RNA–Protein interactions for RNA: ENST00000563246.1

SCAPER-206, Transcript of S-phase cyclin A associated protein in the ER, humanhuman

TSL 3

Gene SCAPER, Length 552 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPER-206ENST00000563246 PADI6Q6TGC4 694 aa11.36□□□□□ -0.59
SCAPER-206ENST00000563246 SLF2Q8IX21 1173 aa11.36□□□□□ -0.59
SCAPER-206ENST00000563246 BAZ1AQ9NRL2 1556 aaPredicted RBP11.36□□□□□ -0.59
SCAPER-206ENST00000563246 CADPSQ9ULU8 1353 aa11.34□□□□□ -0.59
SCAPER-206ENST00000563246 RNF40O75150 1001 aa11.34□□□□□ -0.59
SCAPER-206ENST00000563246 SLC4A3P48751 1232 aa11.34□□□□□ -0.59
SCAPER-206ENST00000563246 Q6ZNB5 142 aa11.34□□□□□ -0.59
SCAPER-206ENST00000563246 WDR62O43379 1518 aa11.34□□□□□ -0.59
SCAPER-206ENST00000563246 APLP1P51693 650 aa11.33□□□□□ -0.6
SCAPER-206ENST00000563246 MRC2Q9UBG0 1479 aa11.32□□□□□ -0.6
SCAPER-206ENST00000563246 SWT1Q5T5J6 900 aaKnown RBP11.31□□□□□ -0.6
SCAPER-206ENST00000563246 EYA1Q99502 592 aa11.31□□□□□ -0.6
SCAPER-206ENST00000563246 V9GY48 417 aaPredicted RBP11.31□□□□□ -0.6
SCAPER-206ENST00000563246 PPP1R18Q6NYC8 613 aa11.3□□□□□ -0.6
SCAPER-206ENST00000563246 PRR14Q9BWN1 585 aa11.3□□□□□ -0.6
SCAPER-206ENST00000563246 PRKD2Q9BZL6 878 aa11.28□□□□□ -0.6
SCAPER-206ENST00000563246 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.28□□□□□ -0.6
SCAPER-206ENST00000563246 ZNF516Q92618 1163 aa11.27□□□□□ -0.61
SCAPER-206ENST00000563246 GGCXP38435 758 aa11.26□□□□□ -0.61
SCAPER-206ENST00000563246 KCNV2Q8TDN2 545 aa11.26□□□□□ -0.61
SCAPER-206ENST00000563246 MLLT3P42568 568 aaPredicted RBP11.25□□□□□ -0.61
SCAPER-206ENST00000563246 PTGDRQ13258 359 aa11.25□□□□□ -0.61
SCAPER-206ENST00000563246 MROH2BQ7Z745 1585 aa11.24□□□□□ -0.61
SCAPER-206ENST00000563246 GFRA3O60609 400 aa11.24□□□□□ -0.61
SCAPER-206ENST00000563246 TMUB1Q9BVT8 246 aa11.24□□□□□ -0.61
SCAPER-206ENST00000563246 TSHZ2Q9NRE2 1034 aa11.24□□□□□ -0.61
SCAPER-206ENST00000563246 DNAJB2P25686 324 aa11.23□□□□□ -0.61
SCAPER-206ENST00000563246 NRG2O14511 850 aaPredicted RBP11.22□□□□□ -0.61
SCAPER-206ENST00000563246 P3H3Q8IVL6 736 aa11.22□□□□□ -0.61
SCAPER-206ENST00000563246 RBM46Q8TBY0 533 aaKnown RBP11.22□□□□□ -0.61
SCAPER-206ENST00000563246 ZPR1O75312 459 aa11.21□□□□□ -0.61
SCAPER-206ENST00000563246 COPS2P61201 443 aa11.2□□□□□ -0.62
SCAPER-206ENST00000563246 NKX2-3Q8TAU0 364 aa11.19□□□□□ -0.62
SCAPER-206ENST00000563246 TMEM134Q9H6X4 195 aa11.19□□□□□ -0.62
SCAPER-206ENST00000563246 PCDHB3Q9Y5E6 796 aa11.19□□□□□ -0.62
SCAPER-206ENST00000563246 TRAF7Q6Q0C0 670 aa11.18□□□□□ -0.62
SCAPER-206ENST00000563246 ADGRG1Q9Y653 693 aa11.18□□□□□ -0.62
SCAPER-206ENST00000563246 CEP164Q9UPV0 1460 aa11.18□□□□□ -0.62
SCAPER-206ENST00000563246 RIMBP3CA6NJZ7 1639 aa11.17□□□□□ -0.62
SCAPER-206ENST00000563246 RIMBP3BA6NNM3 1639 aa11.17□□□□□ -0.62
SCAPER-206ENST00000563246 RIMBP3Q9UFD9 1639 aa11.17□□□□□ -0.62
SCAPER-206ENST00000563246 CFTRP13569 1480 aa11.15□□□□□ -0.62
SCAPER-206ENST00000563246 FANCD2Q9BXW9 1451 aa11.15□□□□□ -0.62
SCAPER-206ENST00000563246 LCE2BO14633 110 aa11.14□□□□□ -0.63
SCAPER-206ENST00000563246 KMT5BQ4FZB7 885 aa11.14□□□□□ -0.63
SCAPER-206ENST00000563246 NUTM2FA1L443 756 aa11.13□□□□□ -0.63
SCAPER-206ENST00000563246 RCCD1A6NED2 376 aa11.13□□□□□ -0.63
SCAPER-206ENST00000563246 FCHSD2O94868 740 aa11.13□□□□□ -0.63
SCAPER-206ENST00000563246 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.12□□□□□ -0.63
SCAPER-206ENST00000563246 ACTN4O43707 911 aaKnown RBP11.12□□□□□ -0.63
SCAPER-206ENST00000563246 BLOC1S3Q6QNY0 202 aa11.12□□□□□ -0.63
SCAPER-206ENST00000563246 ARHGEF11O15085 1522 aa11.11□□□□□ -0.63
SCAPER-206ENST00000563246 PDZRN3Q9UPQ7 1066 aa11.11□□□□□ -0.63
SCAPER-206ENST00000563246 URB2Q14146 1524 aaKnown RBP11.1□□□□□ -0.63
SCAPER-206ENST00000563246 RNF223E7ERA6 249 aa11.08□□□□□ -0.64
SCAPER-206ENST00000563246 OATP04181 439 aa11.08□□□□□ -0.64
SCAPER-206ENST00000563246 CFHP08603 1231 aa11.08□□□□□ -0.64
SCAPER-206ENST00000563246 ANKLE1Q8NAG6 615 aa11.07□□□□□ -0.64
SCAPER-206ENST00000563246 SEMA3EO15041 775 aa11.06□□□□□ -0.64
SCAPER-206ENST00000563246 HIC1Q14526 733 aa11.06□□□□□ -0.64
SCAPER-206ENST00000563246 PXYLP1Q8TE99 480 aa11.06□□□□□ -0.64
SCAPER-206ENST00000563246 WIZO95785 1651 aa11.04□□□□□ -0.64
SCAPER-206ENST00000563246 NR1I2O75469 434 aa11.04□□□□□ -0.64
SCAPER-206ENST00000563246 SLC19A1P41440 591 aa11.04□□□□□ -0.64
SCAPER-206ENST00000563246 TLL1O43897 1013 aa11.03□□□□□ -0.64
SCAPER-206ENST00000563246 ADH1BP00325 375 aa11.03□□□□□ -0.64
SCAPER-206ENST00000563246 SLC10A3P09131 477 aa11.03□□□□□ -0.64
SCAPER-206ENST00000563246 FAM161AQ3B820 660 aa11.03□□□□□ -0.64
SCAPER-206ENST00000563246 RSPH4AQ5TD94 716 aa11.03□□□□□ -0.64
SCAPER-206ENST00000563246 SMYD5Q6GMV2 418 aa11.02□□□□□ -0.65
SCAPER-206ENST00000563246 CYB5RLQ6IPT4 315 aa11.02□□□□□ -0.65
SCAPER-206ENST00000563246 IFT140Q96RY7 1462 aa11.01□□□□□ -0.65
SCAPER-206ENST00000563246 ZNF608Q9ULD9 1512 aaPredicted RBP11.01□□□□□ -0.65
SCAPER-206ENST00000563246 PRR20EP86478 221 aa11.01□□□□□ -0.65
SCAPER-206ENST00000563246 PRR20CP86479 221 aa11.01□□□□□ -0.65
SCAPER-206ENST00000563246 PRR20DP86480 221 aa11.01□□□□□ -0.65
SCAPER-206ENST00000563246 PRR20BP86481 221 aa11.01□□□□□ -0.65
SCAPER-206ENST00000563246 PRR20AP86496 221 aa11.01□□□□□ -0.65
SCAPER-206ENST00000563246 SPRYD7Q5W111 196 aa11.01□□□□□ -0.65
SCAPER-206ENST00000563246 ZNF598Q86UK7 904 aaKnown RBP11.01□□□□□ -0.65
SCAPER-206ENST00000563246 S1PR4O95977 384 aa11□□□□□ -0.65
SCAPER-206ENST00000563246 METTL3Q86U44 580 aaKnown RBP11□□□□□ -0.65
SCAPER-206ENST00000563246 EMID1Q96A84 441 aaPredicted RBP11□□□□□ -0.65
SCAPER-206ENST00000563246 TESPA1A2RU30 521 aaPredicted RBP10.99□□□□□ -0.65
SCAPER-206ENST00000563246 TRIM67Q6ZTA4 783 aa10.99□□□□□ -0.65
SCAPER-206ENST00000563246 ARAP1Q96P48 1450 aa10.99□□□□□ -0.65
SCAPER-206ENST00000563246 RSF1Q96T23 1441 aaPredicted RBP10.98□□□□□ -0.65
SCAPER-206ENST00000563246 SLC6A16Q9GZN6 736 aa10.97□□□□□ -0.65
SCAPER-206ENST00000563246 GNPATO15228 680 aa10.96□□□□□ -0.65
SCAPER-206ENST00000563246 SCUBE3Q8IX30 993 aa10.95□□□□□ -0.66
SCAPER-206ENST00000563246 DGAT1O75907 488 aa10.94□□□□□ -0.66
SCAPER-206ENST00000563246 ZNF787Q6DD87 383 aa10.94□□□□□ -0.66
SCAPER-206ENST00000563246 DAXXQ9UER7 740 aaPredicted RBP10.94□□□□□ -0.66
SCAPER-206ENST00000563246 PPEF1O14829 653 aaPredicted RBP10.93□□□□□ -0.66
SCAPER-206ENST00000563246 PKDCCQ504Y2 493 aa10.93□□□□□ -0.66
SCAPER-206ENST00000563246 RBM26Q5T8P6 1007 aaKnown RBP10.93□□□□□ -0.66
SCAPER-206ENST00000563246 ZNF697Q5TEC3 545 aa10.93□□□□□ -0.66
SCAPER-206ENST00000563246 LIAT1Q6ZQX7 453 aa10.93□□□□□ -0.66
SCAPER-206ENST00000563246 TOP2AP11388 1531 aaKnown RBP10.91□□□□□ -0.66
SCAPER-206ENST00000563246 TOPBP1Q92547 1522 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms