RNA–Protein interactions for RNA: ENST00000562866.1

VPS9D1-AS1-202, VPS9D1 antisense RNA 1, humanhuman

TSL 2 BASIC

Gene VPS9D1-AS1, Length 1,753 nt, Biotype antisense RNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-AS1-202ENST00000562866 GGT6Q6P531 493 aa28.98■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 ADGRB3O60242 1522 aa28.98■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 PARD3Q8TEW0 1356 aa28.96■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 PER1O15534 1290 aaPredicted RBP28.96■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 SLC24A1O60721 1099 aa28.96■■■□□ 2.23
VPS9D1-AS1-202ENST00000562866 PNISRQ8TF01 805 aaKnown RBP28.95■■■□□ 2.22
VPS9D1-AS1-202ENST00000562866 NRXN1Q9ULB1 1477 aa28.95■■■□□ 2.22
VPS9D1-AS1-202ENST00000562866 MROH2AA6NES4 1674 aa28.95■■■□□ 2.22
VPS9D1-AS1-202ENST00000562866 CAMSAP1Q5T5Y3 1602 aa28.94■■■□□ 2.22
VPS9D1-AS1-202ENST00000562866 ZC3H13Q5T200 1668 aaKnown RBP28.91■■■□□ 2.22
VPS9D1-AS1-202ENST00000562866 NLRP13Q86W25 1043 aa28.9■■■□□ 2.22
VPS9D1-AS1-202ENST00000562866 PANK3Q9H999 370 aa28.9■■■□□ 2.22
VPS9D1-AS1-202ENST00000562866 RPGRIP1LQ68CZ1 1315 aa28.89■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 ADGRF5Q8IZF2 1346 aa28.88■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 LRPPRCP42704 1394 aaKnown RBP28.87■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 DIP2BQ9P265 1576 aa28.87■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 NOS1P29475 1434 aa28.87■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 ARHGAP31Q2M1Z3 1444 aa28.87■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 ZMYM4Q5VZL5 1548 aa28.87■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 SYNMO15061 1565 aa28.87■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 SETBP1Q9Y6X0 1596 aa28.85■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 CFAP70Q5T0N1 1121 aa28.85■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 CHGAP10645 457 aaKnown RBP28.83■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 BCANQ96GW7 911 aa28.83■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 PPLO60437 1756 aa28.83■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 FAM69CQ0P6D2 419 aa28.83■■■□□ 2.21
VPS9D1-AS1-202ENST00000562866 ERICH6BQ5W0A0 696 aa28.82■■■□□ 2.2
VPS9D1-AS1-202ENST00000562866 YEATS2Q9ULM3 1422 aa28.82■■■□□ 2.2
VPS9D1-AS1-202ENST00000562866 PIK3C2BO00750 1634 aa28.81■■■□□ 2.2
VPS9D1-AS1-202ENST00000562866 SMG6Q86US8 1419 aaKnown RBP28.8■■■□□ 2.2
VPS9D1-AS1-202ENST00000562866 KDM5AP29375 1690 aaKnown RBP28.79■■■□□ 2.2
VPS9D1-AS1-202ENST00000562866 MYO3AQ8NEV4 1616 aa28.78■■■□□ 2.2
VPS9D1-AS1-202ENST00000562866 PIK3C2GO75747 1445 aa28.78■■■□□ 2.2
VPS9D1-AS1-202ENST00000562866 SIGLEC1Q9BZZ2 1709 aa28.77■■■□□ 2.2
VPS9D1-AS1-202ENST00000562866 CC2D1BQ5T0F9 858 aaKnown RBP28.76■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 INSRP06213 1382 aa28.75■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 SBNO2Q9Y2G9 1366 aa28.75■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 KNSTRNQ9Y448 316 aa28.75■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 CFAP65Q6ZU64 1925 aaKnown RBP28.75■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 C14orf93Q9H972 538 aaKnown RBP28.74■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 REREQ9P2R6 1566 aa28.71■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 MYOM1P52179 1685 aa28.71■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 NUDCQ9Y266 331 aa28.71■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 ERVK-7P63135 1459 aa28.7■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 DNAJC5Q9H3Z4 198 aa28.7■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 SLC52A1Q9NWF4 448 aa28.7■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 NPC1L1Q9UHC9 1359 aa28.7■■■□□ 2.19
VPS9D1-AS1-202ENST00000562866 ASXL1Q8IXJ9 1541 aa28.69■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 VGFO15240 615 aaPredicted RBP28.68■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 CENPJQ9HC77 1338 aaPredicted RBP28.66■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 ADGRB1O14514 1584 aa28.66■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 NEXMIFQ5QGS0 1516 aa28.66■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 PPP6R1Q9UPN7 881 aa28.65■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 AGLP35573 1532 aa28.65■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 AMER1Q5JTC6 1135 aaPredicted RBP28.65■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 PREX1Q8TCU6 1659 aa28.64■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 TSPOAP1O95153 1857 aa28.64■■■□□ 2.18
VPS9D1-AS1-202ENST00000562866 ZFYVE9O95405 1425 aa28.63■■■□□ 2.17
VPS9D1-AS1-202ENST00000562866 IDI1Q13907 227 aa28.6■■■□□ 2.17
VPS9D1-AS1-202ENST00000562866 BLMP54132 1417 aaPredicted RBP28.59■■■□□ 2.17
VPS9D1-AS1-202ENST00000562866 IRX6P78412 446 aaPredicted RBP28.58■■■□□ 2.17
VPS9D1-AS1-202ENST00000562866 PDE3BQ13370 1112 aa28.58■■■□□ 2.17
VPS9D1-AS1-202ENST00000562866 QRICH2Q9H0J4 1663 aa28.58■■■□□ 2.17
VPS9D1-AS1-202ENST00000562866 PPP2R1AP30153 589 aa28.57■■■□□ 2.16
VPS9D1-AS1-202ENST00000562866 PPP4R2Q9NY27 417 aa28.57■■■□□ 2.16
VPS9D1-AS1-202ENST00000562866 TRAK1Q9UPV9 953 aa28.57■■■□□ 2.16
VPS9D1-AS1-202ENST00000562866 TMEM131LA2VDJ0 1609 aa28.55■■■□□ 2.16
VPS9D1-AS1-202ENST00000562866 RNF123Q5XPI4 1314 aa28.53■■■□□ 2.16
VPS9D1-AS1-202ENST00000562866 TSHZ2Q9NRE2 1034 aa28.52■■■□□ 2.16
VPS9D1-AS1-202ENST00000562866 TMEM132EQ6IEE7 984 aa28.51■■■□□ 2.15
VPS9D1-AS1-202ENST00000562866 PUS7Q96PZ0 661 aaKnown RBP28.51■■■□□ 2.15
VPS9D1-AS1-202ENST00000562866 ARHGEF40Q8TER5 1519 aa28.47■■■□□ 2.15
VPS9D1-AS1-202ENST00000562866 ARHGEF28Q8N1W1 1705 aaKnown RBP28.47■■■□□ 2.15
VPS9D1-AS1-202ENST00000562866 WDR43Q15061 677 aaKnown RBP eCLIP28.46■■■□□ 2.15
VPS9D1-AS1-202ENST00000562866 KIF13AQ9H1H9 1805 aa28.46■■■□□ 2.15
VPS9D1-AS1-202ENST00000562866 MYO5BQ9ULV0 1848 aa28.45■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 NUTM2DQ5VT03 806 aaPredicted RBP28.45■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 EVC2Q86UK5 1308 aa28.44■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 CLTCQ00610 1675 aaKnown RBP28.43■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 CARD14Q9BXL6 1004 aa28.43■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 SENP3-EIF4A1A0A087X0R7 540 aa28.41■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 FBXO31Q5XUX0 539 aaPredicted RBP28.41■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 SPATA31D1Q6ZQQ2 1576 aa28.41■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 ADAMTS8Q9UP79 889 aa28.4■■■□□ 2.14
VPS9D1-AS1-202ENST00000562866 USP32Q8NFA0 1604 aa28.38■■■□□ 2.13
VPS9D1-AS1-202ENST00000562866 STAG3Q9UJ98 1225 aa28.37■■■□□ 2.13
VPS9D1-AS1-202ENST00000562866 NSD3Q9BZ95 1437 aa28.36■■■□□ 2.13
VPS9D1-AS1-202ENST00000562866 SALL2Q9Y467 1007 aaPredicted RBP28.36■■■□□ 2.13
VPS9D1-AS1-202ENST00000562866 TULP4Q9NRJ4 1543 aa28.35■■■□□ 2.13
VPS9D1-AS1-202ENST00000562866 SLC12A5Q9H2X9 1139 aa28.32■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 RCAN3Q9UKA8 241 aa28.32■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 NINLQ9Y2I6 1382 aa28.32■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 YTHDC2Q9H6S0 1430 aaKnown RBP28.3■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 ALKQ9UM73 1620 aa28.3■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 A2ML1A8K2U0 1454 aa28.3■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 ANKRD36BQ8N2N9 1353 aa28.29■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 PTPRMP28827 1452 aa28.29■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 ESF1Q9H501 851 aaKnown RBP28.29■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 POLR3AO14802 1390 aaPredicted RBP28.28■■■□□ 2.12
VPS9D1-AS1-202ENST00000562866 CGNL1Q0VF96 1302 aa28.28■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms