RNA–Protein interactions for RNA: ENST00000562542.1

KATNB1-202, Transcript of katanin regulatory subunit B1, humanhuman

TSL 2

Gene KATNB1, Length 512 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KATNB1-202ENST00000562542 DAPK1P53355 1430 aa28.96■■■□□ 2.23
KATNB1-202ENST00000562542 PPP1R15AO75807 674 aaPredicted RBP28.96■■■□□ 2.23
KATNB1-202ENST00000562542 ZNF772Q68DY9 489 aaPredicted RBP28.96■■■□□ 2.23
KATNB1-202ENST00000562542 SLC52A1Q9NWF4 448 aa28.96■■■□□ 2.23
KATNB1-202ENST00000562542 NOS1P29475 1434 aa28.95■■■□□ 2.23
KATNB1-202ENST00000562542 PTPN23Q9H3S7 1636 aa28.95■■■□□ 2.23
KATNB1-202ENST00000562542 UPF1Q92900 1129 aaKnown RBP eCLIP28.95■■■□□ 2.22
KATNB1-202ENST00000562542 CHIC2Q9UKJ5 165 aa28.95■■■□□ 2.22
KATNB1-202ENST00000562542 SPATA31A6Q5VVP1 1343 aa28.94■■■□□ 2.22
KATNB1-202ENST00000562542 COL16A1Q07092 1604 aaPredicted RBP28.94■■■□□ 2.22
KATNB1-202ENST00000562542 ANKRD30AQ9BXX3 1397 aa28.93■■■□□ 2.22
KATNB1-202ENST00000562542 LRP6O75581 1613 aa28.93■■■□□ 2.22
KATNB1-202ENST00000562542 PLEKHG1Q9ULL1 1385 aa28.9■■■□□ 2.22
KATNB1-202ENST00000562542 FGD6Q6ZV73 1430 aa28.9■■■□□ 2.22
KATNB1-202ENST00000562542 HDGFP51858 240 aaKnown RBP28.89■■■□□ 2.22
KATNB1-202ENST00000562542 CHD2O14647 1828 aaKnown RBP28.87■■■□□ 2.21
KATNB1-202ENST00000562542 RIMS2Q9UQ26 1411 aa28.86■■■□□ 2.21
KATNB1-202ENST00000562542 ZFYVE9O95405 1425 aa28.86■■■□□ 2.21
KATNB1-202ENST00000562542 ATF3P18847 181 aa28.85■■■□□ 2.21
KATNB1-202ENST00000562542 RXRBP28702 533 aa28.84■■■□□ 2.21
KATNB1-202ENST00000562542 CADPS2Q86UW7 1296 aa28.84■■■□□ 2.21
KATNB1-202ENST00000562542 NCOA3Q9Y6Q9 1424 aa28.84■■■□□ 2.21
KATNB1-202ENST00000562542 APLP2Q06481 763 aa28.82■■■□□ 2.2
KATNB1-202ENST00000562542 TBX22Q9Y458 520 aa28.82■■■□□ 2.2
KATNB1-202ENST00000562542 AHDC1Q5TGY3 1603 aaPredicted RBP28.8■■■□□ 2.2
KATNB1-202ENST00000562542 RPRD2Q5VT52 1461 aaKnown RBP28.8■■■□□ 2.2
KATNB1-202ENST00000562542 NUTM2BA6NNL0 878 aaPredicted RBP28.8■■■□□ 2.2
KATNB1-202ENST00000562542 NUTM2EB1AL46 878 aaPredicted RBP28.8■■■□□ 2.2
KATNB1-202ENST00000562542 CHGAP10645 457 aaKnown RBP28.8■■■□□ 2.2
KATNB1-202ENST00000562542 NUTM2AQ8IVF1 878 aaPredicted RBP28.8■■■□□ 2.2
KATNB1-202ENST00000562542 SHPRHQ149N8 1683 aa28.8■■■□□ 2.2
KATNB1-202ENST00000562542 MYO5BQ9ULV0 1848 aa28.79■■■□□ 2.2
KATNB1-202ENST00000562542 C19orf44Q9H6X5 657 aa28.79■■■□□ 2.2
KATNB1-202ENST00000562542 GCC2Q8IWJ2 1684 aa28.79■■■□□ 2.2
KATNB1-202ENST00000562542 LOC105371045A0A1W2PR82 267 aa28.78■■■□□ 2.2
KATNB1-202ENST00000562542 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.77■■■□□ 2.2
KATNB1-202ENST00000562542 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.77■■■□□ 2.2
KATNB1-202ENST00000562542 NUTM2DQ5VT03 806 aaPredicted RBP28.76■■■□□ 2.19
KATNB1-202ENST00000562542 TMEM131LA2VDJ0 1609 aa28.74■■■□□ 2.19
KATNB1-202ENST00000562542 BRINP3Q76B58 766 aa28.71■■■□□ 2.19
KATNB1-202ENST00000562542 CDK12Q9NYV4 1490 aaPredicted RBP28.71■■■□□ 2.19
KATNB1-202ENST00000562542 AFF2P51816 1311 aa28.7■■■□□ 2.19
KATNB1-202ENST00000562542 ADAMTS13Q76LX8 1427 aa28.7■■■□□ 2.19
KATNB1-202ENST00000562542 DIP2AQ14689 1571 aa28.7■■■□□ 2.18
KATNB1-202ENST00000562542 ANKRD50Q9ULJ7 1429 aa28.69■■■□□ 2.18
KATNB1-202ENST00000562542 PIK3R4Q99570 1358 aa28.69■■■□□ 2.18
KATNB1-202ENST00000562542 ADGRL2O95490 1459 aa28.69■■■□□ 2.18
KATNB1-202ENST00000562542 AMOTL2Q9Y2J4 779 aa28.66■■■□□ 2.18
KATNB1-202ENST00000562542 FAM50AQ14320 339 aaKnown RBP28.65■■■□□ 2.18
KATNB1-202ENST00000562542 TRPM2O94759 1503 aa28.64■■■□□ 2.17
KATNB1-202ENST00000562542 C8orf37Q96NL8 207 aa28.62■■■□□ 2.17
KATNB1-202ENST00000562542 ASXL1Q8IXJ9 1541 aa28.62■■■□□ 2.17
KATNB1-202ENST00000562542 DCCP43146 1447 aa28.6■■■□□ 2.17
KATNB1-202ENST00000562542 QTRT2Q9H974 415 aaKnown RBP28.59■■■□□ 2.17
KATNB1-202ENST00000562542 RGS12O14924 1447 aa28.59■■■□□ 2.17
KATNB1-202ENST00000562542 SETD5Q9C0A6 1442 aa28.59■■■□□ 2.17
KATNB1-202ENST00000562542 LRRC59Q96AG4 307 aaKnown RBP28.58■■■□□ 2.17
KATNB1-202ENST00000562542 PTPRUQ92729 1446 aa28.58■■■□□ 2.17
KATNB1-202ENST00000562542 RBM6P78332 1123 aaKnown RBP28.57■■■□□ 2.16
KATNB1-202ENST00000562542 MST1RQ04912 1400 aa28.53■■■□□ 2.16
KATNB1-202ENST00000562542 E9PCH4 1651 aa28.53■■■□□ 2.16
KATNB1-202ENST00000562542 NHSL1Q5SYE7 1610 aa28.52■■■□□ 2.16
KATNB1-202ENST00000562542 UNC13BO14795 1591 aa28.52■■■□□ 2.16
KATNB1-202ENST00000562542 DDX17Q92841 729 aaKnown RBP28.51■■■□□ 2.15
KATNB1-202ENST00000562542 PNPLA6Q8IY17 1366 aa28.5■■■□□ 2.15
KATNB1-202ENST00000562542 NGLY1Q96IV0 654 aa28.49■■■□□ 2.15
KATNB1-202ENST00000562542 ADAMTS2O95450 1211 aa28.48■■■□□ 2.15
KATNB1-202ENST00000562542 SRCAPQ6ZRS2 3230 aa28.47■■■□□ 2.15
KATNB1-202ENST00000562542 XRN1Q8IZH2 1706 aaKnown RBP28.47■■■□□ 2.15
KATNB1-202ENST00000562542 ATAD2Q6PL18 1390 aa28.45■■■□□ 2.14
KATNB1-202ENST00000562542 ZNF326Q5BKZ1 582 aaKnown RBP28.43■■■□□ 2.14
KATNB1-202ENST00000562542 IQGAP3Q86VI3 1631 aa28.42■■■□□ 2.14
KATNB1-202ENST00000562542 ADGRL3Q9HAR2 1447 aa28.42■■■□□ 2.14
KATNB1-202ENST00000562542 SETBP1Q9Y6X0 1596 aa28.41■■■□□ 2.14
KATNB1-202ENST00000562542 METP08581 1390 aa28.41■■■□□ 2.14
KATNB1-202ENST00000562542 NRXN3Q9Y4C0 1643 aa28.41■■■□□ 2.14
KATNB1-202ENST00000562542 FOXD1Q16676 465 aa28.41■■■□□ 2.14
KATNB1-202ENST00000562542 NUP155O75694 1391 aa28.39■■■□□ 2.14
KATNB1-202ENST00000562542 ZRANB1Q9UGI0 708 aa28.38■■■□□ 2.13
KATNB1-202ENST00000562542 USP21Q9UK80 565 aa28.38■■■□□ 2.13
KATNB1-202ENST00000562542 TRPC5Q9UL62 973 aaPredicted RBP28.35■■■□□ 2.13
KATNB1-202ENST00000562542 NALCNQ8IZF0 1738 aa28.34■■■□□ 2.13
KATNB1-202ENST00000562542 ROCK1Q13464 1354 aa28.32■■■□□ 2.12
KATNB1-202ENST00000562542 C1orf167Q5SNV9 1468 aa28.32■■■□□ 2.12
KATNB1-202ENST00000562542 PTCH1Q13635 1447 aa28.26■■■□□ 2.12
KATNB1-202ENST00000562542 SOS2Q07890 1332 aaPredicted RBP28.26■■■□□ 2.11
KATNB1-202ENST00000562542 ORAI2Q96SN7 254 aa28.26■■■□□ 2.11
KATNB1-202ENST00000562542 SPHKAPQ2M3C7 1700 aa28.26■■■□□ 2.11
KATNB1-202ENST00000562542 FNBP4Q8N3X1 1017 aaPredicted RBP28.25■■■□□ 2.11
KATNB1-202ENST00000562542 ITGAEP38570 1179 aa28.24■■■□□ 2.11
KATNB1-202ENST00000562542 ATRNO75882 1429 aa28.24■■■□□ 2.11
KATNB1-202ENST00000562542 LAMC1P11047 1609 aa28.22■■■□□ 2.11
KATNB1-202ENST00000562542 CCDC125Q86Z20 511 aa28.21■■■□□ 2.11
KATNB1-202ENST00000562542 NEXMIFQ5QGS0 1516 aa28.2■■■□□ 2.1
KATNB1-202ENST00000562542 EP400Q96L91 3159 aa28.17■■■□□ 2.1
KATNB1-202ENST00000562542 ROBO2Q9HCK4 1378 aa28.16■■■□□ 2.1
KATNB1-202ENST00000562542 COL22A1Q8NFW1 1626 aaPredicted RBP28.14■■■□□ 2.1
KATNB1-202ENST00000562542 CLTCL1P53675 1640 aa28.14■■■□□ 2.09
KATNB1-202ENST00000562542 MYOM2P54296 1465 aa28.12■■■□□ 2.09
KATNB1-202ENST00000562542 NPHP3Q7Z494 1330 aa28.12■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms