RNA–Protein interactions for RNA: ENST00000563283.1

CNOT1-205, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-205ENST00000563283 DNAJB2P25686 324 aa9.67□□□□□ -0.86
CNOT1-205ENST00000563283 GPIHBP1Q8IV16 184 aa9.67□□□□□ -0.86
CNOT1-205ENST00000563283 TULP1O00294 542 aaPredicted RBP9.66□□□□□ -0.86
CNOT1-205ENST00000563283 FAM161AQ3B820 660 aa9.66□□□□□ -0.86
CNOT1-205ENST00000563283 SLF2Q8IX21 1173 aa9.66□□□□□ -0.86
CNOT1-205ENST00000563283 RNF40O75150 1001 aa9.65□□□□□ -0.86
CNOT1-205ENST00000563283 NECTIN2Q92692 538 aa9.65□□□□□ -0.86
CNOT1-205ENST00000563283 RCCD1A6NED2 376 aa9.64□□□□□ -0.87
CNOT1-205ENST00000563283 FECHP22830 423 aa9.64□□□□□ -0.87
CNOT1-205ENST00000563283 PXYLP1Q8TE99 480 aa9.64□□□□□ -0.87
CNOT1-205ENST00000563283 TMEM134Q9H6X4 195 aa9.64□□□□□ -0.87
CNOT1-205ENST00000563283 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.63□□□□□ -0.87
CNOT1-205ENST00000563283 OATP04181 439 aa9.63□□□□□ -0.87
CNOT1-205ENST00000563283 SLC4A3P48751 1232 aa9.63□□□□□ -0.87
CNOT1-205ENST00000563283 SMARCA4P51532 1647 aa9.62□□□□□ -0.87
CNOT1-205ENST00000563283 A0A0G2JS52 829 aa9.61□□□□□ -0.87
CNOT1-205ENST00000563283 METTL3Q86U44 580 aaKnown RBP9.61□□□□□ -0.87
CNOT1-205ENST00000563283 APLP1P51693 650 aa9.6□□□□□ -0.87
CNOT1-205ENST00000563283 KCNC4Q03721 635 aa9.6□□□□□ -0.87
CNOT1-205ENST00000563283 MROH2BQ7Z745 1585 aa9.59□□□□□ -0.87
CNOT1-205ENST00000563283 TJAP1Q5JTD0 557 aa9.58□□□□□ -0.88
CNOT1-205ENST00000563283 ATAD2BQ9ULI0 1458 aa9.57□□□□□ -0.88
CNOT1-205ENST00000563283 BAZ1AQ9NRL2 1556 aaPredicted RBP9.56□□□□□ -0.88
CNOT1-205ENST00000563283 NCAPD3P42695 1498 aa9.56□□□□□ -0.88
CNOT1-205ENST00000563283 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.56□□□□□ -0.88
CNOT1-205ENST00000563283 MTRQ99707 1265 aa9.56□□□□□ -0.88
CNOT1-205ENST00000563283 PRR14Q9BWN1 585 aa9.56□□□□□ -0.88
CNOT1-205ENST00000563283 IL21Q9HBE4 155 aa9.55□□□□□ -0.88
CNOT1-205ENST00000563283 RGS20O76081 388 aa9.54□□□□□ -0.88
CNOT1-205ENST00000563283 MAP2K5Q13163 448 aa9.54□□□□□ -0.88
CNOT1-205ENST00000563283 PEG3Q9GZU2 1588 aa9.53□□□□□ -0.88
CNOT1-205ENST00000563283 SLC10A3P09131 477 aa9.52□□□□□ -0.89
CNOT1-205ENST00000563283 LMOD2Q6P5Q4 547 aa9.52□□□□□ -0.89
CNOT1-205ENST00000563283 PHOX2BQ99453 314 aa9.52□□□□□ -0.89
CNOT1-205ENST00000563283 CFHP08603 1231 aa9.51□□□□□ -0.89
CNOT1-205ENST00000563283 KMT5BQ4FZB7 885 aa9.51□□□□□ -0.89
CNOT1-205ENST00000563283 DAXXQ9UER7 740 aaPredicted RBP9.51□□□□□ -0.89
CNOT1-205ENST00000563283 PCDHB3Q9Y5E6 796 aa9.5□□□□□ -0.89
CNOT1-205ENST00000563283 SMARCA2P51531 1590 aa9.5□□□□□ -0.89
CNOT1-205ENST00000563283 WIZO95785 1651 aa9.49□□□□□ -0.89
CNOT1-205ENST00000563283 ACTN4O43707 911 aaKnown RBP9.49□□□□□ -0.89
CNOT1-205ENST00000563283 COPS2P61201 443 aa9.49□□□□□ -0.89
CNOT1-205ENST00000563283 ZNF516Q92618 1163 aa9.49□□□□□ -0.89
CNOT1-205ENST00000563283 MINK1Q8N4C8 1332 aaPredicted RBP9.49□□□□□ -0.89
CNOT1-205ENST00000563283 IRF6O14896 467 aa9.48□□□□□ -0.89
CNOT1-205ENST00000563283 RSPH4AQ5TD94 716 aa9.48□□□□□ -0.89
CNOT1-205ENST00000563283 NLRP7Q8WX94 980 aa9.48□□□□□ -0.89
CNOT1-205ENST00000563283 HMGXB3Q12766 1538 aa9.47□□□□□ -0.89
CNOT1-205ENST00000563283 RSF1Q96T23 1441 aaPredicted RBP9.47□□□□□ -0.89
CNOT1-205ENST00000563283 BLOC1S3Q6QNY0 202 aa9.46□□□□□ -0.9
CNOT1-205ENST00000563283 ZPR1O75312 459 aa9.45□□□□□ -0.9
CNOT1-205ENST00000563283 SULF1Q8IWU6 871 aa9.45□□□□□ -0.9
CNOT1-205ENST00000563283 CCDC102AQ96A19 550 aa9.45□□□□□ -0.9
CNOT1-205ENST00000563283 DDX11L8A8MPP1 907 aa9.44□□□□□ -0.9
CNOT1-205ENST00000563283 RDH13Q8NBN7 331 aa9.44□□□□□ -0.9
CNOT1-205ENST00000563283 BAZ1BQ9UIG0 1483 aaKnown RBP9.43□□□□□ -0.9
CNOT1-205ENST00000563283 NKX2-3Q8TAU0 364 aa9.43□□□□□ -0.9
CNOT1-205ENST00000563283 PPP1R18Q6NYC8 613 aa9.41□□□□□ -0.9
CNOT1-205ENST00000563283 BARGINQ6ZT62 677 aa9.41□□□□□ -0.9
CNOT1-205ENST00000563283 ZC3H15Q8WU90 426 aaKnown RBP9.41□□□□□ -0.9
CNOT1-205ENST00000563283 NR1I2O75469 434 aa9.4□□□□□ -0.9
CNOT1-205ENST00000563283 ZMYND10O75800 440 aa9.4□□□□□ -0.9
CNOT1-205ENST00000563283 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.4□□□□□ -0.9
CNOT1-205ENST00000563283 TLL1O43897 1013 aa9.39□□□□□ -0.91
CNOT1-205ENST00000563283 GCGRP47871 477 aa9.39□□□□□ -0.91
CNOT1-205ENST00000563283 MDM2Q00987 491 aaPredicted RBP9.39□□□□□ -0.91
CNOT1-205ENST00000563283 NESP48681 1621 aa9.38□□□□□ -0.91
CNOT1-205ENST00000563283 CD46P15529 392 aa9.37□□□□□ -0.91
CNOT1-205ENST00000563283 GGCXP38435 758 aa9.37□□□□□ -0.91
CNOT1-205ENST00000563283 PUS10Q3MIT2 529 aaKnown RBP9.37□□□□□ -0.91
CNOT1-205ENST00000563283 SLC24A1O60721 1099 aa9.36□□□□□ -0.91
CNOT1-205ENST00000563283 FUT2Q10981 343 aa9.36□□□□□ -0.91
CNOT1-205ENST00000563283 MORN1Q5T089 497 aa9.36□□□□□ -0.91
CNOT1-205ENST00000563283 KRI1Q8N9T8 703 aaKnown RBP9.36□□□□□ -0.91
CNOT1-205ENST00000563283 TMUB1Q9BVT8 246 aa9.36□□□□□ -0.91
CNOT1-205ENST00000563283 GPCPD1Q9NPB8 672 aa9.36□□□□□ -0.91
CNOT1-205ENST00000563283 ADH1BP00325 375 aa9.35□□□□□ -0.91
CNOT1-205ENST00000563283 CLCN1P35523 988 aa9.35□□□□□ -0.91
CNOT1-205ENST00000563283 ATP6V1AP38606 617 aa9.35□□□□□ -0.91
CNOT1-205ENST00000563283 SCUBE3Q8IX30 993 aa9.35□□□□□ -0.91
CNOT1-205ENST00000563283 TOP2AP11388 1531 aaKnown RBP9.33□□□□□ -0.92
CNOT1-205ENST00000563283 FAM217BQ9NTX9 383 aaPredicted RBP9.32□□□□□ -0.92
CNOT1-205ENST00000563283 RNF223E7ERA6 249 aa9.31□□□□□ -0.92
CNOT1-205ENST00000563283 S1PR4O95977 384 aa9.31□□□□□ -0.92
CNOT1-205ENST00000563283 AMHR2Q16671 573 aa9.31□□□□□ -0.92
CNOT1-205ENST00000563283 IRX2Q9BZI1 471 aaPredicted RBP9.31□□□□□ -0.92
CNOT1-205ENST00000563283 PRKD2Q9BZL6 878 aa9.31□□□□□ -0.92
CNOT1-205ENST00000563283 V9GY48 417 aaPredicted RBP9.31□□□□□ -0.92
CNOT1-205ENST00000563283 GRIPAP1Q4V328 841 aa9.3□□□□□ -0.92
CNOT1-205ENST00000563283 THAP11Q96EK4 314 aa9.3□□□□□ -0.92
CNOT1-205ENST00000563283 SPSB2Q99619 263 aa9.3□□□□□ -0.92
CNOT1-205ENST00000563283 REPIN1Q9BWE0 567 aaKnown RBP9.3□□□□□ -0.92
CNOT1-205ENST00000563283 SLC27A5Q9Y2P5 690 aa9.3□□□□□ -0.92
CNOT1-205ENST00000563283 KDM4AO75164 1064 aa9.29□□□□□ -0.92
CNOT1-205ENST00000563283 SLC6A16Q9GZN6 736 aa9.29□□□□□ -0.92
CNOT1-205ENST00000563283 SALL2Q9Y467 1007 aaPredicted RBP9.29□□□□□ -0.92
CNOT1-205ENST00000563283 USP46P62068 366 aa9.28□□□□□ -0.92
CNOT1-205ENST00000563283 ANKLE1Q8NAG6 615 aa9.28□□□□□ -0.92
CNOT1-205ENST00000563283 FMNL1O95466 1100 aaPredicted RBP9.27□□□□□ -0.93
CNOT1-205ENST00000563283 LAMC3Q9Y6N6 1575 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms