RNA–Protein interactions for RNA: ENST00000563235.5

SMG1-207, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 2,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-207ENST00000563235 CCER2I3L3R5 266 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 GPIHBP1Q8IV16 184 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 GABBR1Q9UBS5 961 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 COG6Q9Y2V7 657 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 E2F4Q16254 413 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 GLIPR1L2Q4G1C9 344 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 ZFYVE27Q5T4F4 411 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 RINLQ6ZS11 566 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 PPARGC1BQ86YN6 1023 aaKnown RBP6.36□□□□□ -1.39
SMG1-207ENST00000563235 NAALADL2Q58DX5 795 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 MAMSTRQ6ZN01 415 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 PARP9Q8IXQ6 854 aa6.36□□□□□ -1.39
SMG1-207ENST00000563235 ZNF330Q9Y3S2 320 aaPredicted RBP6.36□□□□□ -1.39
SMG1-207ENST00000563235 CCDC194A0A1B0GVG4 234 aa6.35□□□□□ -1.39
SMG1-207ENST00000563235 KRBA2Q6ZNG9 492 aa6.35□□□□□ -1.39
SMG1-207ENST00000563235 BAZ1AQ9NRL2 1556 aaPredicted RBP6.34□□□□□ -1.39
SMG1-207ENST00000563235 KIF4AO95239 1232 aa6.34□□□□□ -1.39
SMG1-207ENST00000563235 PRR29P0C7W0 189 aa6.34□□□□□ -1.39
SMG1-207ENST00000563235 ZC3H6P61129 1189 aaKnown RBP6.34□□□□□ -1.39
SMG1-207ENST00000563235 MYBPC2Q14324 1141 aa6.34□□□□□ -1.39
SMG1-207ENST00000563235 DNAJC14Q6Y2X3 702 aaPredicted RBP6.34□□□□□ -1.39
SMG1-207ENST00000563235 LARGE2Q8N3Y3 721 aa6.34□□□□□ -1.39
SMG1-207ENST00000563235 PSME1Q06323 249 aa6.34□□□□□ -1.39
SMG1-207ENST00000563235 SMC5Q8IY18 1101 aa6.34□□□□□ -1.39
SMG1-207ENST00000563235 SPOCK3Q9BQ16 436 aa6.34□□□□□ -1.39
SMG1-207ENST00000563235 RIMBP3CA6NJZ7 1639 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 RIMBP3BA6NNM3 1639 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 RIMBP3Q9UFD9 1639 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 DCAF1Q9Y4B6 1507 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 ERCC3P19447 782 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 APLP1P51693 650 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 UBA5Q9GZZ9 404 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 SH3BP5O60239 455 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 TSHZ1Q6ZSZ6 1077 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 MIER1Q8N108 512 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 GOPCQ9HD26 462 aa6.33□□□□□ -1.4
SMG1-207ENST00000563235 U2SURPO15042 1029 aaKnown RBP6.32□□□□□ -1.4
SMG1-207ENST00000563235 GABBR2O75899 941 aa6.32□□□□□ -1.4
SMG1-207ENST00000563235 CLEC4GQ6UXB4 293 aa6.32□□□□□ -1.4
SMG1-207ENST00000563235 FAN1Q9Y2M0 1017 aa6.32□□□□□ -1.4
SMG1-207ENST00000563235 PHF14O94880 888 aa6.32□□□□□ -1.4
SMG1-207ENST00000563235 RFX1P22670 979 aa6.32□□□□□ -1.4
SMG1-207ENST00000563235 MLLT3P42568 568 aaPredicted RBP6.32□□□□□ -1.4
SMG1-207ENST00000563235 MAF1Q9H063 256 aa6.32□□□□□ -1.4
SMG1-207ENST00000563235 TBC1D12O60347 775 aa6.31□□□□□ -1.4
SMG1-207ENST00000563235 USTQ9Y2C2 406 aa6.31□□□□□ -1.4
SMG1-207ENST00000563235 POM121CA8CG34 1229 aa6.3□□□□□ -1.4
SMG1-207ENST00000563235 SOX12O15370 315 aa6.3□□□□□ -1.4
SMG1-207ENST00000563235 GIPC2Q8TF65 315 aa6.3□□□□□ -1.4
SMG1-207ENST00000563235 SMYD5Q6GMV2 418 aa6.3□□□□□ -1.4
SMG1-207ENST00000563235 CALR3Q96L12 384 aaKnown RBP6.29□□□□□ -1.4
SMG1-207ENST00000563235 PBXIP1Q96AQ6 731 aa6.29□□□□□ -1.4
SMG1-207ENST00000563235 SPACA7Q96KW9 195 aa6.29□□□□□ -1.4
SMG1-207ENST00000563235 BCL2L13Q9BXK5 485 aa6.29□□□□□ -1.4
SMG1-207ENST00000563235 TBC1D2Q9BYX2 928 aa6.29□□□□□ -1.4
SMG1-207ENST00000563235 CHPF2Q9P2E5 772 aa6.29□□□□□ -1.4
SMG1-207ENST00000563235 LNPKQ9C0E8 428 aa6.29□□□□□ -1.4
SMG1-207ENST00000563235 METTL14Q9HCE5 456 aaKnown RBP6.29□□□□□ -1.4
SMG1-207ENST00000563235 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.28□□□□□ -1.4
SMG1-207ENST00000563235 SSFA2P28290 1259 aa6.28□□□□□ -1.4
SMG1-207ENST00000563235 GTF2E1P29083 439 aaPredicted RBP6.28□□□□□ -1.4
SMG1-207ENST00000563235 RHBDL3P58872 404 aa6.28□□□□□ -1.4
SMG1-207ENST00000563235 EGFLAMQ63HQ2 1017 aa6.28□□□□□ -1.4
SMG1-207ENST00000563235 GLMNQ92990 594 aa6.28□□□□□ -1.4
SMG1-207ENST00000563235 RYDENQ9NUL5 291 aaKnown RBP6.28□□□□□ -1.4
SMG1-207ENST00000563235 NLGN1Q8N2Q7 840 aa6.28□□□□□ -1.4
SMG1-207ENST00000563235 PCMTD1Q96MG8 357 aaPredicted RBP6.28□□□□□ -1.4
SMG1-207ENST00000563235 SRPK2P78362 688 aaKnown RBP6.27□□□□□ -1.41
SMG1-207ENST00000563235 CCDC184Q52MB2 194 aa6.27□□□□□ -1.41
SMG1-207ENST00000563235 CCDC181Q5TID7 509 aa6.27□□□□□ -1.41
SMG1-207ENST00000563235 C11orf96Q7Z7L8 435 aa6.27□□□□□ -1.41
SMG1-207ENST00000563235 MAGEC2Q9UBF1 373 aaPredicted RBP6.27□□□□□ -1.41
SMG1-207ENST00000563235 ARID4AP29374 1257 aaPredicted RBP6.27□□□□□ -1.41
SMG1-207ENST00000563235 TAGLNQ01995 201 aaKnown RBP6.27□□□□□ -1.41
SMG1-207ENST00000563235 CHADLQ6NUI6 762 aa6.27□□□□□ -1.41
SMG1-207ENST00000563235 hCG_2014768A0A024R1R8 64 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 EPB41L2O43491 1005 aaKnown RBP6.26□□□□□ -1.41
SMG1-207ENST00000563235 CSB-PGBD3P0DP91 1061 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 SF3A1Q15459 793 aaKnown RBP6.26□□□□□ -1.41
SMG1-207ENST00000563235 PTPROQ16827 1216 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 SDR16C5Q8N3Y7 309 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 RECKO95980 971 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 BDNFP23560 247 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 GNL3LQ9NVN8 582 aaKnown RBP6.26□□□□□ -1.41
SMG1-207ENST00000563235 FARP1Q9Y4F1 1045 aaPredicted RBP6.26□□□□□ -1.41
SMG1-207ENST00000563235 CCDC96Q2M329 555 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 SNRKQ9NRH2 765 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 STAG3Q9UJ98 1225 aa6.26□□□□□ -1.41
SMG1-207ENST00000563235 TMEM88BA6NKF7 163 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 MS4A1P11836 297 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 VRTNQ9H8Y1 702 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 EXOC5O00471 708 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 VGFO15240 615 aaPredicted RBP6.25□□□□□ -1.41
SMG1-207ENST00000563235 GPR37O15354 613 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 POLD1P28340 1107 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 GYS2P54840 703 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 IGBP1P78318 339 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 C4orf46Q504U0 113 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 KCNB2Q92953 911 aa6.25□□□□□ -1.41
SMG1-207ENST00000563235 CCDC102AQ96A19 550 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 136.3 ms