RNA–Protein interactions for RNA: ENST00000563623.5

ABCA3-203, Transcript of ATP binding cassette subfamily A member 3, humanhuman

TSL 1 (best)

Gene ABCA3, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-203ENST00000563623 CLUAP1Q96AJ1 413 aa15.23■□□□□ 0.03
ABCA3-203ENST00000563623 CEP170Q5SW79 1584 aa15.22■□□□□ 0.03
ABCA3-203ENST00000563623 BLMP54132 1417 aaPredicted RBP15.22■□□□□ 0.03
ABCA3-203ENST00000563623 ABCC10Q5T3U5 1492 aa15.22■□□□□ 0.03
ABCA3-203ENST00000563623 AMER1Q5JTC6 1135 aaPredicted RBP15.22■□□□□ 0.03
ABCA3-203ENST00000563623 CROCC2H7BZ55 1655 aa15.21■□□□□ 0.03
ABCA3-203ENST00000563623 UPF2Q9HAU5 1272 aaKnown RBP15.21■□□□□ 0.03
ABCA3-203ENST00000563623 CENPJQ9HC77 1338 aaPredicted RBP15.21■□□□□ 0.02
ABCA3-203ENST00000563623 KDM5DQ9BY66 1539 aa15.2■□□□□ 0.02
ABCA3-203ENST00000563623 CDC42BPAQ5VT25 1732 aa15.2■□□□□ 0.02
ABCA3-203ENST00000563623 BECN1Q14457 450 aa15.2■□□□□ 0.02
ABCA3-203ENST00000563623 E9PSI1 815 aa15.19■□□□□ 0.02
ABCA3-203ENST00000563623 IGHDP01880 384 aa15.19■□□□□ 0.02
ABCA3-203ENST00000563623 ZMYM4Q5VZL5 1548 aa15.19■□□□□ 0.02
ABCA3-203ENST00000563623 EFCAB2Q5VUJ9 269 aa15.19■□□□□ 0.02
ABCA3-203ENST00000563623 CFAP70Q5T0N1 1121 aa15.18■□□□□ 0.02
ABCA3-203ENST00000563623 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
ABCA3-203ENST00000563623 GPRASP1Q5JY77 1395 aa15.18■□□□□ 0.02
ABCA3-203ENST00000563623 DMRT2Q9Y5R5 561 aa15.18■□□□□ 0.02
ABCA3-203ENST00000563623 SYCP2Q9BX26 1530 aa15.18■□□□□ 0.02
ABCA3-203ENST00000563623 MORC1Q86VD1 984 aa15.17■□□□□ 0.02
ABCA3-203ENST00000563623 AFAP1Q8N556 730 aa15.17■□□□□ 0.02
ABCA3-203ENST00000563623 SPAG9O60271 1321 aaKnown RBP15.16■□□□□ 0.02
ABCA3-203ENST00000563623 MAGI2Q86UL8 1455 aa15.16■□□□□ 0.02
ABCA3-203ENST00000563623 KIF3BO15066 747 aa15.16■□□□□ 0.02
ABCA3-203ENST00000563623 TRPM1Q7Z4N2 1603 aa15.15■□□□□ 0.02
ABCA3-203ENST00000563623 ADCY10Q96PN6 1610 aa15.14■□□□□ 0.01
ABCA3-203ENST00000563623 CGNL1Q0VF96 1302 aa15.14■□□□□ 0.01
ABCA3-203ENST00000563623 SEC24BO95487 1268 aa15.14■□□□□ 0.01
ABCA3-203ENST00000563623 A0A0U1RQG5 324 aaPredicted RBP15.13■□□□□ 0.01
ABCA3-203ENST00000563623 TRAK1Q9UPV9 953 aa15.13■□□□□ 0.01
ABCA3-203ENST00000563623 GZF1Q9H116 711 aaPredicted RBP15.12■□□□□ 0.01
ABCA3-203ENST00000563623 E9PCH4 1651 aa15.12■□□□□ 0.01
ABCA3-203ENST00000563623 POGKQ9P215 609 aa15.12■□□□□ 0.01
ABCA3-203ENST00000563623 EIF3AQ14152 1382 aaKnown RBP15.11■□□□□ 0.01
ABCA3-203ENST00000563623 SAMD9LQ8IVG5 1584 aa15.11■□□□□ 0.01
ABCA3-203ENST00000563623 TNNQ9UQP3 1299 aa15.11■□□□□ 0.01
ABCA3-203ENST00000563623 NUP160Q12769 1436 aa15.11■□□□□ 0.01
ABCA3-203ENST00000563623 NKTRP30414 1462 aaKnown RBP15.1■□□□□ 0.01
ABCA3-203ENST00000563623 FTSJ3Q8IY81 847 aaKnown RBP15.1■□□□□ 0.01
ABCA3-203ENST00000563623 ABCA8O94911 1581 aa15.1■□□□□ 0.01
ABCA3-203ENST00000563623 ZNF521Q96K83 1311 aa15.1■□□□□ 0.01
ABCA3-203ENST00000563623 MAPK8IP3Q9UPT6 1336 aa15.1■□□□□ 0.01
ABCA3-203ENST00000563623 WWC1Q8IX03 1113 aa15.1■□□□□ 0.01
ABCA3-203ENST00000563623 SAFB2Q14151 953 aaKnown RBP eCLIP15.09■□□□□ 0.01
ABCA3-203ENST00000563623 TCP11L2Q8N4U5 519 aa15.09■□□□□ 0.01
ABCA3-203ENST00000563623 PRDM15P57071 1507 aaPredicted RBP15.09■□□□□ 0.01
ABCA3-203ENST00000563623 WDR7Q9Y4E6 1490 aa15.08■□□□□ 0.01
ABCA3-203ENST00000563623 U2AF1L5P0DN76 240 aaPredicted RBP15.08■□□□□ 0
ABCA3-203ENST00000563623 U2AF1Q01081 240 aaKnown RBP eCLIP15.08■□□□□ 0
ABCA3-203ENST00000563623 ARHGEF5Q12774 1597 aa15.08■□□□□ 0
ABCA3-203ENST00000563623 PDE3AQ14432 1141 aa15.08■□□□□ 0
ABCA3-203ENST00000563623 NUTM2DQ5VT03 806 aaPredicted RBP15.07■□□□□ 0
ABCA3-203ENST00000563623 PMFBP1Q8TBY8 1022 aa15.07■□□□□ 0
ABCA3-203ENST00000563623 CARD14Q9BXL6 1004 aa15.07■□□□□ 0
ABCA3-203ENST00000563623 SLC12A5Q9H2X9 1139 aa15.07■□□□□ 0
ABCA3-203ENST00000563623 PDZRN3Q9UPQ7 1066 aa15.07■□□□□ 0
ABCA3-203ENST00000563623 MFAP1P55081 439 aaKnown RBP15.07■□□□□ 0
ABCA3-203ENST00000563623 CFAP53Q96M91 514 aa15.07■□□□□ 0
ABCA3-203ENST00000563623 U2SURPO15042 1029 aaKnown RBP15.07■□□□□ 0
ABCA3-203ENST00000563623 INSRP06213 1382 aa15.07■□□□□ 0
ABCA3-203ENST00000563623 ASXL1Q8IXJ9 1541 aa15.07■□□□□ 0
ABCA3-203ENST00000563623 KANK1Q14678 1352 aa15.06■□□□□ 0
ABCA3-203ENST00000563623 ADGRF5Q8IZF2 1346 aa15.05■□□□□ 0
ABCA3-203ENST00000563623 RWDD1Q9H446 243 aaPredicted RBP15.05■□□□□ 0
ABCA3-203ENST00000563623 SCAF11Q99590 1463 aaKnown RBP15.05■□□□□ 0
ABCA3-203ENST00000563623 ZMYND15Q9H091 742 aa15.05■□□□□ -0
ABCA3-203ENST00000563623 TMEM132EQ6IEE7 984 aa15.05■□□□□ -0
ABCA3-203ENST00000563623 EIF2AK4Q9P2K8 1649 aaKnown RBP15.05■□□□□ -0
ABCA3-203ENST00000563623 PCDHB15Q9Y5E8 787 aa15.04■□□□□ -0
ABCA3-203ENST00000563623 MTHFSP49914 203 aa15.04■□□□□ -0
ABCA3-203ENST00000563623 RUNDC1Q96C34 613 aa15.04■□□□□ -0
ABCA3-203ENST00000563623 RLBP1P12271 317 aa15.04■□□□□ -0
ABCA3-203ENST00000563623 RARSP54136 660 aaKnown RBP15.03■□□□□ -0
ABCA3-203ENST00000563623 TRMT2AQ8IZ69 625 aaKnown RBP15.03■□□□□ -0
ABCA3-203ENST00000563623 PIK3C2GO75747 1445 aa15.02■□□□□ -0
ABCA3-203ENST00000563623 ITPRIPQ8IWB1 547 aa15.02□□□□□ -0.01
ABCA3-203ENST00000563623 SMC4Q9NTJ3 1288 aa15.02□□□□□ -0.01
ABCA3-203ENST00000563623 TRAPPC8Q9Y2L5 1435 aa15.01□□□□□ -0.01
ABCA3-203ENST00000563623 TSR2Q969E8 191 aaKnown RBP15.01□□□□□ -0.01
ABCA3-203ENST00000563623 CDC42BPBQ9Y5S2 1711 aa15.01□□□□□ -0.01
ABCA3-203ENST00000563623 DUOX2Q9NRD8 1548 aa15□□□□□ -0.01
ABCA3-203ENST00000563623 GGT6Q6P531 493 aa15□□□□□ -0.01
ABCA3-203ENST00000563623 MYH16Q9H6N6 1097 aa14.99□□□□□ -0.01
ABCA3-203ENST00000563623 L1TD1Q5T7N2 865 aaKnown RBP14.99□□□□□ -0.01
ABCA3-203ENST00000563623 TBC1D2Q9BYX2 928 aa14.99□□□□□ -0.01
ABCA3-203ENST00000563623 USP19O94966 1318 aa14.99□□□□□ -0.01
ABCA3-203ENST00000563623 TTC37Q6PGP7 1564 aa14.99□□□□□ -0.01
ABCA3-203ENST00000563623 HSP90AA1P07900 732 aaKnown RBP14.99□□□□□ -0.01
ABCA3-203ENST00000563623 NGEFQ8N5V2 710 aa14.99□□□□□ -0.01
ABCA3-203ENST00000563623 NSD3Q9BZ95 1437 aa14.98□□□□□ -0.01
ABCA3-203ENST00000563623 PREX2Q70Z35 1606 aa14.98□□□□□ -0.01
ABCA3-203ENST00000563623 ZKSCAN2Q63HK3 967 aa14.98□□□□□ -0.01
ABCA3-203ENST00000563623 STK26Q9P289 416 aa14.98□□□□□ -0.01
ABCA3-203ENST00000563623 STAC3Q96MF2 364 aa14.97□□□□□ -0.01
ABCA3-203ENST00000563623 MYO5CQ9NQX4 1742 aa14.97□□□□□ -0.01
ABCA3-203ENST00000563623 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.97□□□□□ -0.01
ABCA3-203ENST00000563623 DZIP1LQ8IYY4 767 aaKnown RBP14.97□□□□□ -0.01
ABCA3-203ENST00000563623 GOLGA6L3A6NEY3 463 aa14.96□□□□□ -0.01
ABCA3-203ENST00000563623 MAST1Q9Y2H9 1570 aa14.96□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms