADGRF5Q8IZF2 1346 aa26.57■■□□□ 1.84
PKD1-227ENST00000564313 PIK3C2GO75747 1445 aa26.56■■□□□ 1.84
PKD1-227ENST00000564313 NRXN1Q9ULB1 1477 aa26.56■■□□□ 1.84
PKD1-227ENST00000564313 METP08581 1390 aa26.54■■□□□ 1.84
PKD1-227ENST00000564313 XRN1Q8IZH2 1706 aaKnown RBP26.53■■□□□ 1.84
PKD1-227ENST00000564313 LAMC1P11047 1609 aa26.53■■□□□ 1.84
PKD1-227ENST00000564313 PTPRUQ92729 1446 aa26.52■■□□□ 1.84
PKD1-227ENST00000564313 UPF1Q92900 1129 aaKnown RBP eCLIP26.52■■□□□ 1.84
PKD1-227ENST00000564313 AMOTL2Q9Y2J4 779 aa26.52■■□□□ 1.84
PKD1-227ENST00000564313 NCOA3Q9Y6Q9 1424 aa26.51■■□□□ 1.83
PKD1-227ENST00000564313 JCADQ9P266 1359 aa26.51■■□□□ 1.83
PKD1-227ENST00000564313 DCAF11Q8TEB1 546 aa26.5■■□□□ 1.83
PKD1-227ENST00000564313 PHLPP1O60346 1717 aa26.5■■□□□ 1.83
PKD1-227ENST00000564313 PRAG1Q86YV5 1406 aa26.48■■□□□ 1.83
PKD1-227ENST00000564313 SLAIN2Q9P270 581 aa26.46■■□□□ 1.83
PKD1-227ENST00000564313 C14orf93Q9H972 538 aaKnown RBP26.45■■□□□ 1.82
PKD1-227ENST00000564313 PTCH1Q13635 1447 aa26.45■■□□□ 1.82
PKD1-227ENST00000564313 MSH6P52701 1360 aa26.44■■□□□ 1.82
PKD1-227ENST00000564313 KDM2AQ9Y2K7 1162 aa26.43■■□□□ 1.82
PKD1-227ENST00000564313 LRP6O75581 1613 aa26.42■■□□□ 1.82
PKD1-227ENST00000564313 SIN3AQ96ST3 1273 aa26.41■■□□□ 1.82
PKD1-227ENST00000564313 COL16A1Q07092 1604 aaPredicted RBP26.4■■□□□ 1.82
PKD1-227ENST00000564313 LRPPRCP42704 1394 aaKnown RBP26.39■■□□□ 1.82
PKD1-227ENST00000564313 NEUROD1Q13562 356 aa26.39■■□□□ 1.82
PKD1-227ENST00000564313 C14orf37Q86TY3 774 aa26.39■■□□□ 1.82
PKD1-227ENST00000564313 ASXL1Q8IXJ9 1541 aa26.39■■□□□ 1.81
PKD1-227ENST00000564313 TECPR2O15040 1411 aa26.39■■□□□ 1.81
PKD1-227ENST00000564313 ZNF772Q68DY9 489 aaPredicted RBP26.38■■□□□ 1.81
PKD1-227ENST00000564313 KNDC1Q76NI1 1749 aa26.38■■□□□ 1.81
PKD1-227ENST00000564313 CFAP70Q5T0N1 1121 aa26.37■■□□□ 1.81
PKD1-227ENST00000564313 ABCC11Q96J66 1382 aa26.36■■□□□ 1.81
PKD1-227ENST00000564313 MEX3CQ5U5Q3 659 aaKnown RBP26.36■■□□□ 1.81
PKD1-227ENST00000564313 YTHDC2Q9H6S0 1430 aaKnown RBP26.36■■□□□ 1.81
PKD1-227ENST00000564313 SPATA31A6Q5VVP1 1343 aa26.36■■□□□ 1.81
PKD1-227ENST00000564313 C19orf44Q9H6X5 657 aa26.35■■□□□ 1.81
PKD1-227ENST00000564313 CLSPNQ9HAW4 1339 aa26.35■■□□□ 1.81
PKD1-227ENST00000564313 KIAA1210Q9ULL0 1709 aa26.34■■□□□ 1.81
PKD1-227ENST00000564313 DCCP43146 1447 aa26.34■■□□□ 1.81
PKD1-227ENST00000564313 L3MBTL2Q969R5 705 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms